RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 PDE6AP16499 860 aa15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 COL9A3Q14050 684 aaPredicted RBP15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 CRY2Q49AN0 593 aa15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 GNL3LQ9NVN8 582 aaKnown RBP15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 ZNF532Q9HCE3 1301 aa15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 MYH7P12883 1935 aa15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 QSER1Q2KHR3 1735 aa15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 FOXD4L5Q5VV16 416 aaPredicted RBP15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 BLOC1S2Q6QNY1 142 aa15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 FOXD4L4Q8WXT5 416 aaPredicted RBP15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 TCEANC2Q96MN5 208 aa15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 RPAP1Q9BWH6 1393 aaPredicted RBP15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 ANKIB1Q9P2G1 1089 aa15.15■□□□□ 0.02
TNFAIP3-209ENST00000619035 MYO5AQ9Y4I1 1855 aaKnown RBP15.14■□□□□ 0.02
TNFAIP3-209ENST00000619035 GPAA1O43292 621 aa15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 MAP3K12Q12852 859 aa15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 MSL1Q68DK7 614 aa15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 CHAMP1Q96JM3 812 aa15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 CAMKK2Q96RR4 588 aa15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 NRXN2Q9P2S2 1712 aa15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 KLRG2A4D1S0 409 aaPredicted RBP15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 EN1Q05925 392 aaPredicted RBP15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 KRT32Q14532 448 aa15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 MAGEB6Q8N7X4 407 aa15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 FAM84BQ96KN1 310 aaPredicted RBP15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 LRP2BPQ9P2M1 347 aa15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 ABCF2Q9UG63 623 aa15.14■□□□□ 0.01
TNFAIP3-209ENST00000619035 ZNF804BA4D1E1 1349 aa15.13■□□□□ 0.01
TNFAIP3-209ENST00000619035 A0A0G2JLW4 131 aa15.13■□□□□ 0.01
TNFAIP3-209ENST00000619035 DTNBO60941 627 aa15.13■□□□□ 0.01
TNFAIP3-209ENST00000619035 EZH2Q15910 746 aaKnown RBP15.13■□□□□ 0.01
TNFAIP3-209ENST00000619035 PNPLA7Q6ZV29 1317 aa15.13■□□□□ 0.01
TNFAIP3-209ENST00000619035 UBE3CQ15386 1083 aa15.13■□□□□ 0.01
TNFAIP3-209ENST00000619035 TTLL5Q6EMB2 1281 aa15.13■□□□□ 0.01
TNFAIP3-209ENST00000619035 RBM17Q96I25 401 aaKnown RBP15.13■□□□□ 0.01
TNFAIP3-209ENST00000619035 GBP4Q96PP9 640 aa15.13■□□□□ 0.01
TNFAIP3-209ENST00000619035 LIMCH1Q9UPQ0 1083 aa15.13■□□□□ 0.01
TNFAIP3-209ENST00000619035 DDX11L8A8MPP1 907 aa15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 RPS6KB1P23443 525 aa15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 HOXA10P31260 410 aaPredicted RBP15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 TSGA10IPQ3SY00 556 aa15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 AIDAQ96BJ3 306 aa15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 NEK1Q96PY6 1258 aa15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 ZDHHC9Q9Y397 364 aa15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 TCRBV5S4A2TA0A5A2 114 aa15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 FOXP2O15409 715 aa15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 MMP10P09238 476 aa15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 SF3B2Q13435 895 aaKnown RBP15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 CUL4AQ13619 759 aa15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 TMC4Q7Z404 712 aa15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
TNFAIP3-209ENST00000619035 COL1A1P02452 1464 aaPredicted RBP15.11■□□□□ 0.01
TNFAIP3-209ENST00000619035 SEMA3EO15041 775 aa15.11■□□□□ 0.01
TNFAIP3-209ENST00000619035 BAG4O95429 457 aaKnown RBP15.11■□□□□ 0.01
TNFAIP3-209ENST00000619035 APPP05067 770 aa15.11■□□□□ 0.01
TNFAIP3-209ENST00000619035 HIBADHP31937 336 aaKnown RBP15.11■□□□□ 0.01
TNFAIP3-209ENST00000619035 HAND2P61296 217 aa15.11■□□□□ 0.01
TNFAIP3-209ENST00000619035 BRIP1Q9BX63 1249 aa15.11■□□□□ 0.01
TNFAIP3-209ENST00000619035 ANO8Q9HCE9 1232 aaPredicted RBP15.11■□□□□ 0.01
TNFAIP3-209ENST00000619035 BBOX1O75936 387 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 LARGE1O95461 756 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 BAG6P46379 1132 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 SLC15A2Q16348 729 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 STOX1Q6ZVD7 989 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 TXNRD3Q86VQ6 643 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 CRAMP1Q96RY5 1269 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 RAI14Q9P0K7 980 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 DENND2AQ9ULE3 1009 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 PDS5AQ29RF7 1337 aaKnown RBP15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 FGAP02671 866 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 FBXO33Q7Z6M2 555 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 GPR101Q96P66 508 aaPredicted RBP15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 STK32BQ9NY57 414 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 CTNNA3Q9UI47 895 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 NSFL1CQ9UNZ2 370 aaKnown RBP15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 LEMD3Q9Y2U8 911 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 PARP3Q9Y6F1 533 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 DOCK2Q92608 1830 aa15.1■□□□□ 0.01
TNFAIP3-209ENST00000619035 XDHP47989 1333 aa15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 IGSF3O75054 1194 aa15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 MBD4O95243 580 aa15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 NUCB2P80303 420 aa15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 CHAF1AQ13111 956 aaPredicted RBP15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 IMMTQ16891 758 aaKnown RBP15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 E7EWF7 191 aa15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 MCTP1Q6DN14 999 aa15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 TMED8Q6PL24 325 aaPredicted RBP15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 MIGA1Q8NAN2 632 aa15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 INTS4Q96HW7 963 aaKnown RBP15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 ARMT1Q9H993 441 aa15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 JAG2Q9Y219 1238 aa15.09■□□□□ 0.01
TNFAIP3-209ENST00000619035 GPSM2P81274 684 aa15.08■□□□□ 0
TNFAIP3-209ENST00000619035 FGD1P98174 961 aa15.08■□□□□ 0
TNFAIP3-209ENST00000619035 CCDC125Q86Z20 511 aa15.08■□□□□ 0
TNFAIP3-209ENST00000619035 CCDC83Q8IWF9 413 aa15.08■□□□□ 0
TNFAIP3-209ENST00000619035 LRRC2Q9BYS8 371 aa15.08■□□□□ 0
TNFAIP3-209ENST00000619035 ANKRD1Q15327 319 aa15.08■□□□□ 0
TNFAIP3-209ENST00000619035 C15orf52Q6ZUT6 534 aaKnown RBP15.08■□□□□ 0
TNFAIP3-209ENST00000619035 STRBPQ96SI9 672 aaKnown RBP15.08■□□□□ 0
TNFAIP3-209ENST00000619035 TPCN1Q9ULQ1 816 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms