RNA–Protein interactions for RNA: ENST00000618829.4

SYNRG-224, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 3,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-224ENST00000618829 HMGN5P82970 282 aaKnown RBP8.33□□□□□ -1.08
SYNRG-224ENST00000618829 FOXO4P98177 505 aa8.33□□□□□ -1.08
SYNRG-224ENST00000618829 CCDC73Q6ZRK6 1079 aa8.33□□□□□ -1.08
SYNRG-224ENST00000618829 MYRIPQ8NFW9 859 aa8.33□□□□□ -1.08
SYNRG-224ENST00000618829 ZSCAN16Q9H4T2 348 aaPredicted RBP8.33□□□□□ -1.08
SYNRG-224ENST00000618829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.33□□□□□ -1.083e-7■■□□□ 12
SYNRG-224ENST00000618829 NRBP1Q9UHY1 535 aa8.33□□□□□ -1.08
SYNRG-224ENST00000618829 A0A087WWV3 80 aa8.33□□□□□ -1.08
SYNRG-224ENST00000618829 A0A1B0GUL7 405 aa8.33□□□□□ -1.08
SYNRG-224ENST00000618829 HMGB1P09429 215 aaKnown RBP8.33□□□□□ -1.08
SYNRG-224ENST00000618829 IL15P40933 162 aaPredicted RBP8.33□□□□□ -1.08
SYNRG-224ENST00000618829 LRMPQ12912 555 aa8.33□□□□□ -1.08
SYNRG-224ENST00000618829 MAP7D2Q96T17 732 aa8.33□□□□□ -1.08
SYNRG-224ENST00000618829 CEP126Q9P2H0 1117 aa8.33□□□□□ -1.08
SYNRG-224ENST00000618829 KIF3AQ9Y496 699 aa8.33□□□□□ -1.08
SYNRG-224ENST00000618829 E7EWF7 191 aa8.32□□□□□ -1.08
SYNRG-224ENST00000618829 HSPD1P10809 573 aaKnown RBP8.32□□□□□ -1.08
SYNRG-224ENST00000618829 TTC39AQ5SRH9 613 aa8.32□□□□□ -1.08
SYNRG-224ENST00000618829 ATG9AQ7Z3C6 839 aa8.32□□□□□ -1.08
SYNRG-224ENST00000618829 ERCC4Q92889 916 aaPredicted RBP8.32□□□□□ -1.08
SYNRG-224ENST00000618829 PRIMPOLQ96LW4 560 aa8.32□□□□□ -1.08
SYNRG-224ENST00000618829 BECN2A8MW95 431 aa8.32□□□□□ -1.08
SYNRG-224ENST00000618829 H7C1W4 665 aa8.32□□□□□ -1.08
SYNRG-224ENST00000618829 CCDC57Q2TAC2 916 aa8.32□□□□□ -1.08
SYNRG-224ENST00000618829 NSUN7Q8NE18 718 aaKnown RBP8.32□□□□□ -1.08
SYNRG-224ENST00000618829 KIAA1524Q8TCG1 905 aa8.32□□□□□ -1.08
SYNRG-224ENST00000618829 PRDM11Q9NQV5 511 aa8.32□□□□□ -1.08
SYNRG-224ENST00000618829 STRN4Q9NRL3 753 aa8.32□□□□□ -1.08
SYNRG-224ENST00000618829 HELLSQ9NRZ9 838 aa8.32□□□□□ -1.08
SYNRG-224ENST00000618829 EYA2O00167 538 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 RNF113AO15541 343 aaKnown RBP8.31□□□□□ -1.08
SYNRG-224ENST00000618829 PFKFB2O60825 505 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 KINO60870 393 aaKnown RBP8.31□□□□□ -1.08
SYNRG-224ENST00000618829 CCDC158Q5M9N0 1113 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 ZCRB1Q8TBF4 217 aaKnown RBP8.31□□□□□ -1.08
SYNRG-224ENST00000618829 CLIP2Q9UDT6 1046 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 SH3TC1Q8TE82 1336 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 CASP7P55210 303 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 SF3A1Q15459 793 aaKnown RBP8.31□□□□□ -1.08
SYNRG-224ENST00000618829 OTUD7BQ6GQQ9 843 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 ZNF396Q96N95 335 aaPredicted RBP8.31□□□□□ -1.08
SYNRG-224ENST00000618829 GPHNQ9NQX3 736 aaPredicted RBP8.31□□□□□ -1.08
SYNRG-224ENST00000618829 MYH14Q7Z406 1995 aaKnown RBP8.31□□□□□ -1.08
SYNRG-224ENST00000618829 KAT6BQ8WYB5 2073 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 MAST3O60307 1309 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 M0R2C6 588 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 ZMYM1Q5SVZ6 1142 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 C16orf45Q96MC5 204 aaPredicted RBP8.31□□□□□ -1.08
SYNRG-224ENST00000618829 USP28Q96RU2 1077 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 JCADQ9P266 1359 aa8.31□□□□□ -1.08
SYNRG-224ENST00000618829 CTDNEP1O95476 244 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 POLR3DP05423 398 aaPredicted RBP8.3□□□□□ -1.08
SYNRG-224ENST00000618829 ZNF75DP51815 510 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 ZRSR1Q15695 479 aaKnown RBP8.3□□□□□ -1.08
SYNRG-224ENST00000618829 FSIP1Q8NA03 581 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 DSCC1Q9BVC3 393 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 ZMYND15Q9H091 742 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 ADORA1P30542 326 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 ZNF592Q92610 1267 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 SDF4Q9BRK5 362 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 LLPHQ9BRT6 129 aaKnown RBP8.3□□□□□ -1.08
SYNRG-224ENST00000618829 SPTLC3Q9NUV7 552 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 CPLX1O14810 134 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 PDIA3P30101 505 aaKnown RBP8.3□□□□□ -1.08
SYNRG-224ENST00000618829 C11orf57Q6ZUT1 292 aaPredicted RBP8.3□□□□□ -1.08
SYNRG-224ENST00000618829 MTERF4Q7Z6M4 381 aaKnown RBP8.3□□□□□ -1.08
SYNRG-224ENST00000618829 SMARCC2Q8TAQ2 1214 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 OSBP2Q969R2 916 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 FAM89AQ96GI7 184 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 GOLPH3LQ9H4A5 285 aa8.3□□□□□ -1.08
SYNRG-224ENST00000618829 COL11A2P13942 1736 aaPredicted RBP8.3□□□□□ -1.08
SYNRG-224ENST00000618829 TNRC6CQ9HCJ0 1690 aaKnown RBP8.29□□□□□ -1.08
SYNRG-224ENST00000618829 RIOK3O14730 519 aaKnown RBP8.29□□□□□ -1.08
SYNRG-224ENST00000618829 IMMTQ16891 758 aaKnown RBP8.29□□□□□ -1.08
SYNRG-224ENST00000618829 CCDC191Q8NCU4 936 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 APPP05067 770 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 EVA1CP58658 441 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 STK38Q15208 465 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 TPD52L1Q16890 204 aaPredicted RBP8.29□□□□□ -1.08
SYNRG-224ENST00000618829 NAA16Q6N069 864 aaPredicted RBP8.29□□□□□ -1.08
SYNRG-224ENST00000618829 PI16Q6UXB8 463 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 FILIP1Q7Z7B0 1213 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 RALYLQ86SE5 291 aaKnown RBP8.29□□□□□ -1.08
SYNRG-224ENST00000618829 XAGE2Q96GT9 111 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 RFX7Q2KHR2 1363 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 PALLDQ8WX93 1383 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 KLF18A0A0U1RQI7 1052 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 A0A1B0GVL5 298 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 GOLGA8BA8MQT2 603 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 GPTP24298 496 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 EXOSC10Q01780 885 aaKnown RBP8.29□□□□□ -1.08
SYNRG-224ENST00000618829 STX1AQ16623 288 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 ZSCAN25Q6NSZ9 544 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 TDRD7Q8NHU6 1098 aaKnown RBP8.29□□□□□ -1.08
SYNRG-224ENST00000618829 SOS2Q07890 1332 aaPredicted RBP8.29□□□□□ -1.08
SYNRG-224ENST00000618829 PCDH11XQ9BZA7 1347 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 PCDH11YQ9BZA8 1340 aa8.29□□□□□ -1.08
SYNRG-224ENST00000618829 ZAP70P43403 619 aa8.28□□□□□ -1.08
SYNRG-224ENST00000618829 LRRFIP1Q32MZ4 808 aaKnown RBP8.28□□□□□ -1.08
SYNRG-224ENST00000618829 C8orf76Q96K31 380 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms