RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 MAP3K11Q16584 847 aa11.15□□□□□ -0.62
TCF4-258ENST00000627320 ANKRD13DQ6ZTN6 518 aa11.15□□□□□ -0.62
TCF4-258ENST00000627320 APOBEC3FQ8IUX4 373 aaKnown RBP11.15□□□□□ -0.62
TCF4-258ENST00000627320 OPTNQ96CV9 577 aa11.15□□□□□ -0.62
TCF4-258ENST00000627320 MS4A4AQ96JQ5 239 aa11.15□□□□□ -0.62
TCF4-258ENST00000627320 MYD88Q99836 296 aa11.15□□□□□ -0.62
TCF4-258ENST00000627320 COL1A1P02452 1464 aaPredicted RBP11.14□□□□□ -0.63
TCF4-258ENST00000627320 GTF2IP78347 998 aa11.14□□□□□ -0.63
TCF4-258ENST00000627320 PODNQ7Z5L7 613 aa11.14□□□□□ -0.63
TCF4-258ENST00000627320 VEZTQ9HBM0 779 aa11.14□□□□□ -0.63
TCF4-258ENST00000627320 STAP2Q9UGK3 403 aa11.14□□□□□ -0.63
TCF4-258ENST00000627320 LAS1LQ9Y4W2 734 aaKnown RBP11.14□□□□□ -0.63
TCF4-258ENST00000627320 DDX60LQ5H9U9 1706 aaKnown RBP11.13□□□□□ -0.63
TCF4-258ENST00000627320 TESPA1A2RU30 521 aaPredicted RBP11.13□□□□□ -0.63
TCF4-258ENST00000627320 ZBTB7BO15156 539 aaPredicted RBP11.13□□□□□ -0.63
TCF4-258ENST00000627320 ATP2B4P23634 1241 aa11.13□□□□□ -0.63
TCF4-258ENST00000627320 CCT4P50991 539 aaKnown RBP11.13□□□□□ -0.63
TCF4-258ENST00000627320 HDGFL1Q5TGJ6 251 aa11.13□□□□□ -0.63
TCF4-258ENST00000627320 UBE2Q1Q7Z7E8 422 aa11.13□□□□□ -0.63
TCF4-258ENST00000627320 ANKRD18AQ8IVF6 992 aa11.13□□□□□ -0.63
TCF4-258ENST00000627320 PRMT6Q96LA8 375 aaPredicted RBP11.13□□□□□ -0.63
TCF4-258ENST00000627320 MINPP1Q9UNW1 487 aa11.13□□□□□ -0.63
TCF4-258ENST00000627320 AK9Q5TCS8 1911 aa11.13□□□□□ -0.63
TCF4-258ENST00000627320 CCL15-CCL14A0A0B4J2E2 113 aa11.12□□□□□ -0.63
TCF4-258ENST00000627320 RIPK4P57078 832 aa11.12□□□□□ -0.63
TCF4-258ENST00000627320 CACNB1Q02641 598 aaPredicted RBP11.12□□□□□ -0.63
TCF4-258ENST00000627320 CCL15Q16663 113 aa11.12□□□□□ -0.63
TCF4-258ENST00000627320 STRIP1Q5VSL9 837 aa11.12□□□□□ -0.63
TCF4-258ENST00000627320 TTLL5Q6EMB2 1281 aa11.12□□□□□ -0.63
TCF4-258ENST00000627320 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.12□□□□□ -0.63
TCF4-258ENST00000627320 OGFOD1Q8N543 542 aa11.12□□□□□ -0.63
TCF4-258ENST00000627320 ZBTB38Q8NAP3 1195 aaPredicted RBP11.12□□□□□ -0.63
TCF4-258ENST00000627320 GREM2Q9H772 168 aa11.12□□□□□ -0.63
TCF4-258ENST00000627320 MNX1P50219 401 aaPredicted RBP11.11□□□□□ -0.63
TCF4-258ENST00000627320 INHBEP58166 350 aa11.11□□□□□ -0.63
TCF4-258ENST00000627320 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
TCF4-258ENST00000627320 CFAP100Q494V2 611 aa11.11□□□□□ -0.63
TCF4-258ENST00000627320 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
TCF4-258ENST00000627320 ZNF804BA4D1E1 1349 aa11.1□□□□□ -0.63
TCF4-258ENST00000627320 MAPK8IP3Q9UPT6 1336 aa11.1□□□□□ -0.63
TCF4-258ENST00000627320 IRS2Q9Y4H2 1338 aa11.1□□□□□ -0.63
TCF4-258ENST00000627320 PTPRFP10586 1907 aa11.1□□□□□ -0.63
TCF4-258ENST00000627320 PDE8AO60658 829 aa11.1□□□□□ -0.63
TCF4-258ENST00000627320 LACTBP83111 547 aaPredicted RBP11.1□□□□□ -0.63
TCF4-258ENST00000627320 TRIM26Q12899 539 aaPredicted RBP11.1□□□□□ -0.63
TCF4-258ENST00000627320 VGLL4Q14135 290 aa11.1□□□□□ -0.63
TCF4-258ENST00000627320 DLGAP5Q15398 846 aa11.1□□□□□ -0.63
TCF4-258ENST00000627320 CCDC152Q4G0S7 254 aa11.1□□□□□ -0.63
TCF4-258ENST00000627320 RAPGEFL1Q9UHV5 662 aa11.1□□□□□ -0.63
TCF4-258ENST00000627320 CPA4Q9UI42 421 aa11.1□□□□□ -0.63
TCF4-258ENST00000627320 PPP1R12BO60237 982 aaPredicted RBP11.09□□□□□ -0.63
TCF4-258ENST00000627320 PCCAP05165 728 aaPredicted RBP11.09□□□□□ -0.63
TCF4-258ENST00000627320 CCL5P13501 91 aa11.09□□□□□ -0.63
TCF4-258ENST00000627320 CTSWP56202 376 aa11.09□□□□□ -0.63
TCF4-258ENST00000627320 RASA3Q14644 834 aa11.09□□□□□ -0.63
TCF4-258ENST00000627320 RIC3Q7Z5B4 369 aa11.09□□□□□ -0.63
TCF4-258ENST00000627320 NBPF11Q86T75 865 aa11.09□□□□□ -0.63
TCF4-258ENST00000627320 DEFB123Q8N688 67 aa11.09□□□□□ -0.63
TCF4-258ENST00000627320 DIS3LQ8TF46 1054 aaKnown RBP11.09□□□□□ -0.63
TCF4-258ENST00000627320 TRIM47Q96LD4 638 aa11.09□□□□□ -0.63
TCF4-258ENST00000627320 TEPSINQ96N21 525 aa11.09□□□□□ -0.63
TCF4-258ENST00000627320 UNC93B1Q9H1C4 597 aa11.09□□□□□ -0.63
TCF4-258ENST00000627320 ZMYND8Q9ULU4 1186 aaPredicted RBP11.09□□□□□ -0.63
TCF4-258ENST00000627320 MYO3BQ8WXR4 1341 aa11.09□□□□□ -0.63
TCF4-258ENST00000627320 LAMA2P24043 3122 aaKnown RBP11.08□□□□□ -0.64
TCF4-258ENST00000627320 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
TCF4-258ENST00000627320 BTBD19C9JJ37 291 aa11.08□□□□□ -0.64
TCF4-258ENST00000627320 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
TCF4-258ENST00000627320 OSBPP22059 807 aa11.08□□□□□ -0.64
TCF4-258ENST00000627320 TMPOP42166 694 aaKnown RBP11.08□□□□□ -0.64
TCF4-258ENST00000627320 CACNB3P54284 484 aa11.08□□□□□ -0.64
TCF4-258ENST00000627320 ANKRD13AQ8IZ07 590 aa11.08□□□□□ -0.64
TCF4-258ENST00000627320 HELBQ8NG08 1087 aaPredicted RBP11.08□□□□□ -0.64
TCF4-258ENST00000627320 TTLL11Q8NHH1 800 aa11.08□□□□□ -0.64
TCF4-258ENST00000627320 TMEM39BQ9GZU3 492 aa11.08□□□□□ -0.64
TCF4-258ENST00000627320 COA1Q9GZY4 146 aa11.08□□□□□ -0.64
TCF4-258ENST00000627320 ZFYVE28Q9HCC9 887 aa11.08□□□□□ -0.64
TCF4-258ENST00000627320 GABRQQ9UN88 632 aa11.08□□□□□ -0.64
TCF4-258ENST00000627320 PRUNE2Q8WUY3 3088 aa11.08□□□□□ -0.64
TCF4-258ENST00000627320 ELL2O00472 640 aaPredicted RBP11.07□□□□□ -0.64
TCF4-258ENST00000627320 CHL1O00533 1208 aa11.07□□□□□ -0.64
TCF4-258ENST00000627320 TAF5LO75529 589 aa11.07□□□□□ -0.64
TCF4-258ENST00000627320 FARP2O94887 1054 aaPredicted RBP11.07□□□□□ -0.64
TCF4-258ENST00000627320 IGKV5-2P06315 115 aa11.07□□□□□ -0.64
TCF4-258ENST00000627320 NEFMP07197 916 aa11.07□□□□□ -0.64
TCF4-258ENST00000627320 SYN1P17600 705 aa11.07□□□□□ -0.64
TCF4-258ENST00000627320 GJA8P48165 433 aa11.07□□□□□ -0.64
TCF4-258ENST00000627320 IREB2P48200 963 aaKnown RBP11.07□□□□□ -0.64
TCF4-258ENST00000627320 TRIM28Q13263 835 aaKnown RBP11.07□□□□□ -0.64
TCF4-258ENST00000627320 GRIK5Q16478 980 aa11.07□□□□□ -0.64
TCF4-258ENST00000627320 OTUD7BQ6GQQ9 843 aa11.07□□□□□ -0.64
TCF4-258ENST00000627320 TDRD3Q9H7E2 651 aaKnown RBP11.07□□□□□ -0.64
TCF4-258ENST00000627320 CD209Q9NNX6 404 aa11.07□□□□□ -0.64
TCF4-258ENST00000627320 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
TCF4-258ENST00000627320 TRIM35Q9UPQ4 493 aa11.07□□□□□ -0.64
TCF4-258ENST00000627320 SNCAIPQ9Y6H5 919 aa11.07□□□□□ -0.64
TCF4-258ENST00000627320 PLXNB2O15031 1838 aa11.07□□□□□ -0.64
TCF4-258ENST00000627320 MYH13Q9UKX3 1938 aa11.06□□□□□ -0.64
TCF4-258ENST00000627320 TCP10L2B9ZVM9 353 aa11.06□□□□□ -0.64
TCF4-258ENST00000627320 TLR2O60603 784 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms