RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 COA1Q9GZY4 146 aa16.59■□□□□ 0.25
MUC1-229ENST00000620770 CD209Q9NNX6 404 aa16.59■□□□□ 0.25
MUC1-229ENST00000620770 GPR108Q9NPR9 543 aa16.59■□□□□ 0.25
MUC1-229ENST00000620770 KCNQ5Q9NR82 932 aa16.59■□□□□ 0.25
MUC1-229ENST00000620770 JAG2Q9Y219 1238 aa16.59■□□□□ 0.25
MUC1-229ENST00000620770 IFIT2P09913 472 aaKnown RBP16.58■□□□□ 0.24
MUC1-229ENST00000620770 LMOD1P29536 600 aaPredicted RBP16.58■□□□□ 0.24
MUC1-229ENST00000620770 PNMA8AQ86V59 439 aaPredicted RBP16.58■□□□□ 0.24
MUC1-229ENST00000620770 CCDC136Q96JN2 1154 aa16.58■□□□□ 0.24
MUC1-229ENST00000620770 DBNLQ9UJU6 430 aaKnown RBP16.58■□□□□ 0.24
MUC1-229ENST00000620770 GJA3Q9Y6H8 435 aa16.58■□□□□ 0.24
MUC1-229ENST00000620770 CHAF1AQ13111 956 aaPredicted RBP16.57■□□□□ 0.24
MUC1-229ENST00000620770 FBXO33Q7Z6M2 555 aa16.57■□□□□ 0.24
MUC1-229ENST00000620770 SMC5Q8IY18 1101 aa16.57■□□□□ 0.24
MUC1-229ENST00000620770 CXCL9Q07325 125 aa16.56■□□□□ 0.24
MUC1-229ENST00000620770 TTC39AQ5SRH9 613 aa16.56■□□□□ 0.24
MUC1-229ENST00000620770 CCDC102BQ68D86 513 aa16.56■□□□□ 0.24
MUC1-229ENST00000620770 CIAPIN1Q6FI81 312 aa16.56■□□□□ 0.24
MUC1-229ENST00000620770 PODNQ7Z5L7 613 aa16.56■□□□□ 0.24
MUC1-229ENST00000620770 CREBZFQ9NS37 354 aa16.56■□□□□ 0.24
MUC1-229ENST00000620770 GNL3LQ9NVN8 582 aaKnown RBP16.56■□□□□ 0.24
MUC1-229ENST00000620770 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
MUC1-229ENST00000620770 PSMD14O00487 310 aa16.55■□□□□ 0.24
MUC1-229ENST00000620770 IL1R1P14778 569 aa16.55■□□□□ 0.24
MUC1-229ENST00000620770 GTF2IP78347 998 aa16.55■□□□□ 0.24
MUC1-229ENST00000620770 LNPKQ9C0E8 428 aa16.55■□□□□ 0.24
MUC1-229ENST00000620770 USP17L3A6NCW0 530 aa16.54■□□□□ 0.24
MUC1-229ENST00000620770 USP17L4A6NCW7 530 aa16.54■□□□□ 0.24
MUC1-229ENST00000620770 CCDC158Q5M9N0 1113 aa16.54■□□□□ 0.24
MUC1-229ENST00000620770 USP17L1Q7RTZ2 530 aa16.54■□□□□ 0.24
MUC1-229ENST00000620770 TDRD7Q8NHU6 1098 aaKnown RBP16.54■□□□□ 0.24
MUC1-229ENST00000620770 MXD3Q9BW11 206 aa16.54■□□□□ 0.24
MUC1-229ENST00000620770 SCN9AQ15858 1988 aa16.54■□□□□ 0.24
MUC1-229ENST00000620770 COL1A1P02452 1464 aaPredicted RBP16.54■□□□□ 0.24
MUC1-229ENST00000620770 PASKQ96RG2 1323 aa16.53■□□□□ 0.24
MUC1-229ENST00000620770 TRPM7Q96QT4 1865 aa16.53■□□□□ 0.24
MUC1-229ENST00000620770 SCNN1DP51172 638 aa16.53■□□□□ 0.24
MUC1-229ENST00000620770 TNIP1Q15025 636 aa16.53■□□□□ 0.24
MUC1-229ENST00000620770 ERICH6BQ5W0A0 696 aa16.53■□□□□ 0.24
MUC1-229ENST00000620770 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
MUC1-229ENST00000620770 OTUD7AQ8TE49 926 aaPredicted RBP16.53■□□□□ 0.24
MUC1-229ENST00000620770 PPP4R2Q9NY27 417 aa16.53■□□□□ 0.24
MUC1-229ENST00000620770 UQCRFS1P1P0C7P4 283 aa16.52■□□□□ 0.24
MUC1-229ENST00000620770 NUCB1Q02818 461 aa16.52■□□□□ 0.24
MUC1-229ENST00000620770 RASGRF1Q13972 1273 aa16.52■□□□□ 0.24
MUC1-229ENST00000620770 SCARF1Q14162 830 aa16.52■□□□□ 0.24
MUC1-229ENST00000620770 IFFO2Q5TF58 517 aa16.52■□□□□ 0.24
MUC1-229ENST00000620770 TSHZ3Q63HK5 1081 aa16.52■□□□□ 0.24
MUC1-229ENST00000620770 PI16Q6UXB8 463 aa16.52■□□□□ 0.24
MUC1-229ENST00000620770 CHD1LQ86WJ1 897 aa16.52■□□□□ 0.24
MUC1-229ENST00000620770 SNRKQ9NRH2 765 aa16.52■□□□□ 0.24
MUC1-229ENST00000620770 ZBTB12Q9Y330 459 aaPredicted RBP16.52■□□□□ 0.24
MUC1-229ENST00000620770 ARID4AP29374 1257 aaPredicted RBP16.51■□□□□ 0.23
MUC1-229ENST00000620770 GMPSP49915 693 aaPredicted RBP16.51■□□□□ 0.23
MUC1-229ENST00000620770 DACT2Q5SW24 774 aa16.51■□□□□ 0.23
MUC1-229ENST00000620770 STRIP1Q5VSL9 837 aa16.51■□□□□ 0.23
MUC1-229ENST00000620770 CENPQQ7L2Z9 268 aaPredicted RBP16.51■□□□□ 0.23
MUC1-229ENST00000620770 GPATCH3Q96I76 525 aa16.51■□□□□ 0.23
MUC1-229ENST00000620770 DENND2AQ9ULE3 1009 aa16.51■□□□□ 0.23
MUC1-229ENST00000620770 TMEM88BA6NKF7 163 aa16.5■□□□□ 0.23
MUC1-229ENST00000620770 MCAMP43121 646 aa16.5■□□□□ 0.23
MUC1-229ENST00000620770 MAP1SQ66K74 1059 aaPredicted RBP16.5■□□□□ 0.23
MUC1-229ENST00000620770 RSBN1LQ6PCB5 846 aaPredicted RBP16.5■□□□□ 0.23
MUC1-229ENST00000620770 HMG20BQ9P0W2 317 aa16.5■□□□□ 0.23
MUC1-229ENST00000620770 NDUFB9Q9Y6M9 179 aa16.5■□□□□ 0.23
MUC1-229ENST00000620770 PCNTO95613 3336 aa16.5■□□□□ 0.23
MUC1-229ENST00000620770 FAM205AQ6ZU69 1335 aa16.49■□□□□ 0.23
MUC1-229ENST00000620770 MYH13Q9UKX3 1938 aa16.49■□□□□ 0.23
MUC1-229ENST00000620770 F8W031 263 aaPredicted RBP16.49■□□□□ 0.23
MUC1-229ENST00000620770 SEMA3EO15041 775 aa16.49■□□□□ 0.23
MUC1-229ENST00000620770 ITGBL1O95965 494 aaPredicted RBP16.49■□□□□ 0.23
MUC1-229ENST00000620770 VIL1P09327 827 aaKnown RBP16.49■□□□□ 0.23
MUC1-229ENST00000620770 EPS15P42566 896 aa16.49■□□□□ 0.23
MUC1-229ENST00000620770 MFSD14BQ5SR56 506 aa16.49■□□□□ 0.23
MUC1-229ENST00000620770 USP50Q70EL3 339 aaPredicted RBP16.49■□□□□ 0.23
MUC1-229ENST00000620770 CNTROBQ8N137 903 aa16.49■□□□□ 0.23
MUC1-229ENST00000620770 CERS5Q8N5B7 392 aa16.49■□□□□ 0.23
MUC1-229ENST00000620770 SPATA5Q8NB90 893 aa16.49■□□□□ 0.23
MUC1-229ENST00000620770 MKRN1Q9UHC7 482 aaKnown RBP16.49■□□□□ 0.23
MUC1-229ENST00000620770 CNTNAP1P78357 1384 aa16.49■□□□□ 0.23
MUC1-229ENST00000620770 SHTN1A0MZ66 631 aa16.48■□□□□ 0.23
MUC1-229ENST00000620770 MX1P20591 662 aa16.48■□□□□ 0.23
MUC1-229ENST00000620770 KIAA0825Q8IV33 1275 aa16.48■□□□□ 0.23
MUC1-229ENST00000620770 DNAJC2Q99543 621 aaKnown RBP16.48■□□□□ 0.23
MUC1-229ENST00000620770 ADARB2Q9NS39 739 aaKnown RBP16.48■□□□□ 0.23
MUC1-229ENST00000620770 ECHDC1Q9NTX5 307 aa16.48■□□□□ 0.23
MUC1-229ENST00000620770 GPRC5DQ9NZD1 345 aa16.48■□□□□ 0.23
MUC1-229ENST00000620770 ZNF646O15015 1829 aaPredicted RBP16.47■□□□□ 0.23
MUC1-229ENST00000620770 PSME4Q14997 1843 aa16.47■□□□□ 0.23
MUC1-229ENST00000620770 HSPA1AP0DMV8 641 aaKnown RBP16.47■□□□□ 0.23
MUC1-229ENST00000620770 HSPA1BP0DMV9 641 aaKnown RBP16.47■□□□□ 0.23
MUC1-229ENST00000620770 ZAP70P43403 619 aa16.47■□□□□ 0.23
MUC1-229ENST00000620770 WDR66Q8TBY9 1149 aa16.47■□□□□ 0.23
MUC1-229ENST00000620770 BOLA2Q9H3K6 86 aa16.47■□□□□ 0.23
MUC1-229ENST00000620770 ABCF2Q9UG63 623 aa16.47■□□□□ 0.23
MUC1-229ENST00000620770 MYO3BQ8WXR4 1341 aa16.46■□□□□ 0.23
MUC1-229ENST00000620770 GRIK5Q16478 980 aa16.46■□□□□ 0.23
MUC1-229ENST00000620770 TBC1D9Q6ZT07 1266 aa16.46■□□□□ 0.23
MUC1-229ENST00000620770 MICALL2Q8IY33 904 aa16.46■□□□□ 0.23
MUC1-229ENST00000620770 AGBL3Q8NEM8 1001 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms