RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 ZAP70P43403 619 aa21.48■■□□□ 1.03
SPTAN1-217ENST00000629089 RILPL2Q969X0 211 aa21.48■■□□□ 1.03
SPTAN1-217ENST00000629089 SRCAPQ6ZRS2 3230 aa21.47■■□□□ 1.03
SPTAN1-217ENST00000629089 CHAF1AQ13111 956 aaPredicted RBP21.47■■□□□ 1.03
SPTAN1-217ENST00000629089 BMP2KLQ5H9B9 411 aa21.47■■□□□ 1.03
SPTAN1-217ENST00000629089 PODNQ7Z5L7 613 aa21.47■■□□□ 1.03
SPTAN1-217ENST00000629089 CNTROBQ8N137 903 aa21.47■■□□□ 1.03
SPTAN1-217ENST00000629089 PAG1Q9NWQ8 432 aa21.47■■□□□ 1.03
SPTAN1-217ENST00000629089 AKAP11Q9UKA4 1901 aa21.47■■□□□ 1.03
SPTAN1-217ENST00000629089 GOLIM4O00461 696 aa21.46■■□□□ 1.03
SPTAN1-217ENST00000629089 NIM1KQ8IY84 436 aa21.46■■□□□ 1.03
SPTAN1-217ENST00000629089 JDP2Q8WYK2 163 aa21.46■■□□□ 1.03
SPTAN1-217ENST00000629089 EDC3Q96F86 508 aaKnown RBP21.46■■□□□ 1.03
SPTAN1-217ENST00000629089 FBXW7Q969H0 707 aa21.45■■□□□ 1.02
SPTAN1-217ENST00000629089 JAG2Q9Y219 1238 aa21.45■■□□□ 1.02
SPTAN1-217ENST00000629089 COL1A1P02452 1464 aaPredicted RBP21.45■■□□□ 1.02
SPTAN1-217ENST00000629089 ZBTB22O15209 634 aa21.45■■□□□ 1.02
SPTAN1-217ENST00000629089 SDSP20132 328 aa21.45■■□□□ 1.02
SPTAN1-217ENST00000629089 TTF1Q15361 905 aaPredicted RBP21.45■■□□□ 1.02
SPTAN1-217ENST00000629089 EVI5LQ96CN4 794 aa21.45■■□□□ 1.02
SPTAN1-217ENST00000629089 PDS5AQ29RF7 1337 aaKnown RBP21.44■■□□□ 1.02
SPTAN1-217ENST00000629089 GRIN3BO60391 1043 aa21.44■■□□□ 1.02
SPTAN1-217ENST00000629089 CYP2E1P05181 493 aaPredicted RBP21.44■■□□□ 1.02
SPTAN1-217ENST00000629089 GTF2IP78347 998 aa21.44■■□□□ 1.02
SPTAN1-217ENST00000629089 ANTXR1Q9H6X2 564 aa21.44■■□□□ 1.02
SPTAN1-217ENST00000629089 LMNB1P20700 586 aa21.43■■□□□ 1.02
SPTAN1-217ENST00000629089 TTLL5Q6EMB2 1281 aa21.43■■□□□ 1.02
SPTAN1-217ENST00000629089 WDR66Q8TBY9 1149 aa21.43■■□□□ 1.02
SPTAN1-217ENST00000629089 CCDC88AQ3V6T2 1871 aa21.43■■□□□ 1.02
SPTAN1-217ENST00000629089 CHD4Q14839 1912 aa21.42■■□□□ 1.02
SPTAN1-217ENST00000629089 AK9Q5TCS8 1911 aa21.42■■□□□ 1.02
SPTAN1-217ENST00000629089 COL4A5P29400 1685 aa21.42■■□□□ 1.02
SPTAN1-217ENST00000629089 PRELPP51888 382 aa21.42■■□□□ 1.02
SPTAN1-217ENST00000629089 TBC1D9Q6ZT07 1266 aa21.42■■□□□ 1.02
SPTAN1-217ENST00000629089 FSD1Q9BTV5 496 aa21.42■■□□□ 1.02
SPTAN1-217ENST00000629089 ABCF2Q9UG63 623 aa21.42■■□□□ 1.02
SPTAN1-217ENST00000629089 ZNRF3Q9ULT6 936 aa21.42■■□□□ 1.02
SPTAN1-217ENST00000629089 YDJCA8MPS7 323 aa21.41■■□□□ 1.02
SPTAN1-217ENST00000629089 ZGPATQ8N5A5 531 aaKnown RBP21.41■■□□□ 1.02
SPTAN1-217ENST00000629089 FAM205AQ6ZU69 1335 aa21.41■■□□□ 1.02
SPTAN1-217ENST00000629089 KBTBD3Q8NAB2 608 aa21.4■■□□□ 1.02
SPTAN1-217ENST00000629089 TBC1D22AQ8WUA7 517 aa21.4■■□□□ 1.02
SPTAN1-217ENST00000629089 PIH1D3Q9NQM4 214 aaKnown RBP21.4■■□□□ 1.02
SPTAN1-217ENST00000629089 KCNQ5Q9NR82 932 aa21.4■■□□□ 1.02
SPTAN1-217ENST00000629089 LRP2BPQ9P2M1 347 aa21.4■■□□□ 1.02
SPTAN1-217ENST00000629089 USP17L3A6NCW0 530 aa21.39■■□□□ 1.02
SPTAN1-217ENST00000629089 USP17L4A6NCW7 530 aa21.39■■□□□ 1.02
SPTAN1-217ENST00000629089 IDH1O75874 414 aaKnown RBP21.39■■□□□ 1.02
SPTAN1-217ENST00000629089 MFSD14BQ5SR56 506 aa21.39■■□□□ 1.02
SPTAN1-217ENST00000629089 USP17L1Q7RTZ2 530 aa21.39■■□□□ 1.02
SPTAN1-217ENST00000629089 SBF1O95248 1867 aa21.39■■□□□ 1.01
SPTAN1-217ENST00000629089 STRIP1Q5VSL9 837 aa21.39■■□□□ 1.01
SPTAN1-217ENST00000629089 SCN9AQ15858 1988 aa21.38■■□□□ 1.01
SPTAN1-217ENST00000629089 SALL1Q9NSC2 1324 aa21.38■■□□□ 1.01
SPTAN1-217ENST00000629089 DCAF8L1A6NGE4 600 aa21.38■■□□□ 1.01
SPTAN1-217ENST00000629089 RAD17O75943 681 aa21.38■■□□□ 1.01
SPTAN1-217ENST00000629089 MAP3K12Q12852 859 aa21.38■■□□□ 1.01
SPTAN1-217ENST00000629089 LRRFIP1Q32MZ4 808 aaKnown RBP21.38■■□□□ 1.01
SPTAN1-217ENST00000629089 SPTY2D1Q68D10 685 aaPredicted RBP21.38■■□□□ 1.01
SPTAN1-217ENST00000629089 ERICH6Q7L0X2 663 aa21.38■■□□□ 1.01
SPTAN1-217ENST00000629089 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.38■■□□□ 1.01
SPTAN1-217ENST00000629089 RAI14Q9P0K7 980 aa21.38■■□□□ 1.01
SPTAN1-217ENST00000629089 RNF181Q9P0P0 153 aa21.38■■□□□ 1.01
SPTAN1-217ENST00000629089 DICER1Q9UPY3 1922 aaKnown RBP21.37■■□□□ 1.01
SPTAN1-217ENST00000629089 MYO5AQ9Y4I1 1855 aaKnown RBP21.37■■□□□ 1.01
SPTAN1-217ENST00000629089 LDHBP07195 334 aaKnown RBP21.36■■□□□ 1.01
SPTAN1-217ENST00000629089 EIF6P56537 245 aaKnown RBP21.36■■□□□ 1.01
SPTAN1-217ENST00000629089 DOCK2Q92608 1830 aa21.36■■□□□ 1.01
SPTAN1-217ENST00000629089 PSME4Q14997 1843 aa21.35■■□□□ 1.01
SPTAN1-217ENST00000629089 FZD9O00144 591 aa21.35■■□□□ 1.01
SPTAN1-217ENST00000629089 CDC45O75419 566 aa21.35■■□□□ 1.01
SPTAN1-217ENST00000629089 PRDX5P30044 214 aa21.35■■□□□ 1.01
SPTAN1-217ENST00000629089 DACT2Q5SW24 774 aa21.35■■□□□ 1.01
SPTAN1-217ENST00000629089 C9orf131Q5VYM1 1079 aa21.35■■□□□ 1.01
SPTAN1-217ENST00000629089 CIAPIN1Q6FI81 312 aa21.35■■□□□ 1.01
SPTAN1-217ENST00000629089 ZSCAN25Q6NSZ9 544 aa21.35■■□□□ 1.01
SPTAN1-217ENST00000629089 MXD3Q9BW11 206 aa21.35■■□□□ 1.01
SPTAN1-217ENST00000629089 HIP1O00291 1037 aa21.34■■□□□ 1.01
SPTAN1-217ENST00000629089 PSMD14O00487 310 aa21.34■■□□□ 1.01
SPTAN1-217ENST00000629089 FKBP1AP62942 108 aaKnown RBP21.34■■□□□ 1.01
SPTAN1-217ENST00000629089 CXCL9Q07325 125 aa21.34■■□□□ 1.01
SPTAN1-217ENST00000629089 SLC9C2Q5TAH2 1124 aa21.34■■□□□ 1.01
SPTAN1-217ENST00000629089 CASC1Q6TDU7 716 aa21.34■■□□□ 1.01
SPTAN1-217ENST00000629089 DZIP1Q86YF9 867 aaKnown RBP21.34■■□□□ 1.01
SPTAN1-217ENST00000629089 DIAPH3Q9NSV4 1193 aa21.34■■□□□ 1.01
SPTAN1-217ENST00000629089 RFX7Q2KHR2 1363 aa21.34■■□□□ 1.01
SPTAN1-217ENST00000629089 ZFYP08048 801 aaPredicted RBP21.34■■□□□ 1.01
SPTAN1-217ENST00000629089 TNIP1Q15025 636 aa21.34■■□□□ 1.01
SPTAN1-217ENST00000629089 MYH7P12883 1935 aa21.34■■□□□ 1.01
SPTAN1-217ENST00000629089 VIL1P09327 827 aaKnown RBP21.33■■□□□ 1
SPTAN1-217ENST00000629089 RSBN1LQ6PCB5 846 aaPredicted RBP21.33■■□□□ 1
SPTAN1-217ENST00000629089 CERS5Q8N5B7 392 aa21.33■■□□□ 1
SPTAN1-217ENST00000629089 MAGEB6Q8N7X4 407 aa21.33■■□□□ 1
SPTAN1-217ENST00000629089 SUGT1Q9Y2Z0 365 aa21.33■■□□□ 1
SPTAN1-217ENST00000629089 MYO3BQ8WXR4 1341 aa21.33■■□□□ 1
SPTAN1-217ENST00000629089 TIAM2Q8IVF5 1701 aa21.33■■□□□ 1
SPTAN1-217ENST00000629089 ZNF646O15015 1829 aaPredicted RBP21.33■■□□□ 1
SPTAN1-217ENST00000629089 F8W031 263 aaPredicted RBP21.32■■□□□ 1
SPTAN1-217ENST00000629089 RNF113AO15541 343 aaKnown RBP21.32■■□□□ 1
SPTAN1-217ENST00000629089 CHMLP26374 656 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms