RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 KIAA1468Q9P260 1216 aa18.35■□□□□ 0.53
NPHP4-211ENST00000622020 ORC3Q9UBD5 711 aaPredicted RBP18.35■□□□□ 0.53
NPHP4-211ENST00000622020 A0A1B0GUL7 405 aa18.34■□□□□ 0.53
NPHP4-211ENST00000622020 GOLGA8BA8MQT2 603 aa18.34■□□□□ 0.53
NPHP4-211ENST00000622020 SLC3A2P08195 630 aaKnown RBP18.34■□□□□ 0.53
NPHP4-211ENST00000622020 KRT28Q7Z3Y7 464 aa18.34■□□□□ 0.53
NPHP4-211ENST00000622020 LINC00301Q8NCQ3 95 aa18.34■□□□□ 0.53
NPHP4-211ENST00000622020 KIF28PB7ZC32 967 aa18.33■□□□□ 0.53
NPHP4-211ENST00000622020 TATP17735 454 aaPredicted RBP18.33■□□□□ 0.53
NPHP4-211ENST00000622020 SFPQP23246 707 aaKnown RBP eCLIP18.33■□□□□ 0.53
NPHP4-211ENST00000622020 SYNE3Q6ZMZ3 975 aa18.33■□□□□ 0.53
NPHP4-211ENST00000622020 SPTLC2O15270 562 aa18.33■□□□□ 0.52
NPHP4-211ENST00000622020 ZNF202O95125 648 aa18.33■□□□□ 0.52
NPHP4-211ENST00000622020 ZMYM1Q5SVZ6 1142 aa18.33■□□□□ 0.52
NPHP4-211ENST00000622020 ADALQ6DHV7 355 aa18.33■□□□□ 0.52
NPHP4-211ENST00000622020 LRP10Q7Z4F1 713 aa18.33■□□□□ 0.52
NPHP4-211ENST00000622020 ERBB3P21860 1342 aa18.33■□□□□ 0.52
NPHP4-211ENST00000622020 NEMFO60524 1076 aa18.33■□□□□ 0.52
NPHP4-211ENST00000622020 KIF20AO95235 890 aa18.33■□□□□ 0.52
NPHP4-211ENST00000622020 SLU7O95391 586 aaKnown RBP18.33■□□□□ 0.52
NPHP4-211ENST00000622020 A1BGP04217 495 aa18.33■□□□□ 0.52
NPHP4-211ENST00000622020 ADORA1P30542 326 aa18.33■□□□□ 0.52
NPHP4-211ENST00000622020 RABL6Q3YEC7 729 aaPredicted RBP18.33■□□□□ 0.52
NPHP4-211ENST00000622020 ZNF397Q8NF99 534 aaPredicted RBP18.33■□□□□ 0.52
NPHP4-211ENST00000622020 RNF113AO15541 343 aaKnown RBP18.32■□□□□ 0.52
NPHP4-211ENST00000622020 CABP4P57796 275 aa18.32■□□□□ 0.52
NPHP4-211ENST00000622020 FOXO4P98177 505 aa18.32■□□□□ 0.52
NPHP4-211ENST00000622020 PPP1R13BQ96KQ4 1090 aa18.32■□□□□ 0.52
NPHP4-211ENST00000622020 SH3TC1Q8TE82 1336 aa18.32■□□□□ 0.52
NPHP4-211ENST00000622020 PRC1O43663 620 aa18.32■□□□□ 0.52
NPHP4-211ENST00000622020 DSCC1Q9BVC3 393 aa18.32■□□□□ 0.52
NPHP4-211ENST00000622020 HELLSQ9NRZ9 838 aa18.32■□□□□ 0.52
NPHP4-211ENST00000622020 SLIT1O75093 1534 aa18.32■□□□□ 0.52
NPHP4-211ENST00000622020 ARHGAP23Q9P227 1491 aa18.32■□□□□ 0.52
NPHP4-211ENST00000622020 CHD2O14647 1828 aaKnown RBP18.31■□□□□ 0.52
NPHP4-211ENST00000622020 CYP27B1O15528 508 aa18.31■□□□□ 0.52
NPHP4-211ENST00000622020 DNAI1Q9UI46 699 aa18.31■□□□□ 0.52
NPHP4-211ENST00000622020 SALL1Q9NSC2 1324 aa18.31■□□□□ 0.52
NPHP4-211ENST00000622020 KDM6AO15550 1401 aaPredicted RBP18.31■□□□□ 0.52
NPHP4-211ENST00000622020 FGAP02671 866 aa18.31■□□□□ 0.52
NPHP4-211ENST00000622020 SCARF1Q14162 830 aa18.31■□□□□ 0.52
NPHP4-211ENST00000622020 SPECC1Q5M775 1068 aa18.31■□□□□ 0.52
NPHP4-211ENST00000622020 KRT222Q8N1A0 295 aa18.31■□□□□ 0.52
NPHP4-211ENST00000622020 DPF2Q92785 391 aa18.31■□□□□ 0.52
NPHP4-211ENST00000622020 EPC1Q9H2F5 836 aa18.31■□□□□ 0.52
NPHP4-211ENST00000622020 RTEL1Q9NZ71 1219 aa18.31■□□□□ 0.52
NPHP4-211ENST00000622020 SYCP1Q15431 976 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 MYSM1Q5VVJ2 828 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 ANKLE2Q86XL3 938 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 NKX2-3Q8TAU0 364 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 ERO1AQ96HE7 468 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 MORC2Q9Y6X9 1032 aaPredicted RBP18.3■□□□□ 0.52
NPHP4-211ENST00000622020 NBPF26B4DH59 902 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 UBE2Q2LH0YL09 131 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 WDHD1O75717 1129 aaPredicted RBP18.3■□□□□ 0.52
NPHP4-211ENST00000622020 SLFN14P0C7P3 912 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 PFKFB1P16118 471 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 NBPF14Q5TI25 921 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 NBPF10Q6P3W6 841 aaKnown RBP18.3■□□□□ 0.52
NPHP4-211ENST00000622020 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 NBPF15Q8N660 670 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 ZNF274Q96GC6 653 aaPredicted RBP18.3■□□□□ 0.52
NPHP4-211ENST00000622020 PUS7LQ9H0K6 701 aaKnown RBP18.3■□□□□ 0.52
NPHP4-211ENST00000622020 ZNF446Q9NWS9 450 aa18.3■□□□□ 0.52
NPHP4-211ENST00000622020 CASP7P55210 303 aa18.29■□□□□ 0.52
NPHP4-211ENST00000622020 GNL2Q13823 731 aaKnown RBP18.29■□□□□ 0.52
NPHP4-211ENST00000622020 PHKBQ93100 1093 aa18.29■□□□□ 0.52
NPHP4-211ENST00000622020 CLIC6Q96NY7 704 aa18.29■□□□□ 0.52
NPHP4-211ENST00000622020 ZBTB22O15209 634 aa18.29■□□□□ 0.52
NPHP4-211ENST00000622020 SERPINC1P01008 464 aa18.29■□□□□ 0.52
NPHP4-211ENST00000622020 GSDMDP57764 484 aa18.29■□□□□ 0.52
NPHP4-211ENST00000622020 APPP05067 770 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 PNOCQ13519 176 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 CFAP100Q494V2 611 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 FBXO18Q8NFZ0 1043 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 NCAPD2Q15021 1401 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 FANCCQ00597 558 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 TTC39AQ5SRH9 613 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 RALYLQ86SE5 291 aaKnown RBP18.28■□□□□ 0.52
NPHP4-211ENST00000622020 PLBD2Q8NHP8 589 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 BBXQ8WY36 941 aaPredicted RBP18.28■□□□□ 0.52
NPHP4-211ENST00000622020 MYL10Q9BUA6 226 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 UTP14AQ9BVJ6 771 aaKnown RBP18.28■□□□□ 0.52
NPHP4-211ENST00000622020 INCENPQ9NQS7 918 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 PALLDQ8WX93 1383 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 LMO7Q8WWI1 1683 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 IMMTQ16891 758 aaKnown RBP18.28■□□□□ 0.52
NPHP4-211ENST00000622020 AGXT2Q9BYV1 514 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 MROH7-TTC4A0A0A0MT08 1334 aa18.28■□□□□ 0.52
NPHP4-211ENST00000622020 ARHGAP29Q52LW3 1261 aa18.27■□□□□ 0.52
NPHP4-211ENST00000622020 EYA2O00167 538 aa18.27■□□□□ 0.51
NPHP4-211ENST00000622020 FOXP2O15409 715 aa18.27■□□□□ 0.51
NPHP4-211ENST00000622020 ZAP70P43403 619 aa18.27■□□□□ 0.51
NPHP4-211ENST00000622020 ANO1Q5XXA6 986 aa18.27■□□□□ 0.51
NPHP4-211ENST00000622020 KCNG4Q8TDN1 519 aa18.27■□□□□ 0.51
NPHP4-211ENST00000622020 CWC25Q9NXE8 425 aaPredicted RBP18.27■□□□□ 0.51
NPHP4-211ENST00000622020 CEP126Q9P2H0 1117 aa18.27■□□□□ 0.51
NPHP4-211ENST00000622020 HPS5Q9UPZ3 1129 aa18.27■□□□□ 0.51
NPHP4-211ENST00000622020 TMEM232C9JQI7 657 aa18.26■□□□□ 0.51
NPHP4-211ENST00000622020 URI1O94763 535 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms