RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	CAMKK2	Q96RR4	588 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	MAP3K14	Q99558	947 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RWDD1	Q9H446	243 aa	Predicted RBP	4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RABL2B	Q9UNT1	228 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	KIAA1107	Q9UPP5	1409 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RPN1	P04843	607 aa	Known RBP	4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PDGFRB	P09619	1106 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	KCNA6	P17658	529 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	GNAL	P38405	381 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PIK3CA	P42336	1068 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PPM1E	Q8WY54	764 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	GDPD2	Q9HCC8	539 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	HMX1	Q9NP08	348 aa	Predicted RBP	4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CHST12	Q9NRB3	414 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TYW1	Q9NV66	732 aa	Known RBP	4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	DCAF16	Q9NXF7	216 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TRPM2	O94759	1503 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	LTBP1	Q14766	1721 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ERCC5	P28715	1186 aa	Predicted RBP	4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ANKRD45	Q5TZF3	282 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TAS1R3	Q7RTX0	852 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	LCA5	Q86VQ0	697 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TDRD7	Q8NHU6	1098 aa	Known RBP	4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TBC1D22A	Q8WUA7	517 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	C17orf50	Q8WW18	174 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CENPT	Q96BT3	561 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RMI1	Q9H9A7	625 aa		4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RRBP1	Q9P2E9	1410 aa	Known RBP	4.85	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TUBGCP6	Q96RT7	1819 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	FAM25E	A8MYX2	175 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	BOLA2-SMG1P6	H3BVE0	249 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	PPFIA3	O75145	1194 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CCDC175	P0C221	793 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	SRGN	P10124	158 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	LMNB1	P20700	586 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	NOP2	P46087	812 aa	Known RBP	4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	MARS	P56192	900 aa	Known RBP	4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	GUCA2A	Q02747	115 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	LRCH2	Q5VUJ6	765 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	BRSK2	Q8IWQ3	736 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ARL6IP6	Q8N6S5	226 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	APPL2	Q8NEU8	664 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	JDP2	Q8WYK2	163 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TANGO6	Q9C0B7	1094 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	DHX36	Q9H2U1	1008 aa	Known RBP	4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	LRRIQ1	Q96JM4	1722 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	POTEB2	H3BUK9	544 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	SETSIP	P0DME0	302 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	MLLT1	Q03111	559 aa	Predicted RBP	4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	EN1	Q05925	392 aa	Predicted RBP	4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RBL2	Q08999	1139 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	TAF11	Q15544	211 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	CFAP70	Q5T0N1	1121 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	RNF187	Q5TA31	235 aa	Predicted RBP	4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	EPS8L1	Q8TE68	723 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	SH3TC2	Q8TF17	1288 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ZBTB10	Q96DT7	871 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	MSH6	P52701	1360 aa		4.84	□□□□□ -1.63
UBE2D3-233	ENST00000618836	ERICH4	A6NGS2	130 aa		4.84	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PTGER2	P43116	358 aa		4.84	□□□□□ -1.64
UBE2D3-233	ENST00000618836	ZSCAN26	Q16670	478 aa		4.84	□□□□□ -1.64
UBE2D3-233	ENST00000618836	CDC37L1	Q7L3B6	337 aa		4.84	□□□□□ -1.64
UBE2D3-233	ENST00000618836	SLC43A3	Q8NBI5	491 aa		4.84	□□□□□ -1.64
UBE2D3-233	ENST00000618836	GCC1	Q96CN9	775 aa		4.84	□□□□□ -1.64
UBE2D3-233	ENST00000618836	RBSN	Q9H1K0	784 aa		4.84	□□□□□ -1.64
UBE2D3-233	ENST00000618836	XPO7	Q9UIA9	1087 aa	Known RBP	4.84	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PCDHB15	Q9Y5E8	787 aa		4.84	□□□□□ -1.64
UBE2D3-233	ENST00000618836	GJA3	Q9Y6H8	435 aa		4.84	□□□□□ -1.64
UBE2D3-233	ENST00000618836	DDX49	Q9Y6V7	483 aa	Known RBP	4.84	□□□□□ -1.64
UBE2D3-233	ENST00000618836	BRCA1	P38398	1863 aa	Known RBP	4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	MLEC	Q14165	292 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PKN1	Q16512	942 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	DDB1	Q16531	1140 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	FXN	Q16595	210 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	FILIP1L	Q4L180	1135 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PRPF38B	Q5VTL8	546 aa	Known RBP	4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	CCDC89	Q8N998	374 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	DMGDH	Q9UI17	866 aa	Known RBP	4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	USP19	O94966	1318 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	GOLGA6L6	A8MZA4	724 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	C19orf81	C9J6K1	198 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	OAT	P04181	439 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	SSTR3	P32745	418 aa	Predicted RBP	4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	AMPD3	Q01432	767 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	RAPGEF1	Q13905	1077 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	SEPT2	Q15019	361 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	TAF7	Q15545	349 aa	Predicted RBP	4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	JAKMIP3	Q5VZ66	844 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	PDXDC2P	Q6P474	469 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	FBXO33	Q7Z6M2	555 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	GLMN	Q92990	594 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	IWS1	Q96ST2	819 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	FAM167B	Q9BTA0	163 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	TSPY26P	Q9H489	355 aa		4.83	□□□□□ -1.64
UBE2D3-233	ENST00000618836	FAM217B	Q9NTX9	383 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms