RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 BUB1BO60566 1050 aaPredicted RBP13.2□□□□□ -0.3
COL11A1-211ENST00000635193 TUBB8Q3ZCM7 444 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 IFNL2Q8IZJ0 200 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 BANK1Q8NDB2 785 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 SMC6Q96SB8 1091 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 CCDC77Q9BR77 488 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 CARD6Q9BX69 1037 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 CBX8Q9HC52 389 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 ANKIB1Q9P2G1 1089 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 ARHGAP25P42331 645 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 CNGA4Q8IV77 575 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 ESR2Q92731 530 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 AKR1B15C9JRZ8 316 aaPredicted RBP13.2□□□□□ -0.3
COL11A1-211ENST00000635193 GADD45BO75293 160 aaPredicted RBP13.2□□□□□ -0.3
COL11A1-211ENST00000635193 CCDC172P0C7W6 258 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 EIF4A2Q14240 407 aaKnown RBP13.2□□□□□ -0.3
COL11A1-211ENST00000635193 IFIT1BQ5T764 474 aaKnown RBP13.2□□□□□ -0.3
COL11A1-211ENST00000635193 XAGE3Q8WTP9 111 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 IFT81Q8WYA0 676 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 MMRN2Q9H8L6 949 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 IKBKGQ9Y6K9 419 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 STXBP4Q6ZWJ1 553 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 PPP1R14CQ8TAE6 165 aa13.2□□□□□ -0.3
COL11A1-211ENST00000635193 GOLGA6CA6NDK9 693 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 GOLGA6DP0CG33 693 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 ASIC1P78348 528 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 ZBTB16Q05516 673 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 TSC1Q92574 1164 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 GOLGA6AQ9NYA3 693 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 ELP1O95163 1332 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 IL15P40933 162 aaPredicted RBP13.19□□□□□ -0.3
COL11A1-211ENST00000635193 CHMP4BP1P59074 171 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 SETDB1Q15047 1291 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 UTP14CQ5TAP6 766 aaKnown RBP13.19□□□□□ -0.3
COL11A1-211ENST00000635193 WDHD1O75717 1129 aaPredicted RBP13.19□□□□□ -0.3
COL11A1-211ENST00000635193 PCK1P35558 622 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 LMBR1LQ6UX01 489 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 NUTM2AQ8IVF1 878 aaPredicted RBP13.19□□□□□ -0.3
COL11A1-211ENST00000635193 PHACTR3Q96KR7 559 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 NAP1L3Q99457 506 aaPredicted RBP13.19□□□□□ -0.3
COL11A1-211ENST00000635193 TMEM63CQ9P1W3 806 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 ATP11AP98196 1134 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 COPS6Q7L5N1 327 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 IFT74Q96LB3 600 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 CFAP57Q96MR6 1250 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 FEZ2Q9UHY8 353 aaPredicted RBP13.19□□□□□ -0.3
COL11A1-211ENST00000635193 COL17A1Q9UMD9 1497 aaPredicted RBP13.19□□□□□ -0.3
COL11A1-211ENST00000635193 ATP6V1AP38606 617 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 TUBB2AQ13885 445 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 FMNL3Q8IVF7 1028 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 TUBB2BQ9BVA1 445 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 LUC7L2Q9Y383 392 aaKnown RBP13.19□□□□□ -0.3
COL11A1-211ENST00000635193 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
COL11A1-211ENST00000635193 ARHGEF12Q9NZN5 1544 aa13.18□□□□□ -0.3
COL11A1-211ENST00000635193 CD109Q6YHK3 1445 aa13.18□□□□□ -0.3
COL11A1-211ENST00000635193 RNF113AO15541 343 aaKnown RBP13.18□□□□□ -0.3
COL11A1-211ENST00000635193 RPS6KB1P23443 525 aa13.18□□□□□ -0.3
COL11A1-211ENST00000635193 SNX14Q9Y5W7 946 aa13.18□□□□□ -0.3
COL11A1-211ENST00000635193 ATP2B3Q16720 1220 aa13.18□□□□□ -0.3
COL11A1-211ENST00000635193 MTHFSDQ2M296 383 aaKnown RBP13.18□□□□□ -0.3
COL11A1-211ENST00000635193 SLC9C2Q5TAH2 1124 aa13.18□□□□□ -0.3
COL11A1-211ENST00000635193 TBC1D5Q92609 795 aa13.18□□□□□ -0.3
COL11A1-211ENST00000635193 PLVAPQ9BX97 442 aa13.18□□□□□ -0.3
COL11A1-211ENST00000635193 MAP3K9P80192 1104 aa13.18□□□□□ -0.3
COL11A1-211ENST00000635193 SYCP3Q8IZU3 236 aa13.18□□□□□ -0.3
COL11A1-211ENST00000635193 PPP1R9BQ96SB3 815 aa13.18□□□□□ -0.3
COL11A1-211ENST00000635193 TMOD2Q9NZR1 351 aa13.18□□□□□ -0.3
COL11A1-211ENST00000635193 IQCGQ9H095 443 aaKnown RBP13.18□□□□□ -0.3
COL11A1-211ENST00000635193 FOXO3O43524 673 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 KRI1Q8N9T8 703 aaKnown RBP13.17□□□□□ -0.3
COL11A1-211ENST00000635193 LINS1Q8NG48 757 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 TCOF1Q13428 1488 aaKnown RBP13.17□□□□□ -0.3
COL11A1-211ENST00000635193 TBCAO75347 108 aaKnown RBP13.17□□□□□ -0.3
COL11A1-211ENST00000635193 MIPOL1Q8TD10 442 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 KDM5BQ9UGL1 1544 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 CCDC122Q5T0U0 273 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 SLF2Q8IX21 1173 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 LMBR1Q8WVP7 490 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 IMPACTQ9P2X3 320 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 PPIP5K1Q6PFW1 1433 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 TLDC2A0PJX2 215 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 BICDL2A1A5D9 508 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 FAM173BQ6P4H8 233 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 CDC5LQ99459 802 aaKnown RBP13.17□□□□□ -0.3
COL11A1-211ENST00000635193 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
COL11A1-211ENST00000635193 CRNKL1Q9BZJ0 848 aaKnown RBP13.17□□□□□ -0.3
COL11A1-211ENST00000635193 EHMT1Q9H9B1 1298 aa13.17□□□□□ -0.3
COL11A1-211ENST00000635193 PRPHP41219 470 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 SLC4A8Q2Y0W8 1093 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 PPP4R3AQ6IN85 833 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 PUS7Q96PZ0 661 aaKnown RBP13.16□□□□□ -0.3
COL11A1-211ENST00000635193 BLMP54132 1417 aaPredicted RBP13.16□□□□□ -0.3
COL11A1-211ENST00000635193 SMIM23A6NLE4 172 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 TNNC1P63316 161 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 FANCCQ00597 558 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 NAPGQ99747 312 aaPredicted RBP13.16□□□□□ -0.3
COL11A1-211ENST00000635193 KRT13P13646 458 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 HPDP32754 393 aaPredicted RBP13.16□□□□□ -0.3
COL11A1-211ENST00000635193 KRT2P35908 639 aa13.16□□□□□ -0.3
COL11A1-211ENST00000635193 ARID5AQ03989 594 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms