RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 C9orf131Q5VYM1 1079 aa8.25□□□□□ -1.09
TCF4-249ENST00000625716 STYK1Q6J9G0 422 aa8.25□□□□□ -1.09
TCF4-249ENST00000625716 COPS6Q7L5N1 327 aa8.25□□□□□ -1.09
TCF4-249ENST00000625716 XAGE3Q8WTP9 111 aa8.25□□□□□ -1.09
TCF4-249ENST00000625716 HYPKQ9NX55 129 aa8.25□□□□□ -1.09
TCF4-249ENST00000625716 CHPF2Q9P2E5 772 aa8.25□□□□□ -1.09
TCF4-249ENST00000625716 NRXN2Q9P2S2 1712 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 ATP10DQ9P241 1426 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 C21orf2O43822 256 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 SRGNP10124 158 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 NPR1P16066 1061 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 ALDH1B1P30837 517 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 PROSER3Q2NL68 480 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 SOGA3Q5TF21 947 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 WWC1Q8IX03 1113 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 ZNF34Q8IZ26 560 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 PRR7Q8TB68 274 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 TBC1D2Q9BYX2 928 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 EVA1BQ9NVM1 165 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 RNF181Q9P0P0 153 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 PCDHB15Q9Y5E8 787 aa8.24□□□□□ -1.09
TCF4-249ENST00000625716 KIAA1551Q9HCM1 1747 aa8.23□□□□□ -1.09
TCF4-249ENST00000625716 BCORQ6W2J9 1755 aa8.23□□□□□ -1.09
TCF4-249ENST00000625716 CCNYL3P0C7X3 344 aa8.23□□□□□ -1.09
TCF4-249ENST00000625716 SH3BP2P78314 561 aa8.23□□□□□ -1.09
TCF4-249ENST00000625716 ERFEQ4G0M1 354 aa8.23□□□□□ -1.09
TCF4-249ENST00000625716 CCDC30Q5VVM6 783 aa8.23□□□□□ -1.09
TCF4-249ENST00000625716 SUSD4Q5VX71 490 aa8.23□□□□□ -1.09
TCF4-249ENST00000625716 RSBN1LQ6PCB5 846 aaPredicted RBP8.23□□□□□ -1.09
TCF4-249ENST00000625716 PLBD2Q8NHP8 589 aa8.23□□□□□ -1.09
TCF4-249ENST00000625716 RPGRQ92834 1020 aaKnown RBP8.23□□□□□ -1.09
TCF4-249ENST00000625716 UTP14AQ9BVJ6 771 aaKnown RBP8.23□□□□□ -1.09
TCF4-249ENST00000625716 TMX4Q9H1E5 349 aaPredicted RBP8.23□□□□□ -1.09
TCF4-249ENST00000625716 AFDNP55196 1824 aaKnown RBP8.23□□□□□ -1.09
TCF4-249ENST00000625716 DDX58O95786 925 aaKnown RBP8.22□□□□□ -1.09
TCF4-249ENST00000625716 LMNB1P20700 586 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 TCIRG1Q13488 830 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 PTPRNQ16849 979 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 PRPF40BQ6NWY9 871 aaKnown RBP8.22□□□□□ -1.09
TCF4-249ENST00000625716 TREML4Q6UXN2 200 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 LRP10Q7Z4F1 713 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 RIC3Q7Z5B4 369 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 C8orf58Q8NAV2 365 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 RBM17Q96I25 401 aaKnown RBP8.22□□□□□ -1.09
TCF4-249ENST00000625716 NLRP3Q96P20 1036 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 STK31Q9BXU1 1019 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 ATP13A2Q9NQ11 1180 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 TRMT112Q9UI30 125 aaKnown RBP8.22□□□□□ -1.09
TCF4-249ENST00000625716 IL16Q14005 1332 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 UBN2Q6ZU65 1347 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 KDM2BQ8NHM5 1336 aa8.22□□□□□ -1.09
TCF4-249ENST00000625716 IBTKQ9P2D0 1353 aaPredicted RBP8.22□□□□□ -1.09
TCF4-249ENST00000625716 KLRG2A4D1S0 409 aaPredicted RBP8.21□□□□□ -1.1
TCF4-249ENST00000625716 NTSR2O95665 410 aa8.21□□□□□ -1.1
TCF4-249ENST00000625716 SNRPBP14678 240 aaKnown RBP8.21□□□□□ -1.1
TCF4-249ENST00000625716 GJA5P36382 358 aa8.21□□□□□ -1.1
TCF4-249ENST00000625716 C1QTNF8P60827 252 aa8.21□□□□□ -1.1
TCF4-249ENST00000625716 RASSF7Q02833 373 aa8.21□□□□□ -1.1
TCF4-249ENST00000625716 MTMR2Q13614 643 aa8.21□□□□□ -1.1
TCF4-249ENST00000625716 WDR63Q8IWG1 891 aa8.21□□□□□ -1.1
TCF4-249ENST00000625716 C16orf71Q8IYS4 520 aaPredicted RBP8.21□□□□□ -1.1
TCF4-249ENST00000625716 TSR2Q969E8 191 aaKnown RBP8.21□□□□□ -1.1
TCF4-249ENST00000625716 TAOK3Q9H2K8 898 aa8.21□□□□□ -1.1
TCF4-249ENST00000625716 RNF123Q5XPI4 1314 aa8.21□□□□□ -1.1
TCF4-249ENST00000625716 ADCY9O60503 1353 aa8.21□□□□□ -1.1
TCF4-249ENST00000625716 SPTLC1O15269 473 aa8.2□□□□□ -1.1
TCF4-249ENST00000625716 ALDH1A1P00352 501 aa8.2□□□□□ -1.1
TCF4-249ENST00000625716 KCNH2Q12809 1159 aa8.2□□□□□ -1.1
TCF4-249ENST00000625716 TWISTNBQ3B726 338 aaPredicted RBP8.2□□□□□ -1.1
TCF4-249ENST00000625716 CCDC93Q567U6 631 aa8.2□□□□□ -1.1
TCF4-249ENST00000625716 DESI1Q6ICB0 168 aa8.2□□□□□ -1.1
TCF4-249ENST00000625716 NLRP10Q86W26 655 aa8.2□□□□□ -1.1
TCF4-249ENST00000625716 RTKN2Q8IZC4 609 aa8.2□□□□□ -1.1
TCF4-249ENST00000625716 BAP1Q92560 729 aa8.2□□□□□ -1.1
TCF4-249ENST00000625716 UNC93B1Q9H1C4 597 aa8.2□□□□□ -1.1
TCF4-249ENST00000625716 MYH16Q9H6N6 1097 aa8.2□□□□□ -1.1
TCF4-249ENST00000625716 ARFGEF1Q9Y6D6 1849 aa8.19□□□□□ -1.1
TCF4-249ENST00000625716 BRCA1P38398 1863 aaKnown RBP8.19□□□□□ -1.1
TCF4-249ENST00000625716 CFAP99D6REC4 459 aa8.19□□□□□ -1.1
TCF4-249ENST00000625716 ATP5J2-PTCD1G3V325 749 aa8.19□□□□□ -1.1
TCF4-249ENST00000625716 NFKBIEO00221 500 aa8.19□□□□□ -1.1
TCF4-249ENST00000625716 HSP90B1P14625 803 aaKnown RBP8.19□□□□□ -1.1
TCF4-249ENST00000625716 CRY2Q49AN0 593 aa8.19□□□□□ -1.1
TCF4-249ENST00000625716 SLC10A5Q5PT55 438 aa8.19□□□□□ -1.1
TCF4-249ENST00000625716 CC2D2BQ6DHV5 1058 aa8.19□□□□□ -1.1
TCF4-249ENST00000625716 CRAMP1Q96RY5 1269 aa8.19□□□□□ -1.1
TCF4-249ENST00000625716 PHAXQ9H814 394 aaKnown RBP8.19□□□□□ -1.1
TCF4-249ENST00000625716 SH3TC1Q8TE82 1336 aa8.19□□□□□ -1.1
TCF4-249ENST00000625716 ZC3H4Q9UPT8 1303 aaKnown RBP8.19□□□□□ -1.1
TCF4-249ENST00000625716 ABCC12Q96J65 1359 aa8.19□□□□□ -1.1
TCF4-249ENST00000625716 DLEC1Q9Y238 1755 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 NUP98P52948 1817 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 ANKRD31Q8N7Z5 1873 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 SPDYE5A6NIY4 337 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 TCERG1O14776 1098 aaKnown RBP8.18□□□□□ -1.1
TCF4-249ENST00000625716 HCLS1P14317 486 aaPredicted RBP8.18□□□□□ -1.1
TCF4-249ENST00000625716 HOXA10P31260 410 aaPredicted RBP8.18□□□□□ -1.1
TCF4-249ENST00000625716 FKBP4Q02790 459 aaKnown RBP eCLIP8.18□□□□□ -1.1
TCF4-249ENST00000625716 NEXNQ0ZGT2 675 aa8.18□□□□□ -1.1
TCF4-249ENST00000625716 LINC01559Q495D7 138 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms