RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ATG9AQ7Z3C6 839 aa22.77■■□□□ 1.24
PDLIM3-212ENST00000620787 KIF1AQ12756 1690 aa22.77■■□□□ 1.24
PDLIM3-212ENST00000620787 EVCP57679 992 aa22.77■■□□□ 1.24
PDLIM3-212ENST00000620787 STK38Q15208 465 aa22.77■■□□□ 1.24
PDLIM3-212ENST00000620787 CCDC93Q567U6 631 aa22.77■■□□□ 1.24
PDLIM3-212ENST00000620787 OTUD7BQ6GQQ9 843 aa22.77■■□□□ 1.24
PDLIM3-212ENST00000620787 TICAM2Q86XR7 235 aa22.77■■□□□ 1.24
PDLIM3-212ENST00000620787 FBXL16Q8N461 479 aa22.77■■□□□ 1.24
PDLIM3-212ENST00000620787 TRPM3Q9HCF6 1732 aaPredicted RBP22.76■■□□□ 1.23
PDLIM3-212ENST00000620787 YEATS4O95619 227 aa22.76■■□□□ 1.23
PDLIM3-212ENST00000620787 KCNG4Q8TDN1 519 aa22.76■■□□□ 1.23
PDLIM3-212ENST00000620787 CHMP4CQ96CF2 233 aa22.76■■□□□ 1.23
PDLIM3-212ENST00000620787 NEUROD6Q96NK8 337 aa22.76■■□□□ 1.23
PDLIM3-212ENST00000620787 NCAPHQ15003 741 aa22.76■■□□□ 1.23
PDLIM3-212ENST00000620787 GPHNQ9NQX3 736 aaPredicted RBP22.76■■□□□ 1.23
PDLIM3-212ENST00000620787 POLR3EQ9NVU0 708 aa22.76■■□□□ 1.23
PDLIM3-212ENST00000620787 H2AFXP16104 143 aaPredicted RBP22.75■■□□□ 1.23
PDLIM3-212ENST00000620787 SFPQP23246 707 aaKnown RBP eCLIP22.75■■□□□ 1.23
PDLIM3-212ENST00000620787 NLRP12P59046 1061 aa22.75■■□□□ 1.23
PDLIM3-212ENST00000620787 TAF3Q5VWG9 929 aa22.75■■□□□ 1.23
PDLIM3-212ENST00000620787 TTLL5Q6EMB2 1281 aa22.75■■□□□ 1.23
PDLIM3-212ENST00000620787 SYT10Q6XYQ8 523 aa22.75■■□□□ 1.23
PDLIM3-212ENST00000620787 LRRN4CLQ8ND94 238 aa22.75■■□□□ 1.23
PDLIM3-212ENST00000620787 SNRPA1P09661 255 aaKnown RBP22.75■■□□□ 1.23
PDLIM3-212ENST00000620787 FOXO4P98177 505 aa22.75■■□□□ 1.23
PDLIM3-212ENST00000620787 SF3A1Q15459 793 aaKnown RBP22.75■■□□□ 1.23
PDLIM3-212ENST00000620787 ZRSR1Q15695 479 aaKnown RBP22.75■■□□□ 1.23
PDLIM3-212ENST00000620787 M0R2C6 588 aa22.74■■□□□ 1.23
PDLIM3-212ENST00000620787 SPTLC2O15270 562 aa22.74■■□□□ 1.23
PDLIM3-212ENST00000620787 RNF113AO15541 343 aaKnown RBP22.74■■□□□ 1.23
PDLIM3-212ENST00000620787 TIMM10P62072 90 aa22.74■■□□□ 1.23
PDLIM3-212ENST00000620787 GPR108Q9NPR9 543 aa22.74■■□□□ 1.23
PDLIM3-212ENST00000620787 LAMB4A4D0S4 1761 aa22.74■■□□□ 1.23
PDLIM3-212ENST00000620787 POLR3DP05423 398 aaPredicted RBP22.74■■□□□ 1.23
PDLIM3-212ENST00000620787 SLC3A2P08195 630 aaKnown RBP22.74■■□□□ 1.23
PDLIM3-212ENST00000620787 PHKG2P15735 406 aa22.74■■□□□ 1.23
PDLIM3-212ENST00000620787 ERCC6LQ2NKX8 1250 aa22.74■■□□□ 1.23
PDLIM3-212ENST00000620787 SYTL4Q96C24 671 aaPredicted RBP22.74■■□□□ 1.23
PDLIM3-212ENST00000620787 C8orf76Q96K31 380 aa22.74■■□□□ 1.23
PDLIM3-212ENST00000620787 TJP1Q07157 1748 aa22.73■■□□□ 1.23
PDLIM3-212ENST00000620787 BIN1O00499 593 aa22.73■■□□□ 1.23
PDLIM3-212ENST00000620787 NPHP1O15259 732 aa22.72■■□□□ 1.23
PDLIM3-212ENST00000620787 ZNF202O95125 648 aa22.72■■□□□ 1.23
PDLIM3-212ENST00000620787 C4AP0C0L4 1744 aa22.72■■□□□ 1.23
PDLIM3-212ENST00000620787 C4BP0C0L5 1744 aa22.72■■□□□ 1.23
PDLIM3-212ENST00000620787 GLI3P10071 1580 aa22.72■■□□□ 1.23
PDLIM3-212ENST00000620787 MYSM1Q5VVJ2 828 aa22.72■■□□□ 1.23
PDLIM3-212ENST00000620787 ORAI2Q96SN7 254 aa22.72■■□□□ 1.23
PDLIM3-212ENST00000620787 DHX8Q14562 1220 aaKnown RBP22.72■■□□□ 1.23
PDLIM3-212ENST00000620787 LMOD2Q6P5Q4 547 aa22.72■■□□□ 1.23
PDLIM3-212ENST00000620787 FBXO18Q8NFZ0 1043 aa22.72■■□□□ 1.23
PDLIM3-212ENST00000620787 AXDND1Q5T1B0 1012 aaPredicted RBP22.71■■□□□ 1.23
PDLIM3-212ENST00000620787 BRAPQ7Z569 592 aa22.71■■□□□ 1.23
PDLIM3-212ENST00000620787 RAPGEF4Q8WZA2 1011 aa22.71■■□□□ 1.23
PDLIM3-212ENST00000620787 FMNL2Q96PY5 1086 aa22.71■■□□□ 1.23
PDLIM3-212ENST00000620787 ST7Q9NRC1 585 aa22.71■■□□□ 1.23
PDLIM3-212ENST00000620787 TPM4P67936 248 aa22.71■■□□□ 1.23
PDLIM3-212ENST00000620787 PLBD2Q8NHP8 589 aa22.71■■□□□ 1.23
PDLIM3-212ENST00000620787 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.71■■□□□ 1.23
PDLIM3-212ENST00000620787 TMEM94Q12767 1356 aa22.7■■□□□ 1.23
PDLIM3-212ENST00000620787 KIF28PB7ZC32 967 aa22.7■■□□□ 1.22
PDLIM3-212ENST00000620787 H7C1W4 665 aa22.7■■□□□ 1.22
PDLIM3-212ENST00000620787 TUBB4AP04350 444 aa22.7■■□□□ 1.22
PDLIM3-212ENST00000620787 IFIT1P09914 478 aaKnown RBP22.7■■□□□ 1.22
PDLIM3-212ENST00000620787 HSD3B7Q9H2F3 369 aa22.7■■□□□ 1.22
PDLIM3-212ENST00000620787 HPS5Q9UPZ3 1129 aa22.7■■□□□ 1.22
PDLIM3-212ENST00000620787 MROH7-TTC4A0A0A0MT08 1334 aa22.7■■□□□ 1.22
PDLIM3-212ENST00000620787 PFKFB1P16118 471 aa22.7■■□□□ 1.22
PDLIM3-212ENST00000620787 FANCCQ00597 558 aa22.7■■□□□ 1.22
PDLIM3-212ENST00000620787 OSBP2Q969R2 916 aa22.7■■□□□ 1.22
PDLIM3-212ENST00000620787 NUP188Q5SRE5 1749 aa22.7■■□□□ 1.22
PDLIM3-212ENST00000620787 MEGF6O75095 1541 aa22.69■■□□□ 1.22
PDLIM3-212ENST00000620787 IKBKBO14920 756 aa22.69■■□□□ 1.22
PDLIM3-212ENST00000620787 FOXP2O15409 715 aa22.69■■□□□ 1.22
PDLIM3-212ENST00000620787 TTC5Q8N0Z6 440 aa22.69■■□□□ 1.22
PDLIM3-212ENST00000620787 GJB4Q9NTQ9 266 aa22.69■■□□□ 1.22
PDLIM3-212ENST00000620787 ORC3Q9UBD5 711 aaPredicted RBP22.69■■□□□ 1.22
PDLIM3-212ENST00000620787 CMA1P23946 247 aa22.69■■□□□ 1.22
PDLIM3-212ENST00000620787 IL15P40933 162 aaPredicted RBP22.69■■□□□ 1.22
PDLIM3-212ENST00000620787 NRDCO43847 1150 aa22.68■■□□□ 1.22
PDLIM3-212ENST00000620787 LMOD1P29536 600 aaPredicted RBP22.68■■□□□ 1.22
PDLIM3-212ENST00000620787 CLCN6P51797 869 aa22.68■■□□□ 1.22
PDLIM3-212ENST00000620787 BMS1Q14692 1282 aaKnown RBP22.68■■□□□ 1.22
PDLIM3-212ENST00000620787 ANO1Q5XXA6 986 aa22.68■■□□□ 1.22
PDLIM3-212ENST00000620787 FHOD1Q9Y613 1164 aa22.68■■□□□ 1.22
PDLIM3-212ENST00000620787 KLF18A0A0U1RQI7 1052 aa22.68■■□□□ 1.22
PDLIM3-212ENST00000620787 LRRC24Q50LG9 513 aa22.68■■□□□ 1.22
PDLIM3-212ENST00000620787 MB21D2Q8IYB1 491 aaPredicted RBP22.68■■□□□ 1.22
PDLIM3-212ENST00000620787 PHLPP2Q6ZVD8 1323 aa22.67■■□□□ 1.22
PDLIM3-212ENST00000620787 GOLGA8BA8MQT2 603 aa22.67■■□□□ 1.22
PDLIM3-212ENST00000620787 ATP1A3P13637 1013 aa22.67■■□□□ 1.22
PDLIM3-212ENST00000620787 HAND2P61296 217 aa22.67■■□□□ 1.22
PDLIM3-212ENST00000620787 ETF1P62495 437 aaKnown RBP22.67■■□□□ 1.22
PDLIM3-212ENST00000620787 KIF23Q02241 960 aaPredicted RBP22.67■■□□□ 1.22
PDLIM3-212ENST00000620787 PRC1O43663 620 aa22.67■■□□□ 1.22
PDLIM3-212ENST00000620787 DHX16O60231 1041 aaKnown RBP22.67■■□□□ 1.22
PDLIM3-212ENST00000620787 WDHD1O75717 1129 aaPredicted RBP22.67■■□□□ 1.22
PDLIM3-212ENST00000620787 SYNE3Q6ZMZ3 975 aa22.67■■□□□ 1.22
PDLIM3-212ENST00000620787 A0A1B0GUL7 405 aa22.66■■□□□ 1.22
PDLIM3-212ENST00000620787 TATP17735 454 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms