RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 KCNV1Q6PIU1 500 aa8.65□□□□□ -1.02
TRIM49B-202ENST00000622138 LRRC31Q6UY01 552 aa8.65□□□□□ -1.02
TRIM49B-202ENST00000622138 CCDC150Q8NCX0 1101 aa8.65□□□□□ -1.02
TRIM49B-202ENST00000622138 LRRC59Q96AG4 307 aaKnown RBP8.65□□□□□ -1.02
TRIM49B-202ENST00000622138 RBM33Q96EV2 1170 aaKnown RBP8.65□□□□□ -1.02
TRIM49B-202ENST00000622138 VEZTQ9HBM0 779 aa8.65□□□□□ -1.02
TRIM49B-202ENST00000622138 TRMT1Q9NXH9 659 aaKnown RBP8.65□□□□□ -1.02
TRIM49B-202ENST00000622138 IMPACTQ9P2X3 320 aa8.65□□□□□ -1.02
TRIM49B-202ENST00000622138 MCM8Q9UJA3 840 aa8.65□□□□□ -1.02
TRIM49B-202ENST00000622138 PRAMEF22A3QJZ6 481 aa8.65□□□□□ -1.03
TRIM49B-202ENST00000622138 INHBEP58166 350 aa8.65□□□□□ -1.03
TRIM49B-202ENST00000622138 ICA1Q05084 483 aa8.65□□□□□ -1.03
TRIM49B-202ENST00000622138 CRYMQ14894 314 aa8.65□□□□□ -1.03
TRIM49B-202ENST00000622138 FOXR1Q6PIV2 292 aa8.65□□□□□ -1.03
TRIM49B-202ENST00000622138 CNTROBQ8N137 903 aa8.65□□□□□ -1.03
TRIM49B-202ENST00000622138 OSBPL5Q9H0X9 879 aaPredicted RBP8.65□□□□□ -1.03
TRIM49B-202ENST00000622138 ETAA1Q9NY74 926 aa8.65□□□□□ -1.03
TRIM49B-202ENST00000622138 VPS18Q9P253 973 aa8.65□□□□□ -1.03
TRIM49B-202ENST00000622138 ADGRL3Q9HAR2 1447 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 ATXN2Q99700 1313 aaKnown RBP8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 GOLGA6L19H0YKK7 550 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 GPTP24298 496 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 ZNF165P49910 485 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 ETF1P62495 437 aaKnown RBP8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 ADCY2Q08462 1091 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 APOBRQ0VD83 1088 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 AP1ARQ63HQ0 302 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 MPRIPQ6WCQ1 1025 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 CCDC83Q8IWF9 413 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 FAM71BQ8TC56 605 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 HNRNPLLQ8WVV9 542 aaKnown RBP8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 RABGGTAQ92696 567 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 KAT2BQ92831 832 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 TNMDQ9H2S6 317 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 HYPKQ9NX55 129 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 LIMCH1Q9UPQ0 1083 aa8.64□□□□□ -1.03
TRIM49B-202ENST00000622138 IPO7O95373 1038 aaKnown RBP8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 NEFHP12036 1026 aa8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 OS9Q13438 667 aaPredicted RBP8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 LONRF2Q1L5Z9 754 aa8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 PRPF40BQ6NWY9 871 aaKnown RBP8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 IP6K1Q92551 441 aa8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 NUCKS1Q9H1E3 243 aaKnown RBP8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 CLSTN2Q9H4D0 955 aa8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 FER1L4A9Z1Z3 1794 aa8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 POTEB2H3BUK9 544 aa8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 NEBLO76041 1014 aa8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 MRPL12P52815 198 aaKnown RBP8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 MTX1Q13505 466 aa8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 CWF19L2Q2TBE0 894 aaKnown RBP8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 ZC3H12AQ5D1E8 599 aaKnown RBP8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 E4F1Q66K89 784 aaPredicted RBP8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 ZNF530Q6P9A1 599 aaPredicted RBP8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 JAKMIP1Q96N16 626 aaKnown RBP8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 SH3GL3Q99963 347 aa8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 PAIP2Q9BPZ3 127 aaKnown RBP8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 TRIM6Q9C030 488 aaPredicted RBP8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 ACBD3Q9H3P7 528 aa8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 MTMR6Q9Y217 621 aa8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 MAP3K2Q9Y2U5 619 aa8.63□□□□□ -1.03
TRIM49B-202ENST00000622138 GLRX3O76003 335 aaKnown RBP8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 HOXB7P09629 217 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 GJB2P29033 226 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 NF2P35240 595 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 PREPLQ4J6C6 727 aaPredicted RBP8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 NAIF1Q69YI7 327 aaPredicted RBP8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 RSRC2Q7L4I2 434 aaKnown RBP8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 HDXQ7Z353 690 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 NECAB1Q8N987 351 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 PRPF38AQ8NAV1 312 aaKnown RBP8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 TATDN2Q93075 761 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 CABS1Q96KC9 395 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 TLR7Q9NYK1 1049 aaKnown RBP8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 PHF8Q9UPP1 1060 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 SMC3Q9UQE7 1217 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 AKAP2Q9Y2D5 859 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 TAF6LQ9Y6J9 622 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 NPHP3Q7Z494 1330 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 ANKRD18BA2A2Z9 1011 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 BTBD11A6QL63 1104 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 RDXP35241 583 aaKnown RBP8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 DNM1Q05193 864 aaKnown RBP8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 PSME1Q06323 249 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 SCRN1Q12765 414 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 GRIK3Q13003 919 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 CPLX2Q6PUV4 134 aaKnown RBP8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 ERCC4Q92889 916 aaPredicted RBP8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 BORCS6Q96GS4 357 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 KAZALD1Q96I82 304 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 FAM227BQ96M60 508 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 CARD6Q9BX69 1037 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 TEX13AQ9BXU3 409 aaPredicted RBP8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 ECHDC1Q9NTX5 307 aa8.62□□□□□ -1.03
TRIM49B-202ENST00000622138 CHUKO15111 745 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 ARID5BQ14865 1188 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 IQCB1Q15051 598 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 ME3Q16798 604 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 AACSQ86V21 672 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 CNNM3Q8NE01 707 aa8.61□□□□□ -1.03
TRIM49B-202ENST00000622138 N4BP2L2Q92802 583 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms