RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CHMLP26374 656 aa21.58■■□□□ 1.05
PTCHD3-202ENST00000622555 TTF1Q15361 905 aaPredicted RBP21.58■■□□□ 1.05
PTCHD3-202ENST00000622555 TDRD7Q8NHU6 1098 aaKnown RBP21.58■■□□□ 1.05
PTCHD3-202ENST00000622555 G3V3G9 751 aa21.58■■□□□ 1.04
PTCHD3-202ENST00000622555 DCAF8Q5TAQ9 597 aa21.58■■□□□ 1.04
PTCHD3-202ENST00000622555 PSMD1Q99460 953 aa21.58■■□□□ 1.04
PTCHD3-202ENST00000622555 SYT17Q9BSW7 474 aa21.58■■□□□ 1.04
PTCHD3-202ENST00000622555 COA1Q9GZY4 146 aa21.58■■□□□ 1.04
PTCHD3-202ENST00000622555 CHD4Q14839 1912 aa21.57■■□□□ 1.04
PTCHD3-202ENST00000622555 DOCK2Q92608 1830 aa21.57■■□□□ 1.04
PTCHD3-202ENST00000622555 IL1R1P14778 569 aa21.57■■□□□ 1.04
PTCHD3-202ENST00000622555 CHAF1AQ13111 956 aaPredicted RBP21.57■■□□□ 1.04
PTCHD3-202ENST00000622555 PIH1D3Q9NQM4 214 aaKnown RBP21.57■■□□□ 1.04
PTCHD3-202ENST00000622555 DIAPH3Q9NSV4 1193 aa21.57■■□□□ 1.04
PTCHD3-202ENST00000622555 PDS5AQ29RF7 1337 aaKnown RBP21.56■■□□□ 1.04
PTCHD3-202ENST00000622555 RFX7Q2KHR2 1363 aa21.56■■□□□ 1.04
PTCHD3-202ENST00000622555 DOK7Q18PE1 504 aa21.56■■□□□ 1.04
PTCHD3-202ENST00000622555 HIP1O00291 1037 aa21.55■■□□□ 1.04
PTCHD3-202ENST00000622555 ZBTB22O15209 634 aa21.55■■□□□ 1.04
PTCHD3-202ENST00000622555 AOC3Q16853 763 aa21.55■■□□□ 1.04
PTCHD3-202ENST00000622555 KIAA2012Q0VF49 1180 aa21.55■■□□□ 1.04
PTCHD3-202ENST00000622555 JAG2Q9Y219 1238 aa21.55■■□□□ 1.04
PTCHD3-202ENST00000622555 PPIP5K2O43314 1243 aa21.54■■□□□ 1.04
PTCHD3-202ENST00000622555 IDH1O75874 414 aaKnown RBP21.54■■□□□ 1.04
PTCHD3-202ENST00000622555 LRRFIP1Q32MZ4 808 aaKnown RBP21.54■■□□□ 1.04
PTCHD3-202ENST00000622555 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.54■■□□□ 1.04
PTCHD3-202ENST00000622555 CWC27Q6UX04 472 aaKnown RBP21.53■■□□□ 1.04
PTCHD3-202ENST00000622555 DBNDD1Q9H9R9 158 aa21.53■■□□□ 1.04
PTCHD3-202ENST00000622555 ZNF277Q9NRM2 450 aaPredicted RBP21.53■■□□□ 1.04
PTCHD3-202ENST00000622555 ABCF2Q9UG63 623 aa21.53■■□□□ 1.04
PTCHD3-202ENST00000622555 TICAM2Q86XR7 235 aa21.52■■□□□ 1.04
PTCHD3-202ENST00000622555 TAOK3Q9H2K8 898 aa21.52■■□□□ 1.04
PTCHD3-202ENST00000622555 LRP2BPQ9P2M1 347 aa21.52■■□□□ 1.04
PTCHD3-202ENST00000622555 CCDC88AQ3V6T2 1871 aa21.52■■□□□ 1.04
PTCHD3-202ENST00000622555 RNF113AO15541 343 aaKnown RBP21.52■■□□□ 1.03
PTCHD3-202ENST00000622555 SEC24BO95487 1268 aa21.52■■□□□ 1.03
PTCHD3-202ENST00000622555 NMIQ13287 307 aaPredicted RBP21.52■■□□□ 1.03
PTCHD3-202ENST00000622555 WDR66Q8TBY9 1149 aa21.52■■□□□ 1.03
PTCHD3-202ENST00000622555 RUFY2Q8WXA3 655 aa21.52■■□□□ 1.03
PTCHD3-202ENST00000622555 ESYT1Q9BSJ8 1104 aa21.52■■□□□ 1.03
PTCHD3-202ENST00000622555 ECE2O60344 883 aa21.51■■□□□ 1.03
PTCHD3-202ENST00000622555 CHGBP05060 677 aa21.51■■□□□ 1.03
PTCHD3-202ENST00000622555 MAP3K12Q12852 859 aa21.51■■□□□ 1.03
PTCHD3-202ENST00000622555 ZSCAN25Q6NSZ9 544 aa21.51■■□□□ 1.03
PTCHD3-202ENST00000622555 FAM227BQ96M60 508 aa21.51■■□□□ 1.03
PTCHD3-202ENST00000622555 NFKBIEO00221 500 aa21.5■■□□□ 1.03
PTCHD3-202ENST00000622555 ZFYP08048 801 aaPredicted RBP21.5■■□□□ 1.03
PTCHD3-202ENST00000622555 MFAP1P55081 439 aaKnown RBP21.5■■□□□ 1.03
PTCHD3-202ENST00000622555 PODNQ7Z5L7 613 aa21.5■■□□□ 1.03
PTCHD3-202ENST00000622555 LARGE2Q8N3Y3 721 aa21.5■■□□□ 1.03
PTCHD3-202ENST00000622555 FBXW7Q969H0 707 aa21.5■■□□□ 1.03
PTCHD3-202ENST00000622555 VPS33BQ9H267 617 aa21.5■■□□□ 1.03
PTCHD3-202ENST00000622555 RAI14Q9P0K7 980 aa21.5■■□□□ 1.03
PTCHD3-202ENST00000622555 SCN9AQ15858 1988 aa21.5■■□□□ 1.03
PTCHD3-202ENST00000622555 A0A0D9SFI3 127 aa21.49■■□□□ 1.03
PTCHD3-202ENST00000622555 GTF2IP78347 998 aa21.49■■□□□ 1.03
PTCHD3-202ENST00000622555 SLC9C2Q5TAH2 1124 aa21.49■■□□□ 1.03
PTCHD3-202ENST00000622555 ZGPATQ8N5A5 531 aaKnown RBP21.49■■□□□ 1.03
PTCHD3-202ENST00000622555 SALL1Q9NSC2 1324 aa21.49■■□□□ 1.03
PTCHD3-202ENST00000622555 IARSP41252 1262 aaKnown RBP21.49■■□□□ 1.03
PTCHD3-202ENST00000622555 SLFNL1Q499Z3 407 aa21.49■■□□□ 1.03
PTCHD3-202ENST00000622555 FAM205AQ6ZU69 1335 aa21.49■■□□□ 1.03
PTCHD3-202ENST00000622555 ERICH6Q7L0X2 663 aa21.49■■□□□ 1.03
PTCHD3-202ENST00000622555 MAST2Q6P0Q8 1798 aa21.48■■□□□ 1.03
PTCHD3-202ENST00000622555 EIF5BO60841 1220 aaKnown RBP21.48■■□□□ 1.03
PTCHD3-202ENST00000622555 PDE6AP16499 860 aa21.48■■□□□ 1.03
PTCHD3-202ENST00000622555 ADD2P35612 726 aa21.48■■□□□ 1.03
PTCHD3-202ENST00000622555 SPTY2D1Q68D10 685 aaPredicted RBP21.48■■□□□ 1.03
PTCHD3-202ENST00000622555 MAGEB6Q8N7X4 407 aa21.48■■□□□ 1.03
PTCHD3-202ENST00000622555 IL25Q9H293 177 aa21.48■■□□□ 1.03
PTCHD3-202ENST00000622555 LTBP3Q9NS15 1303 aa21.47■■□□□ 1.03
PTCHD3-202ENST00000622555 SGSM2O43147 1006 aa21.47■■□□□ 1.03
PTCHD3-202ENST00000622555 ZMYM1Q5SVZ6 1142 aa21.47■■□□□ 1.03
PTCHD3-202ENST00000622555 TTLL5Q6EMB2 1281 aa21.47■■□□□ 1.03
PTCHD3-202ENST00000622555 TBC1D22AQ8WUA7 517 aa21.47■■□□□ 1.03
PTCHD3-202ENST00000622555 RAD50Q92878 1312 aa21.47■■□□□ 1.03
PTCHD3-202ENST00000622555 ZNF532Q9HCE3 1301 aa21.47■■□□□ 1.03
PTCHD3-202ENST00000622555 PRDX5P30044 214 aa21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 RASSF7Q02833 373 aa21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 MFSD14BQ5SR56 506 aa21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 COL4A5P29400 1685 aa21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 PSME4Q14997 1843 aa21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 REC8O95072 547 aa21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 LDHBP07195 334 aaKnown RBP21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 UBE3CQ15386 1083 aa21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 NIM1KQ8IY84 436 aa21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 APPBP2Q92624 585 aa21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 SEC62Q99442 399 aaKnown RBP21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 KCNQ5Q9NR82 932 aa21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 HELLSQ9NRZ9 838 aa21.46■■□□□ 1.03
PTCHD3-202ENST00000622555 GOLGB1Q14789 3259 aaKnown RBP21.45■■□□□ 1.03
PTCHD3-202ENST00000622555 ZNF646O15015 1829 aaPredicted RBP21.45■■□□□ 1.02
PTCHD3-202ENST00000622555 MCMDC2Q4G0Z9 681 aa21.45■■□□□ 1.02
PTCHD3-202ENST00000622555 ARHGAP27Q6ZUM4 889 aa21.45■■□□□ 1.02
PTCHD3-202ENST00000622555 UPF2Q9HAU5 1272 aaKnown RBP21.45■■□□□ 1.02
PTCHD3-202ENST00000622555 TCRBV5S4A2TA0A5A2 114 aa21.44■■□□□ 1.02
PTCHD3-202ENST00000622555 DZIP1Q86YF9 867 aaKnown RBP21.44■■□□□ 1.02
PTCHD3-202ENST00000622555 OSBP2Q969R2 916 aa21.44■■□□□ 1.02
PTCHD3-202ENST00000622555 YDJCA8MPS7 323 aa21.43■■□□□ 1.02
PTCHD3-202ENST00000622555 MECOMQ03112 1051 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms