RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 RXRBP28702 533 aa6.53□□□□□ -1.36
TARDBP-220ENST00000618606 PDE12Q6L8Q7 609 aaKnown RBP6.53□□□□□ -1.36
TARDBP-220ENST00000618606 SMG8Q8ND04 991 aaKnown RBP6.53□□□□□ -1.36
TARDBP-220ENST00000618606 TMPRSS13Q9BYE2 586 aa6.53□□□□□ -1.36
TARDBP-220ENST00000618606 SUGCTQ9HAC7 445 aa6.53□□□□□ -1.36
TARDBP-220ENST00000618606 FAM95CA0A1B0GW59 222 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 NFKBIEO00221 500 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 CYP26A1O43174 497 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 TIAF1O95411 115 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 ARL4DP49703 201 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 C19orf57Q0VDD7 668 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 NUTM2GQ5VZR2 741 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 SHISA5Q8N114 240 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 C12orf50Q8NA57 414 aaPredicted RBP6.52□□□□□ -1.37
TARDBP-220ENST00000618606 AGBL5Q8NDL9 886 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 GPR152Q8TDT2 470 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 SLC7A3Q8WY07 619 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 SALL4Q9UJQ4 1053 aa6.52□□□□□ -1.37
TARDBP-220ENST00000618606 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.51□□□□□ -1.37
TARDBP-220ENST00000618606 NAA30Q147X3 362 aaPredicted RBP6.51□□□□□ -1.37
TARDBP-220ENST00000618606 TMEM164Q5U3C3 297 aa6.51□□□□□ -1.37
TARDBP-220ENST00000618606 PAOXQ6QHF9 649 aa6.51□□□□□ -1.37
TARDBP-220ENST00000618606 CLP1Q92989 425 aaKnown RBP6.51□□□□□ -1.37
TARDBP-220ENST00000618606 ELP3Q9H9T3 547 aa6.51□□□□□ -1.37
TARDBP-220ENST00000618606 CYP4F12Q9HCS2 524 aa6.51□□□□□ -1.37
TARDBP-220ENST00000618606 DZANK1Q9NVP4 752 aa6.51□□□□□ -1.37
TARDBP-220ENST00000618606 SOX13Q9UN79 622 aa6.51□□□□□ -1.37
TARDBP-220ENST00000618606 PDE2AO00408 941 aaPredicted RBP6.5□□□□□ -1.37
TARDBP-220ENST00000618606 NFKBIBQ15653 356 aa6.5□□□□□ -1.37
TARDBP-220ENST00000618606 PAK6Q9NQU5 681 aaPredicted RBP6.5□□□□□ -1.37
TARDBP-220ENST00000618606 TMEM63CQ9P1W3 806 aa6.5□□□□□ -1.37
TARDBP-220ENST00000618606 STIM2Q9P246 746 aa6.5□□□□□ -1.37
TARDBP-220ENST00000618606 KANSL3Q9P2N6 904 aa6.5□□□□□ -1.37
TARDBP-220ENST00000618606 ZBTB39O15060 712 aa6.49□□□□□ -1.37
TARDBP-220ENST00000618606 ADMP35318 185 aa6.49□□□□□ -1.37
TARDBP-220ENST00000618606 HGSNATQ68CP4 663 aa6.49□□□□□ -1.37
TARDBP-220ENST00000618606 ZAR1Q86SH2 424 aa6.49□□□□□ -1.37
TARDBP-220ENST00000618606 FLCNQ8NFG4 579 aa6.49□□□□□ -1.37
TARDBP-220ENST00000618606 MKNK1Q9BUB5 465 aa6.49□□□□□ -1.37
TARDBP-220ENST00000618606 CNTN3Q9P232 1028 aa6.49□□□□□ -1.37
TARDBP-220ENST00000618606 SLAIN2Q9P270 581 aa6.49□□□□□ -1.37
TARDBP-220ENST00000618606 SOX1O00570 391 aaPredicted RBP6.48□□□□□ -1.37
TARDBP-220ENST00000618606 ACPPP15309 386 aa6.48□□□□□ -1.37
TARDBP-220ENST00000618606 USP11P51784 963 aa6.48□□□□□ -1.37
TARDBP-220ENST00000618606 CDPF1Q6NVV7 123 aa6.48□□□□□ -1.37
TARDBP-220ENST00000618606 ABTB2Q8N961 1025 aa6.48□□□□□ -1.37
TARDBP-220ENST00000618606 EZH1Q92800 747 aaPredicted RBP6.48□□□□□ -1.37
TARDBP-220ENST00000618606 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.48□□□□□ -1.37
TARDBP-220ENST00000618606 LOC100289279A0A1B0GTE1 492 aa6.47□□□□□ -1.37
TARDBP-220ENST00000618606 PAPLNO95428 1278 aa6.47□□□□□ -1.37
TARDBP-220ENST00000618606 FBLN7Q53RD9 439 aa6.47□□□□□ -1.37
TARDBP-220ENST00000618606 EXOSC6Q5RKV6 272 aaKnown RBP6.47□□□□□ -1.37
TARDBP-220ENST00000618606 XKR5Q6UX68 686 aa6.47□□□□□ -1.37
TARDBP-220ENST00000618606 ZNF438Q7Z4V0 828 aa6.47□□□□□ -1.37
TARDBP-220ENST00000618606 TMEM102Q8N9M5 508 aaPredicted RBP6.47□□□□□ -1.37
TARDBP-220ENST00000618606 FBLIM1Q8WUP2 373 aa6.47□□□□□ -1.37
TARDBP-220ENST00000618606 GATA6Q92908 595 aa6.47□□□□□ -1.37
TARDBP-220ENST00000618606 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
TARDBP-220ENST00000618606 PRKAG2Q9UGJ0 569 aa6.47□□□□□ -1.37
TARDBP-220ENST00000618606 DBX1A6NMT0 343 aa6.46□□□□□ -1.38
TARDBP-220ENST00000618606 C2CD4AQ8NCU7 369 aaPredicted RBP6.46□□□□□ -1.38
TARDBP-220ENST00000618606 BSNDQ8WZ55 320 aa6.46□□□□□ -1.38
TARDBP-220ENST00000618606 PBXIP1Q96AQ6 731 aa6.46□□□□□ -1.38
TARDBP-220ENST00000618606 HHIPQ96QV1 700 aa6.46□□□□□ -1.38
TARDBP-220ENST00000618606 YIPF2Q9BWQ6 316 aa6.46□□□□□ -1.38
TARDBP-220ENST00000618606 USP26Q9BXU7 913 aa6.46□□□□□ -1.38
TARDBP-220ENST00000618606 SOX17Q9H6I2 414 aaPredicted RBP6.46□□□□□ -1.38
TARDBP-220ENST00000618606 FAM170BA6NMN3 283 aa6.45□□□□□ -1.38
TARDBP-220ENST00000618606 TRPA1O75762 1119 aa6.45□□□□□ -1.38
TARDBP-220ENST00000618606 DLGAP3O95886 979 aa6.45□□□□□ -1.38
TARDBP-220ENST00000618606 RPLP1P05386 114 aaKnown RBP6.45□□□□□ -1.38
TARDBP-220ENST00000618606 DRD2P14416 443 aa6.45□□□□□ -1.38
TARDBP-220ENST00000618606 CES1P23141 567 aa6.45□□□□□ -1.38
TARDBP-220ENST00000618606 IKBKEQ14164 716 aa6.45□□□□□ -1.38
TARDBP-220ENST00000618606 ZNF648Q5T619 568 aaPredicted RBP6.45□□□□□ -1.38
TARDBP-220ENST00000618606 VN1R5Q7Z5H4 357 aa6.45□□□□□ -1.38
TARDBP-220ENST00000618606 C1orf127Q8N9H9 656 aa6.45□□□□□ -1.38
TARDBP-220ENST00000618606 NUDT16Q96DE0 195 aaKnown RBP6.45□□□□□ -1.38
TARDBP-220ENST00000618606 ZC3H7BQ9UGR2 993 aaKnown RBP6.45□□□□□ -1.38
TARDBP-220ENST00000618606 BIN1O00499 593 aa6.44□□□□□ -1.38
TARDBP-220ENST00000618606 SOX4Q06945 474 aaPredicted RBP6.44□□□□□ -1.38
TARDBP-220ENST00000618606 DUSP27Q5VZP5 1158 aa6.44□□□□□ -1.38
TARDBP-220ENST00000618606 SPOCD1Q6ZMY3 1216 aa6.44□□□□□ -1.38
TARDBP-220ENST00000618606 PMEPA1Q969W9 287 aa6.44□□□□□ -1.38
TARDBP-220ENST00000618606 NXPE3Q969Y0 559 aa6.44□□□□□ -1.38
TARDBP-220ENST00000618606 KRTAP4-11Q9BYQ6 195 aa6.44□□□□□ -1.38
TARDBP-220ENST00000618606 SEPT3Q9UH03 358 aa6.44□□□□□ -1.38
TARDBP-220ENST00000618606 ATP2B4P23634 1241 aa6.43□□□□□ -1.38
TARDBP-220ENST00000618606 CYP27A1Q02318 531 aa6.43□□□□□ -1.38
TARDBP-220ENST00000618606 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.43□□□□□ -1.38
TARDBP-220ENST00000618606 EIF4EBP3O60516 100 aaPredicted RBP6.42□□□□□ -1.38
TARDBP-220ENST00000618606 SERPINA10Q9UK55 444 aa6.42□□□□□ -1.38
TARDBP-220ENST00000618606 SLC5A6Q9Y289 635 aa6.42□□□□□ -1.38
TARDBP-220ENST00000618606 CARMIL2Q6F5E8 1435 aa6.42□□□□□ -1.38
TARDBP-220ENST00000618606 MAP7Q14244 749 aa6.41□□□□□ -1.38
TARDBP-220ENST00000618606 ZNF124Q15973 351 aa6.41□□□□□ -1.38
TARDBP-220ENST00000618606 ATCAYQ86WG3 371 aa6.41□□□□□ -1.38
TARDBP-220ENST00000618606 BCL7CQ8WUZ0 217 aaPredicted RBP6.41□□□□□ -1.38
TARDBP-220ENST00000618606 OSMRQ99650 979 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms