RNA–Protein interactions for RNA: ENST00000627515.2

ACAA1-220, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 5 BASIC

Gene ACAA1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-220ENST00000627515 TNRC6CQ9HCJ0 1690 aaKnown RBP29.72■■■□□ 2.35
ACAA1-220ENST00000627515 ZNF532Q9HCE3 1301 aa29.72■■■□□ 2.35
ACAA1-220ENST00000627515 CARMIL3Q8ND23 1372 aa29.72■■■□□ 2.35
ACAA1-220ENST00000627515 GJB2P29033 226 aa29.72■■■□□ 2.35
ACAA1-220ENST00000627515 TTLL5Q6EMB2 1281 aa29.72■■■□□ 2.35
ACAA1-220ENST00000627515 Q6ZUG5 572 aa29.72■■■□□ 2.35
ACAA1-220ENST00000627515 WWC3Q9ULE0 1092 aa29.72■■■□□ 2.35
ACAA1-220ENST00000627515 DHX32Q7L7V1 743 aaKnown RBP29.71■■■□□ 2.35
ACAA1-220ENST00000627515 MINPP1Q9UNW1 487 aa29.71■■■□□ 2.35
ACAA1-220ENST00000627515 TCRBV5S4A2TA0A5A2 114 aa29.7■■■□□ 2.35
ACAA1-220ENST00000627515 UBE4AQ14139 1066 aa29.7■■■□□ 2.35
ACAA1-220ENST00000627515 IMMTQ16891 758 aaKnown RBP29.7■■■□□ 2.35
ACAA1-220ENST00000627515 SLC27A3Q5K4L6 730 aa29.7■■■□□ 2.35
ACAA1-220ENST00000627515 FGAP02671 866 aa29.7■■■□□ 2.34
ACAA1-220ENST00000627515 SYT1P21579 422 aa29.7■■■□□ 2.34
ACAA1-220ENST00000627515 MAP3K12Q12852 859 aa29.7■■■□□ 2.34
ACAA1-220ENST00000627515 LMBRD1Q9NUN5 540 aa29.7■■■□□ 2.34
ACAA1-220ENST00000627515 NPHP1O15259 732 aa29.69■■■□□ 2.34
ACAA1-220ENST00000627515 STX6O43752 255 aa29.69■■■□□ 2.34
ACAA1-220ENST00000627515 RPS8P62241 208 aaKnown RBP29.68■■■□□ 2.34
ACAA1-220ENST00000627515 CCDC24Q8N4L8 307 aa29.68■■■□□ 2.34
ACAA1-220ENST00000627515 ZNF804BA4D1E1 1349 aa29.68■■■□□ 2.34
ACAA1-220ENST00000627515 TCHHQ07283 1943 aa29.68■■■□□ 2.34
ACAA1-220ENST00000627515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.68■■■□□ 2.34
ACAA1-220ENST00000627515 TRIM37O94972 964 aa29.68■■■□□ 2.34
ACAA1-220ENST00000627515 FGD1P98174 961 aa29.68■■■□□ 2.34
ACAA1-220ENST00000627515 ZSCAN22P10073 491 aaPredicted RBP29.67■■■□□ 2.34
ACAA1-220ENST00000627515 NFIXQ14938 502 aa29.67■■■□□ 2.34
ACAA1-220ENST00000627515 KLHL40Q2TBA0 621 aa29.67■■■□□ 2.34
ACAA1-220ENST00000627515 DDX49Q9Y6V7 483 aaKnown RBP29.67■■■□□ 2.34
ACAA1-220ENST00000627515 MYH13Q9UKX3 1938 aa29.67■■■□□ 2.34
ACAA1-220ENST00000627515 EXOSC10Q01780 885 aaKnown RBP29.66■■■□□ 2.34
ACAA1-220ENST00000627515 CHAMP1Q96JM3 812 aa29.66■■■□□ 2.34
ACAA1-220ENST00000627515 LRRC2Q9BYS8 371 aa29.66■■■□□ 2.34
ACAA1-220ENST00000627515 MAGEB6Q8N7X4 407 aa29.65■■■□□ 2.34
ACAA1-220ENST00000627515 BRF1Q92994 677 aa29.65■■■□□ 2.34
ACAA1-220ENST00000627515 GNL3LQ9NVN8 582 aaKnown RBP29.65■■■□□ 2.34
ACAA1-220ENST00000627515 HAND2P61296 217 aa29.65■■■□□ 2.34
ACAA1-220ENST00000627515 STK3Q13188 491 aa29.65■■■□□ 2.34
ACAA1-220ENST00000627515 GTF3C6Q969F1 213 aa29.65■■■□□ 2.34
ACAA1-220ENST00000627515 PRPF40AO75400 957 aaKnown RBP29.64■■■□□ 2.34
ACAA1-220ENST00000627515 AIDAQ96BJ3 306 aa29.64■■■□□ 2.34
ACAA1-220ENST00000627515 GYG1P46976 350 aa29.63■■■□□ 2.33
ACAA1-220ENST00000627515 CNBD1Q8NA66 436 aa29.63■■■□□ 2.33
ACAA1-220ENST00000627515 AGXT2Q9BYV1 514 aa29.63■■■□□ 2.33
ACAA1-220ENST00000627515 CAVIN4Q5BKX8 364 aa29.63■■■□□ 2.33
ACAA1-220ENST00000627515 ZNF213O14771 459 aa29.62■■■□□ 2.33
ACAA1-220ENST00000627515 CHD4Q14839 1912 aa29.62■■■□□ 2.33
ACAA1-220ENST00000627515 WTIPA6NIX2 430 aaPredicted RBP29.61■■■□□ 2.33
ACAA1-220ENST00000627515 DTNBO60941 627 aa29.61■■■□□ 2.33
ACAA1-220ENST00000627515 TM4SF1P30408 202 aa29.61■■■□□ 2.33
ACAA1-220ENST00000627515 STRBPQ96SI9 672 aaKnown RBP29.61■■■□□ 2.33
ACAA1-220ENST00000627515 ANKRD2Q9GZV1 360 aa29.61■■■□□ 2.33
ACAA1-220ENST00000627515 IQSEC3Q9UPP2 1182 aaPredicted RBP29.61■■■□□ 2.33
ACAA1-220ENST00000627515 PDIA4P13667 645 aaKnown RBP29.61■■■□□ 2.33
ACAA1-220ENST00000627515 COL1A1P02452 1464 aaPredicted RBP29.6■■■□□ 2.33
ACAA1-220ENST00000627515 F13A1P00488 732 aa29.6■■■□□ 2.33
ACAA1-220ENST00000627515 APPP05067 770 aa29.6■■■□□ 2.33
ACAA1-220ENST00000627515 VPS37DQ86XT2 251 aa29.6■■■□□ 2.33
ACAA1-220ENST00000627515 LRP2BPQ9P2M1 347 aa29.6■■■□□ 2.33
ACAA1-220ENST00000627515 MTMR6Q9Y217 621 aa29.6■■■□□ 2.33
ACAA1-220ENST00000627515 PDCP20941 246 aa29.59■■■□□ 2.33
ACAA1-220ENST00000627515 MBD4O95243 580 aa29.59■■■□□ 2.33
ACAA1-220ENST00000627515 GYS1P13807 737 aa29.59■■■□□ 2.33
ACAA1-220ENST00000627515 RBM6P78332 1123 aaKnown RBP29.59■■■□□ 2.33
ACAA1-220ENST00000627515 ZMYM6O95789 1325 aa29.58■■■□□ 2.33
ACAA1-220ENST00000627515 FOXD4L6Q3SYB3 417 aaPredicted RBP29.58■■■□□ 2.33
ACAA1-220ENST00000627515 ZNF772Q68DY9 489 aaPredicted RBP29.58■■■□□ 2.33
ACAA1-220ENST00000627515 FOXD4L3Q6VB84 417 aaPredicted RBP29.58■■■□□ 2.33
ACAA1-220ENST00000627515 FBXL16Q8N461 479 aa29.58■■■□□ 2.33
ACAA1-220ENST00000627515 FAM84BQ96KN1 310 aaPredicted RBP29.58■■■□□ 2.33
ACAA1-220ENST00000627515 ATP6V1DQ9Y5K8 247 aa29.58■■■□□ 2.33
ACAA1-220ENST00000627515 PFKFB2O60825 505 aa29.57■■■□□ 2.32
ACAA1-220ENST00000627515 APOBRQ0VD83 1088 aa29.57■■■□□ 2.32
ACAA1-220ENST00000627515 LARP1BQ659C4 914 aaKnown RBP29.57■■■□□ 2.32
ACAA1-220ENST00000627515 CHST3Q7LGC8 479 aa29.57■■■□□ 2.32
ACAA1-220ENST00000627515 NCOA7Q8NI08 942 aa29.57■■■□□ 2.32
ACAA1-220ENST00000627515 ALX1Q15699 326 aa29.57■■■□□ 2.32
ACAA1-220ENST00000627515 RALYLQ86SE5 291 aaKnown RBP29.57■■■□□ 2.32
ACAA1-220ENST00000627515 MB21D2Q8IYB1 491 aaPredicted RBP29.57■■■□□ 2.32
ACAA1-220ENST00000627515 DENND2AQ9ULE3 1009 aa29.57■■■□□ 2.32
ACAA1-220ENST00000627515 VPS37CA5D8V6 355 aaPredicted RBP29.56■■■□□ 2.32
ACAA1-220ENST00000627515 MCM5P33992 734 aa29.56■■■□□ 2.32
ACAA1-220ENST00000627515 PRR5LQ6MZQ0 368 aa29.56■■■□□ 2.32
ACAA1-220ENST00000627515 GOLGA6L3A6NEY3 463 aa29.55■■■□□ 2.32
ACAA1-220ENST00000627515 PATL2C9JE40 543 aaKnown RBP29.55■■■□□ 2.32
ACAA1-220ENST00000627515 HMGB2P26583 209 aaKnown RBP29.55■■■□□ 2.32
ACAA1-220ENST00000627515 SCRN1Q12765 414 aa29.55■■■□□ 2.32
ACAA1-220ENST00000627515 FBXO33Q7Z6M2 555 aa29.55■■■□□ 2.32
ACAA1-220ENST00000627515 NBPF3Q9H094 633 aa29.55■■■□□ 2.32
ACAA1-220ENST00000627515 ARMT1Q9H993 441 aa29.55■■■□□ 2.32
ACAA1-220ENST00000627515 CACNA1SQ13698 1873 aa29.55■■■□□ 2.32
ACAA1-220ENST00000627515 FSD2A1L4K1 749 aa29.55■■■□□ 2.32
ACAA1-220ENST00000627515 SEMA3EO15041 775 aa29.55■■■□□ 2.32
ACAA1-220ENST00000627515 TXNRD1Q16881 649 aa29.55■■■□□ 2.32
ACAA1-220ENST00000627515 ABCF2Q9UG63 623 aa29.55■■■□□ 2.32
ACAA1-220ENST00000627515 PNPLA7Q6ZV29 1317 aa29.54■■■□□ 2.32
ACAA1-220ENST00000627515 NCLP19338 710 aaKnown RBP29.54■■■□□ 2.32
ACAA1-220ENST00000627515 KLRK1P26718 216 aa29.54■■■□□ 2.32
ACAA1-220ENST00000627515 GRAPQ13588 217 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms