RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 TPTE2Q6XPS3 522 aa20.87■□□□□ 0.93
CNOT3-209ENST00000617930 MROH5Q6ZUA9 1318 aa20.87■□□□□ 0.93
CNOT3-209ENST00000617930 ALDH8A1Q9H2A2 487 aaPredicted RBP20.87■□□□□ 0.93
CNOT3-209ENST00000617930 AKAP11Q9UKA4 1901 aa20.87■□□□□ 0.93
CNOT3-209ENST00000617930 ARAP2Q8WZ64 1704 aa20.87■□□□□ 0.93
CNOT3-209ENST00000617930 TTLL5Q6EMB2 1281 aa20.87■□□□□ 0.93
CNOT3-209ENST00000617930 PIH1D3Q9NQM4 214 aaKnown RBP20.87■□□□□ 0.93
CNOT3-209ENST00000617930 PUM3Q15397 648 aaKnown RBP20.86■□□□□ 0.93
CNOT3-209ENST00000617930 LPIN2Q92539 896 aa20.86■□□□□ 0.93
CNOT3-209ENST00000617930 NEK1Q96PY6 1258 aa20.86■□□□□ 0.93
CNOT3-209ENST00000617930 POLRMTO00411 1230 aaKnown RBP20.85■□□□□ 0.93
CNOT3-209ENST00000617930 ARID4AP29374 1257 aaPredicted RBP20.85■□□□□ 0.93
CNOT3-209ENST00000617930 RRAGDQ9NQL2 400 aaPredicted RBP20.85■□□□□ 0.93
CNOT3-209ENST00000617930 DEFB132Q7Z7B7 95 aa20.85■□□□□ 0.93
CNOT3-209ENST00000617930 ZSCAN31Q96LW9 406 aaPredicted RBP20.85■□□□□ 0.93
CNOT3-209ENST00000617930 SERPINB2P05120 415 aa20.84■□□□□ 0.93
CNOT3-209ENST00000617930 SYT1P21579 422 aa20.84■□□□□ 0.93
CNOT3-209ENST00000617930 PRPF40AO75400 957 aaKnown RBP20.83■□□□□ 0.93
CNOT3-209ENST00000617930 CNBD1Q8NA66 436 aa20.83■□□□□ 0.93
CNOT3-209ENST00000617930 MPHOSPH8Q99549 860 aa20.83■□□□□ 0.93
CNOT3-209ENST00000617930 SH2B1Q9NRF2 756 aaPredicted RBP20.83■□□□□ 0.93
CNOT3-209ENST00000617930 GJB2P29033 226 aa20.83■□□□□ 0.92
CNOT3-209ENST00000617930 CHRNDQ07001 517 aa20.83■□□□□ 0.92
CNOT3-209ENST00000617930 NLRP3Q96P20 1036 aa20.83■□□□□ 0.92
CNOT3-209ENST00000617930 LRRC2Q9BYS8 371 aa20.83■□□□□ 0.92
CNOT3-209ENST00000617930 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.83■□□□□ 0.92
CNOT3-209ENST00000617930 ANKRD31Q8N7Z5 1873 aa20.83■□□□□ 0.92
CNOT3-209ENST00000617930 HSP90B1P14625 803 aaKnown RBP20.82■□□□□ 0.92
CNOT3-209ENST00000617930 IGHMBP2P38935 993 aaKnown RBP20.82■□□□□ 0.92
CNOT3-209ENST00000617930 KRT32Q14532 448 aa20.82■□□□□ 0.92
CNOT3-209ENST00000617930 WASHC4Q2M389 1173 aa20.82■□□□□ 0.92
CNOT3-209ENST00000617930 APPBP2Q92624 585 aa20.82■□□□□ 0.92
CNOT3-209ENST00000617930 NRXN2Q9P2S2 1712 aa20.82■□□□□ 0.92
CNOT3-209ENST00000617930 ADD2P35612 726 aa20.82■□□□□ 0.92
CNOT3-209ENST00000617930 FOXD4L6Q3SYB3 417 aaPredicted RBP20.82■□□□□ 0.92
CNOT3-209ENST00000617930 FOXD4L3Q6VB84 417 aaPredicted RBP20.82■□□□□ 0.92
CNOT3-209ENST00000617930 GPT2Q8TD30 523 aa20.82■□□□□ 0.92
CNOT3-209ENST00000617930 NSFL1CQ9UNZ2 370 aaKnown RBP20.82■□□□□ 0.92
CNOT3-209ENST00000617930 SMC3Q9UQE7 1217 aa20.82■□□□□ 0.92
CNOT3-209ENST00000617930 ZFYP08048 801 aaPredicted RBP20.81■□□□□ 0.92
CNOT3-209ENST00000617930 RASGRF1Q13972 1273 aa20.81■□□□□ 0.92
CNOT3-209ENST00000617930 KLHL40Q2TBA0 621 aa20.81■□□□□ 0.92
CNOT3-209ENST00000617930 GAS2L3Q86XJ1 694 aa20.81■□□□□ 0.92
CNOT3-209ENST00000617930 MYO5AQ9Y4I1 1855 aaKnown RBP20.8■□□□□ 0.92
CNOT3-209ENST00000617930 E7EWF7 191 aa20.8■□□□□ 0.92
CNOT3-209ENST00000617930 BCAMP50895 628 aa20.8■□□□□ 0.92
CNOT3-209ENST00000617930 EXOSC10Q01780 885 aaKnown RBP20.8■□□□□ 0.92
CNOT3-209ENST00000617930 Q6ZUG5 572 aa20.8■□□□□ 0.92
CNOT3-209ENST00000617930 ANKRD18AQ8IVF6 992 aa20.8■□□□□ 0.92
CNOT3-209ENST00000617930 CDC5LQ99459 802 aaKnown RBP20.8■□□□□ 0.92
CNOT3-209ENST00000617930 WWC3Q9ULE0 1092 aa20.8■□□□□ 0.92
CNOT3-209ENST00000617930 DDX49Q9Y6V7 483 aaKnown RBP20.8■□□□□ 0.92
CNOT3-209ENST00000617930 STX6O43752 255 aa20.8■□□□□ 0.92
CNOT3-209ENST00000617930 SLC9C2Q5TAH2 1124 aa20.8■□□□□ 0.92
CNOT3-209ENST00000617930 MSL1Q68DK7 614 aa20.8■□□□□ 0.92
CNOT3-209ENST00000617930 PDGFDQ9GZP0 370 aaPredicted RBP20.8■□□□□ 0.92
CNOT3-209ENST00000617930 MINPP1Q9UNW1 487 aa20.8■□□□□ 0.92
CNOT3-209ENST00000617930 WDR33Q9C0J8 1336 aaKnown RBP20.79■□□□□ 0.92
CNOT3-209ENST00000617930 TCRBV5S4A2TA0A5A2 114 aa20.79■□□□□ 0.92
CNOT3-209ENST00000617930 FGAP02671 866 aa20.79■□□□□ 0.92
CNOT3-209ENST00000617930 BSDC1Q9NW68 430 aaPredicted RBP20.79■□□□□ 0.92
CNOT3-209ENST00000617930 GPAA1O43292 621 aa20.78■□□□□ 0.92
CNOT3-209ENST00000617930 ZSCAN22P10073 491 aaPredicted RBP20.78■□□□□ 0.92
CNOT3-209ENST00000617930 SLC5A1P13866 664 aa20.78■□□□□ 0.92
CNOT3-209ENST00000617930 STK3Q13188 491 aa20.78■□□□□ 0.92
CNOT3-209ENST00000617930 ANKRD1Q15327 319 aa20.78■□□□□ 0.92
CNOT3-209ENST00000617930 SPATA5Q8NB90 893 aa20.78■□□□□ 0.92
CNOT3-209ENST00000617930 SLC15A2Q16348 729 aa20.78■□□□□ 0.92
CNOT3-209ENST00000617930 GDPD2Q9HCC8 539 aa20.78■□□□□ 0.92
CNOT3-209ENST00000617930 MTMR6Q9Y217 621 aa20.78■□□□□ 0.92
CNOT3-209ENST00000617930 NPHP1O15259 732 aa20.77■□□□□ 0.92
CNOT3-209ENST00000617930 IDH1O75874 414 aaKnown RBP20.77■□□□□ 0.92
CNOT3-209ENST00000617930 UQCRFS1P1P0C7P4 283 aa20.77■□□□□ 0.92
CNOT3-209ENST00000617930 RPS8P62241 208 aaKnown RBP20.77■□□□□ 0.92
CNOT3-209ENST00000617930 DHX32Q7L7V1 743 aaKnown RBP20.77■□□□□ 0.92
CNOT3-209ENST00000617930 NKX2-3Q8TAU0 364 aa20.77■□□□□ 0.92
CNOT3-209ENST00000617930 ZNF532Q9HCE3 1301 aa20.77■□□□□ 0.92
CNOT3-209ENST00000617930 PDE6AP16499 860 aa20.77■□□□□ 0.91
CNOT3-209ENST00000617930 KLRK1P26718 216 aa20.77■□□□□ 0.91
CNOT3-209ENST00000617930 HAND2P61296 217 aa20.77■□□□□ 0.91
CNOT3-209ENST00000617930 CRY2Q49AN0 593 aa20.77■□□□□ 0.91
CNOT3-209ENST00000617930 CHST3Q7LGC8 479 aa20.77■□□□□ 0.91
CNOT3-209ENST00000617930 BRF1Q92994 677 aa20.77■□□□□ 0.91
CNOT3-209ENST00000617930 LRRFIP1Q32MZ4 808 aaKnown RBP20.76■□□□□ 0.91
CNOT3-209ENST00000617930 ILDR1Q86SU0 546 aaPredicted RBP20.76■□□□□ 0.91
CNOT3-209ENST00000617930 AGXT2Q9BYV1 514 aa20.76■□□□□ 0.91
CNOT3-209ENST00000617930 NBPF3Q9H094 633 aa20.76■□□□□ 0.91
CNOT3-209ENST00000617930 TTF1Q15361 905 aaPredicted RBP20.75■□□□□ 0.91
CNOT3-209ENST00000617930 UBE3CQ15386 1083 aa20.75■□□□□ 0.91
CNOT3-209ENST00000617930 QSER1Q2KHR3 1735 aa20.75■□□□□ 0.91
CNOT3-209ENST00000617930 LAMA4Q16363 1823 aa20.75■□□□□ 0.91
CNOT3-209ENST00000617930 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.75■□□□□ 0.91
CNOT3-209ENST00000617930 GPHNQ9NQX3 736 aaPredicted RBP20.75■□□□□ 0.91
CNOT3-209ENST00000617930 RBM27Q9P2N5 1060 aaKnown RBP20.75■□□□□ 0.91
CNOT3-209ENST00000617930 DENND2AQ9ULE3 1009 aa20.75■□□□□ 0.91
CNOT3-209ENST00000617930 JAK2O60674 1132 aa20.74■□□□□ 0.91
CNOT3-209ENST00000617930 F13A1P00488 732 aa20.74■□□□□ 0.91
CNOT3-209ENST00000617930 MMP10P09238 476 aa20.74■□□□□ 0.91
CNOT3-209ENST00000617930 GTF3C6Q969F1 213 aa20.74■□□□□ 0.91
CNOT3-209ENST00000617930 COL11A2P13942 1736 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms