RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 ZSCAN12O43309 604 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 CBFA2T2O43439 604 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 CHGBP05060 677 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 PSME1Q06323 249 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 RIC3Q7Z5B4 369 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 LINC00301Q8NCQ3 95 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 ABCC6O95255 1503 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 IKBKBO14920 756 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 SPTLC2O15270 562 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 SERPINC1P01008 464 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 OAS2P29728 719 aaKnown RBP10.05□□□□□ -0.8
C9orf72-206ENST00000619707 NEXNQ0ZGT2 675 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 GNL2Q13823 731 aaKnown RBP10.05□□□□□ -0.8
C9orf72-206ENST00000619707 NCAPHQ15003 741 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 TNNI3KQ59H18 835 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 TRIM65Q6PJ69 517 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 DDX46Q7L014 1031 aaKnown RBP10.05□□□□□ -0.8
C9orf72-206ENST00000619707 UTP14AQ9BVJ6 771 aaKnown RBP10.05□□□□□ -0.8
C9orf72-206ENST00000619707 AMOTL2Q9Y2J4 779 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 CLIC4Q9Y696 253 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 FPGT-TNNI3KV9GXZ4 949 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 PLEKHG1Q9ULL1 1385 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 MRC1P22897 1456 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 ZNF202O95125 648 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 YEATS4O95619 227 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 PDIA3P30101 505 aaKnown RBP10.05□□□□□ -0.8
C9orf72-206ENST00000619707 UBASH3AP57075 661 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 NBPF6Q5VWK0 638 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 NBPF4Q96M43 638 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 TRIM34Q9BYJ4 488 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 PARP3Q9Y6F1 533 aa10.05□□□□□ -0.8
C9orf72-206ENST00000619707 RGPD8O14715 1765 aaPredicted RBP10.05□□□□□ -0.8
C9orf72-206ENST00000619707 POLR3DP05423 398 aaPredicted RBP10.04□□□□□ -0.8
C9orf72-206ENST00000619707 TFCP2Q12800 502 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 CFAP100Q494V2 611 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 PLEKHO1Q53GL0 409 aaPredicted RBP10.04□□□□□ -0.8
C9orf72-206ENST00000619707 MUM1L1Q5H9M0 696 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 C1orf141Q5JVX7 400 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 KRBA2Q6ZNG9 492 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 FAM177A1Q8N128 213 aaPredicted RBP10.04□□□□□ -0.8
C9orf72-206ENST00000619707 SMARCE1Q969G3 411 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 ZNF274Q96GC6 653 aaPredicted RBP10.04□□□□□ -0.8
C9orf72-206ENST00000619707 FEZ2Q9UHY8 353 aaPredicted RBP10.04□□□□□ -0.8
C9orf72-206ENST00000619707 ATP1A3P13637 1013 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 ST5P78524 1137 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 EXOSC10Q01780 885 aaKnown RBP10.04□□□□□ -0.8
C9orf72-206ENST00000619707 SMC1AQ14683 1233 aaKnown RBP10.04□□□□□ -0.8
C9orf72-206ENST00000619707 DIP2AQ14689 1571 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 ISM2Q6H9L7 571 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 CC2D1AQ6P1N0 951 aaPredicted RBP10.04□□□□□ -0.8
C9orf72-206ENST00000619707 SYNE3Q6ZMZ3 975 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 FCHSD1Q86WN1 690 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 MPHOSPH8Q99549 860 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 HAUS7Q99871 368 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 AGXT2Q9BYV1 514 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 POLR3EQ9NVU0 708 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 SH3TC1Q8TE82 1336 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 PRAMEF22A3QJZ6 481 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 TBC1D8O95759 1140 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 TOP1P11387 765 aaKnown RBP10.04□□□□□ -0.8
C9orf72-206ENST00000619707 LTKP29376 864 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 CASQ1P31415 396 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 REXO1L1PQ8IX06 675 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 GPR161Q8N6U8 529 aaKnown RBP10.04□□□□□ -0.8
C9orf72-206ENST00000619707 CCDC34Q96HJ3 373 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 C8orf76Q96K31 380 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 ARFGAP3Q9NP61 516 aa10.04□□□□□ -0.8
C9orf72-206ENST00000619707 DDX21Q9NR30 783 aaKnown RBP eCLIP10.04□□□□□ -0.8
C9orf72-206ENST00000619707 NEDD4P46934 1319 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 E7EWF7 191 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 RNMTO43148 476 aaKnown RBP10.03□□□□□ -0.8
C9orf72-206ENST00000619707 MYCNP04198 464 aaPredicted RBP10.03□□□□□ -0.8
C9orf72-206ENST00000619707 IGKV5-2P06315 115 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 OTUD7BQ6GQQ9 843 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 CHST3Q7LGC8 479 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 KBTBD3Q8NAB2 608 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 IP6K1Q92551 441 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 AK7Q96M32 723 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 DBNDD2Q9BQY9 259 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 UBXN6Q9BZV1 441 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 COPRSQ9NQ92 184 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 ANKARQ7Z5J8 1434 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 UBR1Q8IWV7 1749 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 PFKFB1P16118 471 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 MYL5Q02045 173 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 DSCC1Q9BVC3 393 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 ZCCHC17Q9NP64 241 aaKnown RBP10.03□□□□□ -0.8
C9orf72-206ENST00000619707 CWC15Q9P013 229 aaKnown RBP10.03□□□□□ -0.8
C9orf72-206ENST00000619707 LAMA4Q16363 1823 aa10.03□□□□□ -0.8
C9orf72-206ENST00000619707 GOLGA6L9A6NEM1 432 aa10.02□□□□□ -0.8
C9orf72-206ENST00000619707 ARHGAP6O43182 974 aa10.02□□□□□ -0.8
C9orf72-206ENST00000619707 SASH3O75995 380 aa10.02□□□□□ -0.8
C9orf72-206ENST00000619707 FDPSP14324 419 aaKnown RBP10.02□□□□□ -0.8
C9orf72-206ENST00000619707 TRHP20396 242 aaPredicted RBP10.02□□□□□ -0.8
C9orf72-206ENST00000619707 GNG11P61952 73 aa10.02□□□□□ -0.8
C9orf72-206ENST00000619707 ZSCAN26Q16670 478 aa10.02□□□□□ -0.8
C9orf72-206ENST00000619707 EPHA10Q5JZY3 1008 aa10.02□□□□□ -0.8
C9orf72-206ENST00000619707 BRAPQ7Z569 592 aa10.02□□□□□ -0.8
C9orf72-206ENST00000619707 EPC1Q9H2F5 836 aa10.02□□□□□ -0.8
C9orf72-206ENST00000619707 TMX1Q9H3N1 280 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms