RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 FOXP2O15409 715 aa23.96■■□□□ 1.43
MMP28-207ENST00000619655 PTMSP20962 102 aa23.96■■□□□ 1.43
MMP28-207ENST00000619655 SLC10A5Q5PT55 438 aa23.96■■□□□ 1.43
MMP28-207ENST00000619655 E7EWF7 191 aa23.96■■□□□ 1.43
MMP28-207ENST00000619655 BSDC1Q9NW68 430 aaPredicted RBP23.96■■□□□ 1.43
MMP28-207ENST00000619655 LAMA4Q16363 1823 aa23.96■■□□□ 1.43
MMP28-207ENST00000619655 COL24A1Q17RW2 1714 aa23.96■■□□□ 1.43
MMP28-207ENST00000619655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.95■■□□□ 1.43
MMP28-207ENST00000619655 PDE6AP16499 860 aa23.95■■□□□ 1.43
MMP28-207ENST00000619655 FGAP02671 866 aa23.95■■□□□ 1.42
MMP28-207ENST00000619655 MINPP1Q9UNW1 487 aa23.95■■□□□ 1.42
MMP28-207ENST00000619655 WDR33Q9C0J8 1336 aaKnown RBP23.95■■□□□ 1.42
MMP28-207ENST00000619655 GYG1P46976 350 aa23.94■■□□□ 1.42
MMP28-207ENST00000619655 DDX49Q9Y6V7 483 aaKnown RBP23.94■■□□□ 1.42
MMP28-207ENST00000619655 PRPF40AO75400 957 aaKnown RBP23.94■■□□□ 1.42
MMP28-207ENST00000619655 SYT1P21579 422 aa23.94■■□□□ 1.42
MMP28-207ENST00000619655 SKOR2Q2VWA4 1001 aaPredicted RBP23.94■■□□□ 1.42
MMP28-207ENST00000619655 CHST3Q7LGC8 479 aa23.94■■□□□ 1.42
MMP28-207ENST00000619655 MAGEB6Q8N7X4 407 aa23.94■■□□□ 1.42
MMP28-207ENST00000619655 BRF1Q92994 677 aa23.94■■□□□ 1.42
MMP28-207ENST00000619655 ALDH8A1Q9H2A2 487 aaPredicted RBP23.94■■□□□ 1.42
MMP28-207ENST00000619655 APPP05067 770 aa23.93■■□□□ 1.42
MMP28-207ENST00000619655 IMMTQ16891 758 aaKnown RBP23.93■■□□□ 1.42
MMP28-207ENST00000619655 CTNNA3Q9UI47 895 aa23.93■■□□□ 1.42
MMP28-207ENST00000619655 STX6O43752 255 aa23.93■■□□□ 1.42
MMP28-207ENST00000619655 HMGB1P09429 215 aaKnown RBP23.93■■□□□ 1.42
MMP28-207ENST00000619655 NFIXQ14938 502 aa23.93■■□□□ 1.42
MMP28-207ENST00000619655 UBE3CQ15386 1083 aa23.93■■□□□ 1.42
MMP28-207ENST00000619655 RPS8P62241 208 aaKnown RBP23.92■■□□□ 1.42
MMP28-207ENST00000619655 MAP3K12Q12852 859 aa23.92■■□□□ 1.42
MMP28-207ENST00000619655 DHX32Q7L7V1 743 aaKnown RBP23.92■■□□□ 1.42
MMP28-207ENST00000619655 NCLP19338 710 aaKnown RBP23.92■■□□□ 1.42
MMP28-207ENST00000619655 AIDAQ96BJ3 306 aa23.92■■□□□ 1.42
MMP28-207ENST00000619655 LMBRD1Q9NUN5 540 aa23.92■■□□□ 1.42
MMP28-207ENST00000619655 VPS37DQ86XT2 251 aa23.91■■□□□ 1.42
MMP28-207ENST00000619655 A0A1B0GUL6 1792 aa23.91■■□□□ 1.42
MMP28-207ENST00000619655 CARMIL3Q8ND23 1372 aa23.9■■□□□ 1.42
MMP28-207ENST00000619655 TCRBV5S4A2TA0A5A2 114 aa23.9■■□□□ 1.42
MMP28-207ENST00000619655 NAP1L2Q9ULW6 460 aaPredicted RBP23.9■■□□□ 1.42
MMP28-207ENST00000619655 CNBD1Q8NA66 436 aa23.89■■□□□ 1.42
MMP28-207ENST00000619655 LRP2BPQ9P2M1 347 aa23.89■■□□□ 1.42
MMP28-207ENST00000619655 ZNF213O14771 459 aa23.89■■□□□ 1.41
MMP28-207ENST00000619655 ZSCAN22P10073 491 aaPredicted RBP23.89■■□□□ 1.41
MMP28-207ENST00000619655 UBE4AQ14139 1066 aa23.89■■□□□ 1.41
MMP28-207ENST00000619655 ABCF2Q9UG63 623 aa23.89■■□□□ 1.41
MMP28-207ENST00000619655 VPS37CA5D8V6 355 aaPredicted RBP23.88■■□□□ 1.41
MMP28-207ENST00000619655 CAVIN4Q5BKX8 364 aa23.88■■□□□ 1.41
MMP28-207ENST00000619655 TNRC6CQ9HCJ0 1690 aaKnown RBP23.88■■□□□ 1.41
MMP28-207ENST00000619655 APOBRQ0VD83 1088 aa23.88■■□□□ 1.41
MMP28-207ENST00000619655 UBR3Q6ZT12 1888 aa23.87■■□□□ 1.41
MMP28-207ENST00000619655 DOCK2Q92608 1830 aa23.87■■□□□ 1.41
MMP28-207ENST00000619655 KLRK1P26718 216 aa23.87■■□□□ 1.41
MMP28-207ENST00000619655 GDPD2Q9HCC8 539 aa23.87■■□□□ 1.41
MMP28-207ENST00000619655 GNL3LQ9NVN8 582 aaKnown RBP23.87■■□□□ 1.41
MMP28-207ENST00000619655 MBD4O95243 580 aa23.87■■□□□ 1.41
MMP28-207ENST00000619655 ADRA2BP18089 450 aa23.87■■□□□ 1.41
MMP28-207ENST00000619655 EXOSC10Q01780 885 aaKnown RBP23.87■■□□□ 1.41
MMP28-207ENST00000619655 SLC27A3Q5K4L6 730 aa23.87■■□□□ 1.41
MMP28-207ENST00000619655 KLHL40Q2TBA0 621 aa23.86■■□□□ 1.41
MMP28-207ENST00000619655 GTF3C6Q969F1 213 aa23.86■■□□□ 1.41
MMP28-207ENST00000619655 ARMT1Q9H993 441 aa23.86■■□□□ 1.41
MMP28-207ENST00000619655 LARP1BQ659C4 914 aaKnown RBP23.85■■□□□ 1.41
MMP28-207ENST00000619655 STRBPQ96SI9 672 aaKnown RBP23.85■■□□□ 1.41
MMP28-207ENST00000619655 GYS1P13807 737 aa23.85■■□□□ 1.41
MMP28-207ENST00000619655 TM4SF1P30408 202 aa23.85■■□□□ 1.41
MMP28-207ENST00000619655 SLC51AQ86UW1 340 aa23.85■■□□□ 1.41
MMP28-207ENST00000619655 ZNF804BA4D1E1 1349 aa23.85■■□□□ 1.41
MMP28-207ENST00000619655 F13A1P00488 732 aa23.84■■□□□ 1.41
MMP28-207ENST00000619655 MIGA1Q8NAN2 632 aa23.84■■□□□ 1.41
MMP28-207ENST00000619655 FAM84BQ96KN1 310 aaPredicted RBP23.84■■□□□ 1.41
MMP28-207ENST00000619655 TFCP2L1Q9NZI6 479 aa23.84■■□□□ 1.41
MMP28-207ENST00000619655 JAK2O60674 1132 aa23.84■■□□□ 1.41
MMP28-207ENST00000619655 SCRN1Q12765 414 aa23.84■■□□□ 1.41
MMP28-207ENST00000619655 RALYLQ86SE5 291 aaKnown RBP23.84■■□□□ 1.41
MMP28-207ENST00000619655 RAI14Q9P0K7 980 aa23.84■■□□□ 1.41
MMP28-207ENST00000619655 MTMR6Q9Y217 621 aa23.84■■□□□ 1.41
MMP28-207ENST00000619655 TXNRD1Q16881 649 aa23.83■■□□□ 1.41
MMP28-207ENST00000619655 GPHNQ9NQX3 736 aaPredicted RBP23.83■■□□□ 1.41
MMP28-207ENST00000619655 TCHHQ07283 1943 aa23.83■■□□□ 1.41
MMP28-207ENST00000619655 COL1A1P02452 1464 aaPredicted RBP23.83■■□□□ 1.41
MMP28-207ENST00000619655 CCT2P78371 535 aaKnown RBP23.83■■□□□ 1.4
MMP28-207ENST00000619655 PRR5LQ6MZQ0 368 aa23.83■■□□□ 1.4
MMP28-207ENST00000619655 CAVIN1Q6NZI2 390 aaKnown RBP23.83■■□□□ 1.4
MMP28-207ENST00000619655 GOLGA6L3A6NEY3 463 aa23.82■■□□□ 1.4
MMP28-207ENST00000619655 TPRNQ4KMQ1 711 aa23.82■■□□□ 1.4
MMP28-207ENST00000619655 NCOA7Q8NI08 942 aa23.82■■□□□ 1.4
MMP28-207ENST00000619655 GPT2Q8TD30 523 aa23.82■■□□□ 1.4
MMP28-207ENST00000619655 DDX11Q96FC9 970 aa23.82■■□□□ 1.4
MMP28-207ENST00000619655 RBM6P78332 1123 aaKnown RBP23.82■■□□□ 1.4
MMP28-207ENST00000619655 PROM2Q8N271 834 aa23.82■■□□□ 1.4
MMP28-207ENST00000619655 LCORLQ8N3X6 602 aa23.82■■□□□ 1.4
MMP28-207ENST00000619655 ANKRD2Q9GZV1 360 aa23.82■■□□□ 1.4
MMP28-207ENST00000619655 DENND2AQ9ULE3 1009 aa23.82■■□□□ 1.4
MMP28-207ENST00000619655 PRKAB2O43741 272 aa23.81■■□□□ 1.4
MMP28-207ENST00000619655 NBPF3Q9H094 633 aa23.81■■□□□ 1.4
MMP28-207ENST00000619655 CNPY2Q9Y2B0 182 aa23.81■■□□□ 1.4
MMP28-207ENST00000619655 PRC1O43663 620 aa23.81■■□□□ 1.4
MMP28-207ENST00000619655 PPFIA3O75145 1194 aa23.81■■□□□ 1.4
MMP28-207ENST00000619655 CYP7A1P22680 504 aa23.81■■□□□ 1.4
MMP28-207ENST00000619655 MCM5P33992 734 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms