RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 GRAPQ13588 217 aa13.43□□□□□ -0.26
CPEB1-216ENST00000618449 CRY2Q49AN0 593 aa13.43□□□□□ -0.26
CPEB1-216ENST00000618449 ZSCAN25Q6NSZ9 544 aa13.43□□□□□ -0.26
CPEB1-216ENST00000618449 GRAPLQ8TC17 118 aaPredicted RBP13.43□□□□□ -0.26
CPEB1-216ENST00000618449 INTS4Q96HW7 963 aaKnown RBP13.43□□□□□ -0.26
CPEB1-216ENST00000618449 DSCC1Q9BVC3 393 aa13.43□□□□□ -0.26
CPEB1-216ENST00000618449 ANKRD2Q9GZV1 360 aa13.43□□□□□ -0.26
CPEB1-216ENST00000618449 ZNF804BA4D1E1 1349 aa13.43□□□□□ -0.26
CPEB1-216ENST00000618449 RPAP1Q9BWH6 1393 aaPredicted RBP13.43□□□□□ -0.26
CPEB1-216ENST00000618449 MYO5AQ9Y4I1 1855 aaKnown RBP13.43□□□□□ -0.26
CPEB1-216ENST00000618449 MYH7P12883 1935 aa13.43□□□□□ -0.26
CPEB1-216ENST00000618449 CYP21A2P08686 494 aa13.42□□□□□ -0.26
CPEB1-216ENST00000618449 XRCC6P12956 609 aaKnown RBP eCLIP13.42□□□□□ -0.26
CPEB1-216ENST00000618449 AK2P54819 239 aa13.42□□□□□ -0.26
CPEB1-216ENST00000618449 COL9A3Q14050 684 aaPredicted RBP13.42□□□□□ -0.26
CPEB1-216ENST00000618449 TSGA10IPQ3SY00 556 aa13.42□□□□□ -0.26
CPEB1-216ENST00000618449 SLC51AQ86UW1 340 aa13.42□□□□□ -0.26
CPEB1-216ENST00000618449 WWC3Q9ULE0 1092 aa13.42□□□□□ -0.26
CPEB1-216ENST00000618449 IQSEC3Q9UPP2 1182 aaPredicted RBP13.42□□□□□ -0.26
CPEB1-216ENST00000618449 KLRK1P26718 216 aa13.42□□□□□ -0.26
CPEB1-216ENST00000618449 KLHL40Q2TBA0 621 aa13.42□□□□□ -0.26
CPEB1-216ENST00000618449 RUFY3Q7L099 469 aa13.42□□□□□ -0.26
CPEB1-216ENST00000618449 NLGN1Q8N2Q7 840 aa13.42□□□□□ -0.26
CPEB1-216ENST00000618449 RPGRQ92834 1020 aaKnown RBP13.42□□□□□ -0.26
CPEB1-216ENST00000618449 FAM84BQ96KN1 310 aaPredicted RBP13.42□□□□□ -0.26
CPEB1-216ENST00000618449 CYP46A1Q9Y6A2 500 aa13.42□□□□□ -0.26
CPEB1-216ENST00000618449 PDE6AP16499 860 aa13.41□□□□□ -0.26
CPEB1-216ENST00000618449 UBE3CQ15386 1083 aa13.41□□□□□ -0.26
CPEB1-216ENST00000618449 CAVIN4Q5BKX8 364 aa13.41□□□□□ -0.26
CPEB1-216ENST00000618449 FLAD1Q8NFF5 587 aa13.41□□□□□ -0.26
CPEB1-216ENST00000618449 DDX49Q9Y6V7 483 aaKnown RBP13.41□□□□□ -0.26
CPEB1-216ENST00000618449 PNPLA7Q6ZV29 1317 aa13.41□□□□□ -0.26
CPEB1-216ENST00000618449 ZNF532Q9HCE3 1301 aa13.41□□□□□ -0.26
CPEB1-216ENST00000618449 FOXP2O15409 715 aa13.41□□□□□ -0.26
CPEB1-216ENST00000618449 PSMA5P28066 241 aa13.41□□□□□ -0.26
CPEB1-216ENST00000618449 MRE11P49959 708 aa13.41□□□□□ -0.26
CPEB1-216ENST00000618449 PDRG1Q9NUG6 133 aa13.41□□□□□ -0.26
CPEB1-216ENST00000618449 RGPD3A6NKT7 1758 aaPredicted RBP13.41□□□□□ -0.26
CPEB1-216ENST00000618449 RGPD4Q7Z3J3 1758 aa13.41□□□□□ -0.26
CPEB1-216ENST00000618449 TCRBV5S4A2TA0A5A2 114 aa13.4□□□□□ -0.26
CPEB1-216ENST00000618449 GPAA1O43292 621 aa13.4□□□□□ -0.26
CPEB1-216ENST00000618449 EN1Q05925 392 aaPredicted RBP13.4□□□□□ -0.26
CPEB1-216ENST00000618449 EZH2Q15910 746 aaKnown RBP13.4□□□□□ -0.26
CPEB1-216ENST00000618449 VPS37DQ86XT2 251 aa13.4□□□□□ -0.26
CPEB1-216ENST00000618449 LARP6Q9BRS8 491 aaKnown RBP13.4□□□□□ -0.26
CPEB1-216ENST00000618449 GNL3LQ9NVN8 582 aaKnown RBP13.4□□□□□ -0.26
CPEB1-216ENST00000618449 MAP3K12Q12852 859 aa13.4□□□□□ -0.26
CPEB1-216ENST00000618449 LMBRD1Q9NUN5 540 aa13.4□□□□□ -0.26
CPEB1-216ENST00000618449 COL1A1P02452 1464 aaPredicted RBP13.39□□□□□ -0.27
CPEB1-216ENST00000618449 A0A0G2JLW4 131 aa13.39□□□□□ -0.27
CPEB1-216ENST00000618449 KRT32Q14532 448 aa13.39□□□□□ -0.27
CPEB1-216ENST00000618449 BLOC1S2Q6QNY1 142 aa13.39□□□□□ -0.27
CPEB1-216ENST00000618449 FBXO33Q7Z6M2 555 aa13.39□□□□□ -0.27
CPEB1-216ENST00000618449 MAGEB6Q8N7X4 407 aa13.39□□□□□ -0.27
CPEB1-216ENST00000618449 CAMKK2Q96RR4 588 aa13.39□□□□□ -0.27
CPEB1-216ENST00000618449 GRPEL1Q9HAV7 217 aa13.39□□□□□ -0.27
CPEB1-216ENST00000618449 DOCK2Q92608 1830 aa13.39□□□□□ -0.27
CPEB1-216ENST00000618449 BRD1O95696 1058 aa13.39□□□□□ -0.27
CPEB1-216ENST00000618449 RBM17Q96I25 401 aaKnown RBP13.39□□□□□ -0.27
CPEB1-216ENST00000618449 PANK2Q9BZ23 570 aa13.39□□□□□ -0.27
CPEB1-216ENST00000618449 ANKIB1Q9P2G1 1089 aa13.39□□□□□ -0.27
CPEB1-216ENST00000618449 LIMCH1Q9UPQ0 1083 aa13.39□□□□□ -0.27
CPEB1-216ENST00000618449 KLRG2A4D1S0 409 aaPredicted RBP13.38□□□□□ -0.27
CPEB1-216ENST00000618449 RPS6KB1P23443 525 aa13.38□□□□□ -0.27
CPEB1-216ENST00000618449 TTLL5Q6EMB2 1281 aa13.38□□□□□ -0.27
CPEB1-216ENST00000618449 STOX1Q6ZVD7 989 aa13.38□□□□□ -0.27
CPEB1-216ENST00000618449 TXNRD3Q86VQ6 643 aa13.38□□□□□ -0.27
CPEB1-216ENST00000618449 TCEANC2Q96MN5 208 aa13.38□□□□□ -0.27
CPEB1-216ENST00000618449 NEK1Q96PY6 1258 aa13.38□□□□□ -0.27
CPEB1-216ENST00000618449 HOXA10P31260 410 aaPredicted RBP13.38□□□□□ -0.27
CPEB1-216ENST00000618449 FOXD4L5Q5VV16 416 aaPredicted RBP13.38□□□□□ -0.27
CPEB1-216ENST00000618449 FOXD4L4Q8WXT5 416 aaPredicted RBP13.38□□□□□ -0.27
CPEB1-216ENST00000618449 LRP2BPQ9P2M1 347 aa13.38□□□□□ -0.27
CPEB1-216ENST00000618449 IRS2Q9Y4H2 1338 aa13.37□□□□□ -0.27
CPEB1-216ENST00000618449 FGAP02671 866 aa13.37□□□□□ -0.27
CPEB1-216ENST00000618449 MMP10P09238 476 aa13.37□□□□□ -0.27
CPEB1-216ENST00000618449 HIBADHP31937 336 aaKnown RBP13.37□□□□□ -0.27
CPEB1-216ENST00000618449 MSL1Q68DK7 614 aa13.37□□□□□ -0.27
CPEB1-216ENST00000618449 ABCF2Q9UG63 623 aa13.37□□□□□ -0.27
CPEB1-216ENST00000618449 DENND2AQ9ULE3 1009 aa13.37□□□□□ -0.27
CPEB1-216ENST00000618449 XDHP47989 1333 aa13.37□□□□□ -0.27
CPEB1-216ENST00000618449 GAS2L3Q86XJ1 694 aa13.37□□□□□ -0.27
CPEB1-216ENST00000618449 FAM43AQ8N2R8 423 aa13.37□□□□□ -0.27
CPEB1-216ENST00000618449 BRIP1Q9BX63 1249 aa13.37□□□□□ -0.27
CPEB1-216ENST00000618449 LARGE1O95461 756 aa13.36□□□□□ -0.27
CPEB1-216ENST00000618449 SLC15A2Q16348 729 aa13.36□□□□□ -0.27
CPEB1-216ENST00000618449 AIDAQ96BJ3 306 aa13.36□□□□□ -0.27
CPEB1-216ENST00000618449 CTNNA3Q9UI47 895 aa13.36□□□□□ -0.27
CPEB1-216ENST00000618449 LEMD3Q9Y2U8 911 aa13.36□□□□□ -0.27
CPEB1-216ENST00000618449 NRXN2Q9P2S2 1712 aa13.36□□□□□ -0.27
CPEB1-216ENST00000618449 SEMA3EO15041 775 aa13.36□□□□□ -0.27
CPEB1-216ENST00000618449 PRPF40AO75400 957 aaKnown RBP13.36□□□□□ -0.27
CPEB1-216ENST00000618449 BBOX1O75936 387 aa13.36□□□□□ -0.27
CPEB1-216ENST00000618449 GPSM2P81274 684 aa13.36□□□□□ -0.27
CPEB1-216ENST00000618449 CRAMP1Q96RY5 1269 aa13.36□□□□□ -0.27
CPEB1-216ENST00000618449 STRBPQ96SI9 672 aaKnown RBP13.36□□□□□ -0.27
CPEB1-216ENST00000618449 PARP3Q9Y6F1 533 aa13.36□□□□□ -0.27
CPEB1-216ENST00000618449 ANKRD31Q8N7Z5 1873 aa13.36□□□□□ -0.27
CPEB1-216ENST00000618449 TCHHQ07283 1943 aa13.35□□□□□ -0.27
CPEB1-216ENST00000618449 E7EWF7 191 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms