RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 CHAF1AQ13111 956 aaPredicted RBP17.31■□□□□ 0.36
PCDHGC3-208ENST00000622836 FBXO33Q7Z6M2 555 aa17.31■□□□□ 0.36
PCDHGC3-208ENST00000622836 CEP350Q5VT06 3117 aa17.31■□□□□ 0.36
PCDHGC3-208ENST00000622836 F8W031 263 aaPredicted RBP17.3■□□□□ 0.36
PCDHGC3-208ENST00000622836 TFCP2Q12800 502 aa17.3■□□□□ 0.36
PCDHGC3-208ENST00000622836 PDE3AQ14432 1141 aa17.3■□□□□ 0.36
PCDHGC3-208ENST00000622836 CDC37L1Q7L3B6 337 aa17.3■□□□□ 0.36
PCDHGC3-208ENST00000622836 GLIS2Q9BZE0 524 aaPredicted RBP17.3■□□□□ 0.36
PCDHGC3-208ENST00000622836 PGAP2Q9UHJ9 254 aa17.3■□□□□ 0.36
PCDHGC3-208ENST00000622836 AKAP2Q9Y2D5 859 aa17.3■□□□□ 0.36
PCDHGC3-208ENST00000622836 TMEM88BA6NKF7 163 aa17.29■□□□□ 0.36
PCDHGC3-208ENST00000622836 TRAF5O00463 557 aa17.29■□□□□ 0.36
PCDHGC3-208ENST00000622836 MMP14P50281 582 aa17.29■□□□□ 0.36
PCDHGC3-208ENST00000622836 FKBP1AP62942 108 aaKnown RBP17.29■□□□□ 0.36
PCDHGC3-208ENST00000622836 SCARF1Q14162 830 aa17.29■□□□□ 0.36
PCDHGC3-208ENST00000622836 MFSD14BQ5SR56 506 aa17.29■□□□□ 0.36
PCDHGC3-208ENST00000622836 CERS5Q8N5B7 392 aa17.29■□□□□ 0.36
PCDHGC3-208ENST00000622836 CREBZFQ9NS37 354 aa17.29■□□□□ 0.36
PCDHGC3-208ENST00000622836 GNL3LQ9NVN8 582 aaKnown RBP17.29■□□□□ 0.36
PCDHGC3-208ENST00000622836 GGA3Q9NZ52 723 aa17.29■□□□□ 0.36
PCDHGC3-208ENST00000622836 FAM205AQ6ZU69 1335 aa17.28■□□□□ 0.36
PCDHGC3-208ENST00000622836 SURF6O75683 361 aaKnown RBP17.28■□□□□ 0.36
PCDHGC3-208ENST00000622836 POLA2Q14181 598 aa17.28■□□□□ 0.36
PCDHGC3-208ENST00000622836 C20orf194Q5TEA3 1177 aa17.28■□□□□ 0.36
PCDHGC3-208ENST00000622836 CEP85Q6P2H3 762 aa17.28■□□□□ 0.36
PCDHGC3-208ENST00000622836 KRT26Q7Z3Y9 468 aa17.28■□□□□ 0.36
PCDHGC3-208ENST00000622836 SULF1Q8IWU6 871 aa17.28■□□□□ 0.36
PCDHGC3-208ENST00000622836 SSH3Q8TE77 659 aa17.28■□□□□ 0.36
PCDHGC3-208ENST00000622836 ZNF408Q9H9D4 720 aa17.28■□□□□ 0.36
PCDHGC3-208ENST00000622836 RBM5P52756 815 aaKnown RBP eCLIP17.27■□□□□ 0.36
PCDHGC3-208ENST00000622836 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.36
PCDHGC3-208ENST00000622836 ANGEL2Q5VTE6 544 aaKnown RBP17.27■□□□□ 0.36
PCDHGC3-208ENST00000622836 USP48Q86UV5 1035 aa17.27■□□□□ 0.36
PCDHGC3-208ENST00000622836 TBC1D22AQ8WUA7 517 aa17.27■□□□□ 0.36
PCDHGC3-208ENST00000622836 NEUROD6Q96NK8 337 aa17.27■□□□□ 0.36
PCDHGC3-208ENST00000622836 ZNF646O15015 1829 aaPredicted RBP17.26■□□□□ 0.35
PCDHGC3-208ENST00000622836 ASTN2O75129 1339 aaPredicted RBP17.26■□□□□ 0.35
PCDHGC3-208ENST00000622836 A0A1B0GUL7 405 aa17.26■□□□□ 0.35
PCDHGC3-208ENST00000622836 TIMM10P62072 90 aa17.26■□□□□ 0.35
PCDHGC3-208ENST00000622836 DLGAP5Q15398 846 aa17.26■□□□□ 0.35
PCDHGC3-208ENST00000622836 NBPF9Q3BBW0 867 aa17.26■□□□□ 0.35
PCDHGC3-208ENST00000622836 ABT1Q9ULW3 272 aaKnown RBP17.26■□□□□ 0.35
PCDHGC3-208ENST00000622836 TTF2Q9UNY4 1162 aaKnown RBP17.26■□□□□ 0.35
PCDHGC3-208ENST00000622836 WNT10BO00744 389 aa17.25■□□□□ 0.35
PCDHGC3-208ENST00000622836 CELF2O95319 508 aaKnown RBP17.25■□□□□ 0.35
PCDHGC3-208ENST00000622836 ADORA1P30542 326 aa17.25■□□□□ 0.35
PCDHGC3-208ENST00000622836 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
PCDHGC3-208ENST00000622836 ZBTB40Q9NUA8 1239 aa17.25■□□□□ 0.35
PCDHGC3-208ENST00000622836 ADM5C9JUS6 153 aa17.24■□□□□ 0.35
PCDHGC3-208ENST00000622836 MYO1BO43795 1136 aa17.24■□□□□ 0.35
PCDHGC3-208ENST00000622836 HMMRO75330 724 aa17.24■□□□□ 0.35
PCDHGC3-208ENST00000622836 PHKA1P46020 1223 aa17.24■□□□□ 0.35
PCDHGC3-208ENST00000622836 CFAP100Q494V2 611 aa17.24■□□□□ 0.35
PCDHGC3-208ENST00000622836 XAGE2Q96GT9 111 aa17.24■□□□□ 0.35
PCDHGC3-208ENST00000622836 MKRN1Q9UHC7 482 aaKnown RBP17.24■□□□□ 0.35
PCDHGC3-208ENST00000622836 RRP1P56182 461 aaKnown RBP17.23■□□□□ 0.35
PCDHGC3-208ENST00000622836 CCDC102BQ68D86 513 aa17.23■□□□□ 0.35
PCDHGC3-208ENST00000622836 RPAP2Q8IXW5 612 aaPredicted RBP17.23■□□□□ 0.35
PCDHGC3-208ENST00000622836 DNAJC5GQ8N7S2 189 aa17.23■□□□□ 0.35
PCDHGC3-208ENST00000622836 WDR66Q8TBY9 1149 aa17.23■□□□□ 0.35
PCDHGC3-208ENST00000622836 KLRG1Q96E93 195 aa17.23■□□□□ 0.35
PCDHGC3-208ENST00000622836 PITPNM2Q9BZ72 1349 aa17.22■□□□□ 0.35
PCDHGC3-208ENST00000622836 SEMA3EO15041 775 aa17.22■□□□□ 0.35
PCDHGC3-208ENST00000622836 DLK2Q6UY11 383 aa17.22■□□□□ 0.35
PCDHGC3-208ENST00000622836 PAXIP1Q6ZW49 1069 aaPredicted RBP17.22■□□□□ 0.35
PCDHGC3-208ENST00000622836 DENND2AQ9ULE3 1009 aa17.22■□□□□ 0.35
PCDHGC3-208ENST00000622836 SCAF8Q9UPN6 1271 aaKnown RBP17.22■□□□□ 0.35
PCDHGC3-208ENST00000622836 EXOC6BQ9Y2D4 811 aa17.22■□□□□ 0.35
PCDHGC3-208ENST00000622836 NOP58Q9Y2X3 529 aaKnown RBP17.22■□□□□ 0.35
PCDHGC3-208ENST00000622836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.22■□□□□ 0.35
PCDHGC3-208ENST00000622836 POLR2AP24928 1970 aaKnown RBP17.22■□□□□ 0.35
PCDHGC3-208ENST00000622836 MYH13Q9UKX3 1938 aa17.21■□□□□ 0.35
PCDHGC3-208ENST00000622836 TRPM7Q96QT4 1865 aa17.21■□□□□ 0.35
PCDHGC3-208ENST00000622836 HSP90AB4PQ58FF6 505 aa17.21■□□□□ 0.35
PCDHGC3-208ENST00000622836 CST9Q5W186 159 aa17.21■□□□□ 0.35
PCDHGC3-208ENST00000622836 SERPINA10Q9UK55 444 aa17.21■□□□□ 0.35
PCDHGC3-208ENST00000622836 MAST3O60307 1309 aa17.21■□□□□ 0.34
PCDHGC3-208ENST00000622836 SPDYE2BA6NHP3 402 aa17.2■□□□□ 0.34
PCDHGC3-208ENST00000622836 SPDYE6P0CI01 402 aa17.2■□□□□ 0.34
PCDHGC3-208ENST00000622836 CRKP46108 304 aa17.2■□□□□ 0.34
PCDHGC3-208ENST00000622836 TNNI3KQ59H18 835 aa17.2■□□□□ 0.34
PCDHGC3-208ENST00000622836 ERC1Q8IUD2 1116 aa17.2■□□□□ 0.34
PCDHGC3-208ENST00000622836 APOBEC3FQ8IUX4 373 aaKnown RBP17.2■□□□□ 0.34
PCDHGC3-208ENST00000622836 MTMR14Q8NCE2 650 aa17.2■□□□□ 0.34
PCDHGC3-208ENST00000622836 CDCA5Q96FF9 252 aa17.2■□□□□ 0.34
PCDHGC3-208ENST00000622836 SUGT1Q9Y2Z0 365 aa17.2■□□□□ 0.34
PCDHGC3-208ENST00000622836 PCDHAC2Q9Y5I4 1007 aa17.2■□□□□ 0.34
PCDHGC3-208ENST00000622836 FPGT-TNNI3KV9GXZ4 949 aa17.2■□□□□ 0.34
PCDHGC3-208ENST00000622836 ARAP2Q8WZ64 1704 aa17.2■□□□□ 0.34
PCDHGC3-208ENST00000622836 CLRN2A0PK11 232 aa17.19■□□□□ 0.34
PCDHGC3-208ENST00000622836 APBB1O00213 710 aa17.19■□□□□ 0.34
PCDHGC3-208ENST00000622836 RASGRF1Q13972 1273 aa17.19■□□□□ 0.34
PCDHGC3-208ENST00000622836 GRIK5Q16478 980 aa17.19■□□□□ 0.34
PCDHGC3-208ENST00000622836 DEFB115Q30KQ5 88 aa17.19■□□□□ 0.34
PCDHGC3-208ENST00000622836 TEKT1Q969V4 418 aa17.19■□□□□ 0.34
PCDHGC3-208ENST00000622836 ZBED3Q96IU2 234 aaPredicted RBP17.19■□□□□ 0.34
PCDHGC3-208ENST00000622836 VEZTQ9HBM0 779 aa17.19■□□□□ 0.34
PCDHGC3-208ENST00000622836 GPR108Q9NPR9 543 aa17.19■□□□□ 0.34
PCDHGC3-208ENST00000622836 COL1A1P02452 1464 aaPredicted RBP17.18■□□□□ 0.34
PCDHGC3-208ENST00000622836 CNTNAP1P78357 1384 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms