RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 TTC41PQ6P2S7 1318 aa14.86□□□□□ -0.03
SYNGAP1-207ENST00000628646 AOC3Q16853 763 aa14.86□□□□□ -0.03
SYNGAP1-207ENST00000628646 DPY19L2Q6NUT2 758 aa14.86□□□□□ -0.03
SYNGAP1-207ENST00000628646 DBNLQ9UJU6 430 aaKnown RBP14.86□□□□□ -0.03
SYNGAP1-207ENST00000628646 UTYO14607 1347 aa14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 ZAP70P43403 619 aa14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 WDR66Q8TBY9 1149 aa14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 ZNF526Q8TF50 670 aaPredicted RBP14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 IL17RAQ96F46 866 aa14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 STAP2Q9UGK3 403 aa14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 MYO1BO43795 1136 aa14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 BAG3O95817 575 aa14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 KIAA0825Q8IV33 1275 aa14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 SPATA5Q8NB90 893 aa14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 VEZTQ9HBM0 779 aa14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 CYP2E1P05181 493 aaPredicted RBP14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 SLC4A8Q2Y0W8 1093 aa14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 RRP12Q5JTH9 1297 aaKnown RBP14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 EDC3Q96F86 508 aaKnown RBP14.85□□□□□ -0.03
SYNGAP1-207ENST00000628646 RNF20Q5VTR2 975 aa14.84□□□□□ -0.03
SYNGAP1-207ENST00000628646 MAGEB6Q8N7X4 407 aa14.84□□□□□ -0.03
SYNGAP1-207ENST00000628646 MIGA1Q8NAN2 632 aa14.84□□□□□ -0.03
SYNGAP1-207ENST00000628646 RNF181Q9P0P0 153 aa14.84□□□□□ -0.03
SYNGAP1-207ENST00000628646 CASP7P55210 303 aa14.84□□□□□ -0.03
SYNGAP1-207ENST00000628646 GSTO1P78417 241 aa14.84□□□□□ -0.03
SYNGAP1-207ENST00000628646 RIPOR2Q9Y4F9 1068 aa14.83□□□□□ -0.03
SYNGAP1-207ENST00000628646 TRAK2O60296 914 aa14.83□□□□□ -0.04
SYNGAP1-207ENST00000628646 MINDY4BA8MYZ0 360 aa14.83□□□□□ -0.04
SYNGAP1-207ENST00000628646 RABEP1Q15276 862 aa14.83□□□□□ -0.04
SYNGAP1-207ENST00000628646 POLR3DP05423 398 aaPredicted RBP14.83□□□□□ -0.04
SYNGAP1-207ENST00000628646 NCLP19338 710 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-207ENST00000628646 RALYLQ86SE5 291 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-207ENST00000628646 BRWD3Q6RI45 1802 aa14.83□□□□□ -0.04
SYNGAP1-207ENST00000628646 TBC1D16Q8TBP0 767 aa14.82□□□□□ -0.04
SYNGAP1-207ENST00000628646 TTF2Q9UNY4 1162 aaKnown RBP14.82□□□□□ -0.04
SYNGAP1-207ENST00000628646 PI16Q6UXB8 463 aa14.82□□□□□ -0.04
SYNGAP1-207ENST00000628646 IL25Q9H293 177 aa14.82□□□□□ -0.04
SYNGAP1-207ENST00000628646 SCNN1DP51172 638 aa14.82□□□□□ -0.04
SYNGAP1-207ENST00000628646 PICALMQ13492 652 aa14.82□□□□□ -0.04
SYNGAP1-207ENST00000628646 ATG9AQ7Z3C6 839 aa14.82□□□□□ -0.04
SYNGAP1-207ENST00000628646 TBC1D22AQ8WUA7 517 aa14.82□□□□□ -0.04
SYNGAP1-207ENST00000628646 GPR108Q9NPR9 543 aa14.81□□□□□ -0.04
SYNGAP1-207ENST00000628646 MTMR7Q9Y216 660 aa14.81□□□□□ -0.04
SYNGAP1-207ENST00000628646 TTLL12Q14166 644 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-207ENST00000628646 SAMD1Q6SPF0 538 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-207ENST00000628646 NAPBQ9H115 298 aa14.81□□□□□ -0.04
SYNGAP1-207ENST00000628646 SLC3A2P08195 630 aaKnown RBP14.81□□□□□ -0.04
SYNGAP1-207ENST00000628646 CRACR2BQ8N4Y2 399 aaPredicted RBP14.81□□□□□ -0.04
SYNGAP1-207ENST00000628646 SYT17Q9BSW7 474 aa14.81□□□□□ -0.04
SYNGAP1-207ENST00000628646 GRIN3BO60391 1043 aa14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 NLGN2Q8NFZ4 835 aa14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 H7C1D1 291 aa14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 RFX5P48382 616 aaPredicted RBP14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 EAPPQ56P03 285 aaPredicted RBP14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 ZFYP08048 801 aaPredicted RBP14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 XRCC6P12956 609 aaKnown RBP eCLIP14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 ATP5JP18859 108 aa14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 ATP2B2Q01814 1243 aa14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 TNIP1Q15025 636 aa14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 COA1Q9GZY4 146 aa14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 TOGARAM1Q9Y4F4 1720 aa14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 NHSQ6T4R5 1651 aa14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 L1TD1Q5T7N2 865 aaKnown RBP14.8□□□□□ -0.04
SYNGAP1-207ENST00000628646 GRIPAP1Q4V328 841 aa14.79□□□□□ -0.04
SYNGAP1-207ENST00000628646 CIAPIN1Q6FI81 312 aa14.79□□□□□ -0.04
SYNGAP1-207ENST00000628646 CD209Q9NNX6 404 aa14.79□□□□□ -0.04
SYNGAP1-207ENST00000628646 DDX11L8A8MPP1 907 aa14.79□□□□□ -0.04
SYNGAP1-207ENST00000628646 ECE2O60344 883 aa14.79□□□□□ -0.04
SYNGAP1-207ENST00000628646 PI4K2BQ8TCG2 481 aa14.79□□□□□ -0.04
SYNGAP1-207ENST00000628646 CRNKL1Q9BZJ0 848 aaKnown RBP14.79□□□□□ -0.04
SYNGAP1-207ENST00000628646 FOXD4L1Q9NU39 408 aa14.79□□□□□ -0.04
SYNGAP1-207ENST00000628646 C4BP0C0L5 1744 aa14.79□□□□□ -0.04
SYNGAP1-207ENST00000628646 ESYT1Q9BSJ8 1104 aa14.78□□□□□ -0.04
SYNGAP1-207ENST00000628646 AOX1Q06278 1338 aa14.78□□□□□ -0.04
SYNGAP1-207ENST00000628646 MAGEB6P1A0A0J9YX57 407 aa14.78□□□□□ -0.04
SYNGAP1-207ENST00000628646 CHMLP26374 656 aa14.78□□□□□ -0.04
SYNGAP1-207ENST00000628646 PKP1Q13835 747 aa14.78□□□□□ -0.04
SYNGAP1-207ENST00000628646 DLGAP5Q15398 846 aa14.78□□□□□ -0.04
SYNGAP1-207ENST00000628646 RNF113AO15541 343 aaKnown RBP14.78□□□□□ -0.04
SYNGAP1-207ENST00000628646 HOXA10P31260 410 aaPredicted RBP14.78□□□□□ -0.04
SYNGAP1-207ENST00000628646 IARSP41252 1262 aaKnown RBP14.78□□□□□ -0.04
SYNGAP1-207ENST00000628646 ZDHHC9Q9Y397 364 aa14.78□□□□□ -0.04
SYNGAP1-207ENST00000628646 RASGRF1Q13972 1273 aa14.78□□□□□ -0.04
SYNGAP1-207ENST00000628646 USP17L3A6NCW0 530 aa14.77□□□□□ -0.04
SYNGAP1-207ENST00000628646 USP17L4A6NCW7 530 aa14.77□□□□□ -0.04
SYNGAP1-207ENST00000628646 USP17L1Q7RTZ2 530 aa14.77□□□□□ -0.04
SYNGAP1-207ENST00000628646 FAM84BQ96KN1 310 aaPredicted RBP14.77□□□□□ -0.04
SYNGAP1-207ENST00000628646 PALD1Q9ULE6 856 aa14.77□□□□□ -0.04
SYNGAP1-207ENST00000628646 SLC4A4Q9Y6R1 1079 aa14.77□□□□□ -0.04
SYNGAP1-207ENST00000628646 PODNQ7Z5L7 613 aa14.77□□□□□ -0.05
SYNGAP1-207ENST00000628646 AATFQ9NY61 560 aaKnown RBP eCLIP14.77□□□□□ -0.05
SYNGAP1-207ENST00000628646 CTNNA3Q9UI47 895 aa14.77□□□□□ -0.05
SYNGAP1-207ENST00000628646 MAST3O60307 1309 aa14.77□□□□□ -0.05
SYNGAP1-207ENST00000628646 ERICH2A1L162 156 aa14.77□□□□□ -0.05
SYNGAP1-207ENST00000628646 RASSF7Q02833 373 aa14.77□□□□□ -0.05
SYNGAP1-207ENST00000628646 NMIQ13287 307 aaPredicted RBP14.77□□□□□ -0.05
SYNGAP1-207ENST00000628646 KBTBD3Q8NAB2 608 aa14.77□□□□□ -0.05
SYNGAP1-207ENST00000628646 HMG20BQ9P0W2 317 aa14.77□□□□□ -0.05
SYNGAP1-207ENST00000628646 MCM2P49736 904 aa14.76□□□□□ -0.05
SYNGAP1-207ENST00000628646 MBD4O95243 580 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms