RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 MTMR6Q9Y217 621 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 DOCK2Q92608 1830 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 SCN7AQ01118 1682 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 ZNF804BA4D1E1 1349 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 PATL2C9JE40 543 aaKnown RBP6.59□□□□□ -1.35
NEK3-211ENST00000629912 ZNF213O14771 459 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 GPAA1O43292 621 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 IGSF3O75054 1194 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 F13A1P00488 732 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 PDE6AP16499 860 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 GTF2E1P29083 439 aaPredicted RBP6.59□□□□□ -1.35
NEK3-211ENST00000629912 TM4SF1P30408 202 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 KCNQ4P56696 695 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 ZNF445P59923 1031 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 RPS8P62241 208 aaKnown RBP6.59□□□□□ -1.35
NEK3-211ENST00000629912 MAP3K12Q12852 859 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 MAPK8IP2Q13387 824 aaPredicted RBP6.59□□□□□ -1.35
NEK3-211ENST00000629912 LARP1BQ659C4 914 aaKnown RBP6.59□□□□□ -1.35
NEK3-211ENST00000629912 TMED8Q6PL24 325 aaPredicted RBP6.59□□□□□ -1.35
NEK3-211ENST00000629912 PI16Q6UXB8 463 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 FBXO33Q7Z6M2 555 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 RGS22Q8NE09 1264 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 SMARCC2Q8TAQ2 1214 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 GTF3C6Q969F1 213 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 STRBPQ96SI9 672 aaKnown RBP6.59□□□□□ -1.35
NEK3-211ENST00000629912 GZF1Q9H116 711 aaPredicted RBP6.59□□□□□ -1.35
NEK3-211ENST00000629912 QTRT2Q9H974 415 aaKnown RBP6.59□□□□□ -1.35
NEK3-211ENST00000629912 GNL3LQ9NVN8 582 aaKnown RBP6.59□□□□□ -1.35
NEK3-211ENST00000629912 MINPP1Q9UNW1 487 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 CASZ1Q86V15 1759 aa6.59□□□□□ -1.35
NEK3-211ENST00000629912 COL24A1Q17RW2 1714 aa6.59□□□□□ -1.36
NEK3-211ENST00000629912 ZMYM6O95789 1325 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 ZNF532Q9HCE3 1301 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 SEMA3EO15041 775 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 GNPATO15228 680 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 IDH1O75874 414 aaKnown RBP6.58□□□□□ -1.36
NEK3-211ENST00000629912 XRCC6P12956 609 aaKnown RBP eCLIP6.58□□□□□ -1.36
NEK3-211ENST00000629912 GNAT2P19087 354 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 NCLP19338 710 aaKnown RBP6.58□□□□□ -1.36
NEK3-211ENST00000629912 MCM5P33992 734 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 RFC4P35249 363 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 BCAMP50895 628 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 RASGRF1Q13972 1273 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 CSPP1Q1MSJ5 1256 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 SLC27A3Q5K4L6 730 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 TTLL5Q6EMB2 1281 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 FAM196AQ6ZSG2 479 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 C3orf67Q6ZVT6 689 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 USP48Q86UV5 1035 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 NBPF5PQ86XG9 351 aaPredicted RBP6.58□□□□□ -1.36
NEK3-211ENST00000629912 NCOA7Q8NI08 942 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 GPT2Q8TD30 523 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 ANKRD2Q9GZV1 360 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 SRP68Q9UHB9 627 aaKnown RBP6.58□□□□□ -1.36
NEK3-211ENST00000629912 A0A1B0GUL6 1792 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 TAF1P21675 1872 aa6.58□□□□□ -1.36
NEK3-211ENST00000629912 PDS5AQ29RF7 1337 aaKnown RBP6.57□□□□□ -1.36
NEK3-211ENST00000629912 PNPLA7Q6ZV29 1317 aa6.57□□□□□ -1.36
NEK3-211ENST00000629912 C4BP0C0L5 1744 aa6.57□□□□□ -1.36
NEK3-211ENST00000629912 A0A0G2JLW4 131 aa6.57□□□□□ -1.36
NEK3-211ENST00000629912 SNAP23O00161 211 aa6.57□□□□□ -1.36
NEK3-211ENST00000629912 PDIA3P30101 505 aaKnown RBP6.57□□□□□ -1.36
NEK3-211ENST00000629912 HMGN5P82970 282 aaKnown RBP6.57□□□□□ -1.36
NEK3-211ENST00000629912 FGD1P98174 961 aa6.57□□□□□ -1.36
NEK3-211ENST00000629912 CAVIN4Q5BKX8 364 aa6.57□□□□□ -1.36
NEK3-211ENST00000629912 FAM182BQ5T319 152 aa6.57□□□□□ -1.36
NEK3-211ENST00000629912 FOXD4L5Q5VV16 416 aaPredicted RBP6.57□□□□□ -1.36
NEK3-211ENST00000629912 MB21D2Q8IYB1 491 aaPredicted RBP6.57□□□□□ -1.36
NEK3-211ENST00000629912 FOXD4L4Q8WXT5 416 aaPredicted RBP6.57□□□□□ -1.36
NEK3-211ENST00000629912 CELF1Q92879 486 aaKnown RBP6.57□□□□□ -1.36
NEK3-211ENST00000629912 BRF1Q92994 677 aa6.57□□□□□ -1.36
NEK3-211ENST00000629912 FAM84BQ96KN1 310 aaPredicted RBP6.57□□□□□ -1.36
NEK3-211ENST00000629912 TCEANC2Q96MN5 208 aa6.57□□□□□ -1.36
NEK3-211ENST00000629912 MTA3Q9BTC8 594 aa6.57□□□□□ -1.36
NEK3-211ENST00000629912 WWC3Q9ULE0 1092 aa6.57□□□□□ -1.36
NEK3-211ENST00000629912 DENND2AQ9ULE3 1009 aa6.57□□□□□ -1.36
NEK3-211ENST00000629912 GSG1L2A8MUP6 293 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 UBE2HP62256 183 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 APOBRQ0VD83 1088 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 SCRN1Q12765 414 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 TRDNQ13061 729 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 ZSCAN23Q3MJ62 389 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 NAA16Q6N069 864 aaPredicted RBP6.56□□□□□ -1.36
NEK3-211ENST00000629912 BICDL1Q6ZP65 573 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 SMIM5Q71RC9 77 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 KRT27Q7Z3Y8 459 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 GAS2L3Q86XJ1 694 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 IFNL3Q8IZI9 196 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 MAGEB6Q8N7X4 407 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 AIDAQ96BJ3 306 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 ZSCAN16Q9H4T2 348 aaPredicted RBP6.56□□□□□ -1.36
NEK3-211ENST00000629912 GRPEL1Q9HAV7 217 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 LRRC4BQ9NT99 713 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 LEMD3Q9Y2U8 911 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 KIF3AQ9Y496 699 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 UBR3Q6ZT12 1888 aa6.56□□□□□ -1.36
NEK3-211ENST00000629912 COL4A1P02462 1669 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 ELP1O95163 1332 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 PRC1O43663 620 aa6.55□□□□□ -1.36
NEK3-211ENST00000629912 DHX16O60231 1041 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms