RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 DDB1Q16531 1140 aa15.16■□□□□ 0.02
PSME3-217ENST00000622892 NBPF11Q86T75 865 aa15.16■□□□□ 0.02
PSME3-217ENST00000622892 FAM160A1Q05DH4 1040 aa15.16■□□□□ 0.02
PSME3-217ENST00000622892 TMC6Q7Z403 805 aa15.16■□□□□ 0.02
PSME3-217ENST00000622892 ENGASEQ8NFI3 743 aa15.16■□□□□ 0.02
PSME3-217ENST00000622892 ERO1AQ96HE7 468 aa15.16■□□□□ 0.02
PSME3-217ENST00000622892 CTAGE5O15320 804 aa15.16■□□□□ 0.02
PSME3-217ENST00000622892 DDX58O95786 925 aaKnown RBP15.16■□□□□ 0.02
PSME3-217ENST00000622892 POLR3DP05423 398 aaPredicted RBP15.16■□□□□ 0.02
PSME3-217ENST00000622892 HSPA1LP34931 641 aa15.16■□□□□ 0.02
PSME3-217ENST00000622892 PTPN21Q16825 1174 aa15.16■□□□□ 0.02
PSME3-217ENST00000622892 DPCR1Q3MIW9 517 aa15.16■□□□□ 0.02
PSME3-217ENST00000622892 ZNF446Q9NWS9 450 aa15.16■□□□□ 0.02
PSME3-217ENST00000622892 IFNKQ9P0W0 207 aa15.16■□□□□ 0.02
PSME3-217ENST00000622892 PDIA6Q15084 440 aa15.15■□□□□ 0.02
PSME3-217ENST00000622892 E4F1Q66K89 784 aaPredicted RBP15.15■□□□□ 0.02
PSME3-217ENST00000622892 RAB11FIP4Q86YS3 637 aa15.15■□□□□ 0.02
PSME3-217ENST00000622892 XPO4Q9C0E2 1151 aaKnown RBP15.15■□□□□ 0.02
PSME3-217ENST00000622892 GPHNQ9NQX3 736 aaPredicted RBP15.15■□□□□ 0.02
PSME3-217ENST00000622892 PCDHA7Q9UN72 937 aa15.15■□□□□ 0.02
PSME3-217ENST00000622892 MCMDC2Q4G0Z9 681 aa15.15■□□□□ 0.02
PSME3-217ENST00000622892 TNNI3KQ59H18 835 aa15.15■□□□□ 0.02
PSME3-217ENST00000622892 SMARCC2Q8TAQ2 1214 aa15.15■□□□□ 0.02
PSME3-217ENST00000622892 GJB4Q9NTQ9 266 aa15.15■□□□□ 0.02
PSME3-217ENST00000622892 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
PSME3-217ENST00000622892 FPGT-TNNI3KV9GXZ4 949 aa15.15■□□□□ 0.02
PSME3-217ENST00000622892 ZNF609O15014 1411 aa15.14■□□□□ 0.01
PSME3-217ENST00000622892 PFKFB2O60825 505 aa15.14■□□□□ 0.01
PSME3-217ENST00000622892 NDUFA8P51970 172 aa15.14■□□□□ 0.01
PSME3-217ENST00000622892 ZRSR1Q15695 479 aaKnown RBP15.14■□□□□ 0.01
PSME3-217ENST00000622892 TTLL7Q6ZT98 887 aa15.14■□□□□ 0.01
PSME3-217ENST00000622892 ILDR1Q86SU0 546 aaPredicted RBP15.14■□□□□ 0.01
PSME3-217ENST00000622892 DNAJC10Q8IXB1 793 aa15.14■□□□□ 0.01
PSME3-217ENST00000622892 SF3A1Q15459 793 aaKnown RBP15.14■□□□□ 0.01
PSME3-217ENST00000622892 NEUROD6Q96NK8 337 aa15.14■□□□□ 0.01
PSME3-217ENST00000622892 DDX21Q9NR30 783 aaKnown RBP eCLIP15.14■□□□□ 0.01
PSME3-217ENST00000622892 NEURL1BA8MQ27 555 aa15.14■□□□□ 0.01
PSME3-217ENST00000622892 KCNQ2O43526 872 aa15.14■□□□□ 0.01
PSME3-217ENST00000622892 ATP5JP18859 108 aa15.14■□□□□ 0.01
PSME3-217ENST00000622892 NEXNQ0ZGT2 675 aa15.14■□□□□ 0.01
PSME3-217ENST00000622892 ARMCX5Q6P1M9 558 aa15.14■□□□□ 0.01
PSME3-217ENST00000622892 DHX32Q7L7V1 743 aaKnown RBP15.14■□□□□ 0.01
PSME3-217ENST00000622892 CCDC85AQ96PX6 553 aaPredicted RBP15.14■□□□□ 0.01
PSME3-217ENST00000622892 GCKRQ14397 625 aa15.13■□□□□ 0.01
PSME3-217ENST00000622892 SMIM5Q71RC9 77 aa15.13■□□□□ 0.01
PSME3-217ENST00000622892 UBE3BQ7Z3V4 1068 aa15.13■□□□□ 0.01
PSME3-217ENST00000622892 GOLIM4O00461 696 aa15.13■□□□□ 0.01
PSME3-217ENST00000622892 NAA16Q6N069 864 aaPredicted RBP15.13■□□□□ 0.01
PSME3-217ENST00000622892 HOMER1Q86YM7 354 aa15.13■□□□□ 0.01
PSME3-217ENST00000622892 CERKQ8TCT0 537 aa15.13■□□□□ 0.01
PSME3-217ENST00000622892 ZNF396Q96N95 335 aaPredicted RBP15.13■□□□□ 0.01
PSME3-217ENST00000622892 PTPN12Q05209 780 aaKnown RBP15.12■□□□□ 0.01
PSME3-217ENST00000622892 PPP1R13BQ96KQ4 1090 aa15.12■□□□□ 0.01
PSME3-217ENST00000622892 NAT10Q9H0A0 1025 aaKnown RBP15.12■□□□□ 0.01
PSME3-217ENST00000622892 N4BP2Q86UW6 1770 aaPredicted RBP15.12■□□□□ 0.01
PSME3-217ENST00000622892 NBPF26B4DH59 902 aa15.12■□□□□ 0.01
PSME3-217ENST00000622892 LMOD1P29536 600 aaPredicted RBP15.12■□□□□ 0.01
PSME3-217ENST00000622892 NBPF14Q5TI25 921 aa15.12■□□□□ 0.01
PSME3-217ENST00000622892 TTLL5Q6EMB2 1281 aa15.12■□□□□ 0.01
PSME3-217ENST00000622892 NBPF10Q6P3W6 841 aaKnown RBP15.12■□□□□ 0.01
PSME3-217ENST00000622892 NBPF15Q8N660 670 aa15.12■□□□□ 0.01
PSME3-217ENST00000622892 MRPS27Q92552 414 aaKnown RBP15.12■□□□□ 0.01
PSME3-217ENST00000622892 TRERF1Q96PN7 1200 aa15.12■□□□□ 0.01
PSME3-217ENST00000622892 CLIC4Q9Y696 253 aa15.12■□□□□ 0.01
PSME3-217ENST00000622892 PTF1AQ7RTS3 328 aa15.12■□□□□ 0.01
PSME3-217ENST00000622892 FMR1NBQ8N0W7 255 aaPredicted RBP15.12■□□□□ 0.01
PSME3-217ENST00000622892 KDM3BQ7LBC6 1761 aa15.12■□□□□ 0.01
PSME3-217ENST00000622892 SFPQP23246 707 aaKnown RBP eCLIP15.11■□□□□ 0.01
PSME3-217ENST00000622892 TIMM10P62072 90 aa15.11■□□□□ 0.01
PSME3-217ENST00000622892 GOLGA8FQ08AF8 430 aa15.11■□□□□ 0.01
PSME3-217ENST00000622892 GOLGA8DPQ0D2H9 430 aa15.11■□□□□ 0.01
PSME3-217ENST00000622892 ANKRD13DQ6ZTN6 518 aa15.11■□□□□ 0.01
PSME3-217ENST00000622892 STK38Q15208 465 aa15.11■□□□□ 0.01
PSME3-217ENST00000622892 FAM177A1Q8N128 213 aaPredicted RBP15.11■□□□□ 0.01
PSME3-217ENST00000622892 SCN11AQ9UI33 1791 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 PDIA3P30101 505 aaKnown RBP15.1■□□□□ 0.01
PSME3-217ENST00000622892 GSDMDP57764 484 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 ARHGAP29Q52LW3 1261 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 LLPHQ9BRT6 129 aaKnown RBP15.1■□□□□ 0.01
PSME3-217ENST00000622892 KIAA1468Q9P260 1216 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 USP21Q9UK80 565 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 UTYO14607 1347 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 SPATA31A1Q5TZJ5 1347 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 ATP1A3P13637 1013 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 BBXQ8WY36 941 aaPredicted RBP15.1■□□□□ 0.01
PSME3-217ENST00000622892 ATG3Q9NT62 314 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 DNAI1Q9UI46 699 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 JCADQ9P266 1359 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 COL16A1Q07092 1604 aaPredicted RBP15.1■□□□□ 0.01
PSME3-217ENST00000622892 ERVV-2B6SEH9 535 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 E7EWF7 191 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 FDPSP14324 419 aaKnown RBP15.1■□□□□ 0.01
PSME3-217ENST00000622892 CLCN6P51797 869 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 HAND2P61296 217 aa15.1■□□□□ 0.01
PSME3-217ENST00000622892 MARCH10Q8NA82 808 aaPredicted RBP15.1■□□□□ 0.01
PSME3-217ENST00000622892 GPTP24298 496 aa15.09■□□□□ 0.01
PSME3-217ENST00000622892 OSBPL5Q9H0X9 879 aaPredicted RBP15.09■□□□□ 0.01
PSME3-217ENST00000622892 EPC1Q9H2F5 836 aa15.09■□□□□ 0.01
PSME3-217ENST00000622892 MAPK8IP2Q13387 824 aaPredicted RBP15.09■□□□□ 0.01
PSME3-217ENST00000622892 TMX1Q9H3N1 280 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms