RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 SSRP1Q08945 709 aaKnown RBP10.7□□□□□ -0.7
RBFOX1-223ENST00000620507 ATL3Q6DD88 541 aa10.7□□□□□ -0.7
RBFOX1-223ENST00000620507 CCDC186Q7Z3E2 898 aa10.7□□□□□ -0.7
RBFOX1-223ENST00000620507 OVOS2A0A0G2JMS6 1433 aa10.7□□□□□ -0.7
RBFOX1-223ENST00000620507 TOB2Q14106 344 aaPredicted RBP10.7□□□□□ -0.7
RBFOX1-223ENST00000620507 GIGYF2Q6Y7W6 1299 aaKnown RBP10.7□□□□□ -0.7
RBFOX1-223ENST00000620507 CLSTN2Q9H4D0 955 aa10.7□□□□□ -0.7
RBFOX1-223ENST00000620507 SH3TC1Q8TE82 1336 aa10.7□□□□□ -0.7
RBFOX1-223ENST00000620507 PIP4K2BP78356 416 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 ZNF274Q96GC6 653 aaPredicted RBP10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 SLC26A6Q9BXS9 759 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 MAST3O60307 1309 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 MAP3K15Q6ZN16 1313 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 SMTNL1A8MU46 457 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 SPTLC2O15270 562 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 FGAP02671 866 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 RXRAP19793 462 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 PUM3Q15397 648 aaKnown RBP10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 SLFNL1Q499Z3 407 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 OTUD7BQ6GQQ9 843 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 MAGEB6Q8N7X4 407 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 RGPD8O14715 1765 aaPredicted RBP10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 CTSWP56202 376 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 MTMR7Q9Y216 660 aa10.69□□□□□ -0.7
RBFOX1-223ENST00000620507 FOXO4P98177 505 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 GREM2Q9H772 168 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 SLC4A4Q9Y6R1 1079 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 ELP1O95163 1332 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 RANBP6O60518 1105 aaKnown RBP10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 NR1I2O75469 434 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 PIGBQ92521 554 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 KRT23Q9C075 422 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 CNNM2Q9H8M5 875 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 ANGEL1Q9UNK9 670 aaKnown RBP10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 RPAP1Q9BWH6 1393 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 B4E1Z4 1266 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 MARCKSP29966 332 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 FAM160A1Q05DH4 1040 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 BRAPQ7Z569 592 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 LPIN2Q92539 896 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 OSBP2Q969R2 916 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 ZNF500O60304 480 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 PDIA3P30101 505 aaKnown RBP10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 RFX5P48382 616 aaPredicted RBP10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 CBX8Q9HC52 389 aa10.68□□□□□ -0.7
RBFOX1-223ENST00000620507 A0A1B0GVL5 298 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 MBD4O95243 580 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 CHGBP05060 677 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 CYP7A1P22680 504 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 WTAPQ15007 396 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 TSGA10IPQ3SY00 556 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 IQCA1Q86XH1 822 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 PDILTQ8N807 584 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 CCDC112Q8NEF3 446 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 C16orf45Q96MC5 204 aaPredicted RBP10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 ZBTB1Q9Y2K1 713 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 ZNF532Q9HCE3 1301 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 PES1O00541 588 aaKnown RBP10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 PTGS1P23219 599 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 SYKP43405 635 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 ISM2Q6H9L7 571 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 PI16Q6UXB8 463 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 NSUN7Q8NE18 718 aaKnown RBP10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 USP28Q96RU2 1077 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 M0R2C6 588 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 ATG9AQ7Z3C6 839 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 ANKRD18AQ8IVF6 992 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 MIGA1Q8NAN2 632 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 CNNM3Q8NE01 707 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 PDLIM2Q96JY6 352 aa10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 TMX4Q9H1E5 349 aaPredicted RBP10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 ZNF335Q9H4Z2 1342 aaPredicted RBP10.67□□□□□ -0.7
RBFOX1-223ENST00000620507 G3V3G9 751 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 KDM6AO15550 1401 aaPredicted RBP10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 MEGF6O75095 1541 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 TPM1P09493 284 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 DCAF8Q5TAQ9 597 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 PRIMPOLQ96LW4 560 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 TAF6LQ9Y6J9 622 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 TOPAZ1Q8N9V7 1692 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 ZPR1O75312 459 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 PDE8BO95263 885 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 CFAP100Q494V2 611 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 CCDC102BQ68D86 513 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 NLRP10Q86W26 655 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 CEP131Q9UPN4 1083 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 MED23Q9ULK4 1368 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 DHX8Q14562 1220 aaKnown RBP10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 TMTC2Q8N394 836 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 AOPEPQ8N6M6 819 aa10.66□□□□□ -0.7
RBFOX1-223ENST00000620507 FMN2Q9NZ56 1722 aa10.65□□□□□ -0.7
RBFOX1-223ENST00000620507 DYNC1I1O14576 645 aa10.65□□□□□ -0.7
RBFOX1-223ENST00000620507 GNAT2P19087 354 aa10.65□□□□□ -0.7
RBFOX1-223ENST00000620507 SFPQP23246 707 aaKnown RBP eCLIP10.65□□□□□ -0.7
RBFOX1-223ENST00000620507 RTN1Q16799 776 aa10.65□□□□□ -0.7
RBFOX1-223ENST00000620507 PIBF1Q8WXW3 757 aa10.65□□□□□ -0.7
RBFOX1-223ENST00000620507 TMEM87BQ96K49 555 aa10.65□□□□□ -0.7
RBFOX1-223ENST00000620507 CCDC87Q9NVE4 849 aa10.65□□□□□ -0.7
RBFOX1-223ENST00000620507 RFX7Q2KHR2 1363 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms