RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 DCAF8Q5TAQ9 597 aa24.72■■□□□ 1.55
SDHA-220ENST00000617470 CWC27Q6UX04 472 aaKnown RBP24.72■■□□□ 1.55
SDHA-220ENST00000617470 FAM84BQ96KN1 310 aaPredicted RBP24.72■■□□□ 1.55
SDHA-220ENST00000617470 PALD1Q9ULE6 856 aa24.72■■□□□ 1.55
SDHA-220ENST00000617470 MED23Q9ULK4 1368 aa24.72■■□□□ 1.55
SDHA-220ENST00000617470 PPIP5K2O43314 1243 aa24.71■■□□□ 1.55
SDHA-220ENST00000617470 TTC39AQ5SRH9 613 aa24.71■■□□□ 1.55
SDHA-220ENST00000617470 CCDC102BQ68D86 513 aa24.71■■□□□ 1.55
SDHA-220ENST00000617470 HIBADHP31937 336 aaKnown RBP24.71■■□□□ 1.55
SDHA-220ENST00000617470 PHKA1P46020 1223 aa24.71■■□□□ 1.55
SDHA-220ENST00000617470 ZNF804AQ7Z570 1209 aa24.71■■□□□ 1.55
SDHA-220ENST00000617470 EPB41L2O43491 1005 aaKnown RBP24.7■■□□□ 1.54
SDHA-220ENST00000617470 DOK7Q18PE1 504 aa24.7■■□□□ 1.54
SDHA-220ENST00000617470 IL17RAQ96F46 866 aa24.7■■□□□ 1.54
SDHA-220ENST00000617470 LSG1Q9H089 658 aaKnown RBP24.7■■□□□ 1.54
SDHA-220ENST00000617470 IQSEC3Q9UPP2 1182 aaPredicted RBP24.7■■□□□ 1.54
SDHA-220ENST00000617470 C15orf52Q6ZUT6 534 aaKnown RBP24.69■■□□□ 1.54
SDHA-220ENST00000617470 IRS2Q9Y4H2 1338 aa24.69■■□□□ 1.54
SDHA-220ENST00000617470 FRAT2O75474 233 aaPredicted RBP24.69■■□□□ 1.54
SDHA-220ENST00000617470 LARGE2Q8N3Y3 721 aa24.69■■□□□ 1.54
SDHA-220ENST00000617470 EDC3Q96F86 508 aaKnown RBP24.69■■□□□ 1.54
SDHA-220ENST00000617470 DIAPH3Q9NSV4 1193 aa24.69■■□□□ 1.54
SDHA-220ENST00000617470 FER1L6Q2WGJ9 1857 aa24.68■■□□□ 1.54
SDHA-220ENST00000617470 K7ELQ4 463 aaPredicted RBP24.68■■□□□ 1.54
SDHA-220ENST00000617470 KIAA2012Q0VF49 1180 aa24.68■■□□□ 1.54
SDHA-220ENST00000617470 GNL3LQ9NVN8 582 aaKnown RBP24.68■■□□□ 1.54
SDHA-220ENST00000617470 RAD50Q92878 1312 aa24.67■■□□□ 1.54
SDHA-220ENST00000617470 ARAP2Q8WZ64 1704 aa24.67■■□□□ 1.54
SDHA-220ENST00000617470 IARSP41252 1262 aaKnown RBP24.67■■□□□ 1.54
SDHA-220ENST00000617470 FBXO33Q7Z6M2 555 aa24.67■■□□□ 1.54
SDHA-220ENST00000617470 DBNDD1Q9H9R9 158 aa24.67■■□□□ 1.54
SDHA-220ENST00000617470 UTRNP46939 3433 aa24.67■■□□□ 1.54
SDHA-220ENST00000617470 DDIT3P35638 169 aa24.67■■□□□ 1.54
SDHA-220ENST00000617470 HSPA4P34932 840 aa24.66■■□□□ 1.54
SDHA-220ENST00000617470 NDUFB9Q9Y6M9 179 aa24.66■■□□□ 1.54
SDHA-220ENST00000617470 LTBP3Q9NS15 1303 aa24.66■■□□□ 1.54
SDHA-220ENST00000617470 ANAPC15P60006 121 aa24.65■■□□□ 1.54
SDHA-220ENST00000617470 FAM227BQ96M60 508 aa24.65■■□□□ 1.54
SDHA-220ENST00000617470 HAUS7Q99871 368 aa24.65■■□□□ 1.54
SDHA-220ENST00000617470 GRIN3BO60391 1043 aa24.65■■□□□ 1.54
SDHA-220ENST00000617470 UQCRFS1P1P0C7P4 283 aa24.65■■□□□ 1.54
SDHA-220ENST00000617470 NFKBIBQ15653 356 aa24.65■■□□□ 1.54
SDHA-220ENST00000617470 COA1Q9GZY4 146 aa24.65■■□□□ 1.54
SDHA-220ENST00000617470 CD209Q9NNX6 404 aa24.65■■□□□ 1.54
SDHA-220ENST00000617470 MCCP23508 829 aa24.64■■□□□ 1.54
SDHA-220ENST00000617470 NMIQ13287 307 aaPredicted RBP24.64■■□□□ 1.54
SDHA-220ENST00000617470 RUFY2Q8WXA3 655 aa24.64■■□□□ 1.54
SDHA-220ENST00000617470 VPS33BQ9H267 617 aa24.64■■□□□ 1.54
SDHA-220ENST00000617470 SNRKQ9NRH2 765 aa24.64■■□□□ 1.54
SDHA-220ENST00000617470 ECE2O60344 883 aa24.63■■□□□ 1.53
SDHA-220ENST00000617470 FSD1Q9BTV5 496 aa24.63■■□□□ 1.53
SDHA-220ENST00000617470 SCARF1Q14162 830 aa24.63■■□□□ 1.53
SDHA-220ENST00000617470 NIM1KQ8IY84 436 aa24.63■■□□□ 1.53
SDHA-220ENST00000617470 JDP2Q8WYK2 163 aa24.63■■□□□ 1.53
SDHA-220ENST00000617470 A0A0D9SFI3 127 aa24.62■■□□□ 1.53
SDHA-220ENST00000617470 HIP1O00291 1037 aa24.62■■□□□ 1.53
SDHA-220ENST00000617470 ARID4AP29374 1257 aaPredicted RBP24.62■■□□□ 1.53
SDHA-220ENST00000617470 PTH1RQ03431 593 aa24.62■■□□□ 1.53
SDHA-220ENST00000617470 CHAF1AQ13111 956 aaPredicted RBP24.62■■□□□ 1.53
SDHA-220ENST00000617470 RASGRF1Q13972 1273 aa24.62■■□□□ 1.53
SDHA-220ENST00000617470 PI16Q6UXB8 463 aa24.62■■□□□ 1.53
SDHA-220ENST00000617470 FBXW7Q969H0 707 aa24.62■■□□□ 1.53
SDHA-220ENST00000617470 DNAJC2Q99543 621 aaKnown RBP24.62■■□□□ 1.53
SDHA-220ENST00000617470 JAG2Q9Y219 1238 aa24.62■■□□□ 1.53
SDHA-220ENST00000617470 MCAMP43121 646 aa24.62■■□□□ 1.53
SDHA-220ENST00000617470 PRELPP51888 382 aa24.62■■□□□ 1.53
SDHA-220ENST00000617470 DCAF8L1A6NGE4 600 aa24.61■■□□□ 1.53
SDHA-220ENST00000617470 LMNB1P20700 586 aa24.61■■□□□ 1.53
SDHA-220ENST00000617470 TDRD7Q8NHU6 1098 aaKnown RBP24.61■■□□□ 1.53
SDHA-220ENST00000617470 IL1R1P14778 569 aa24.6■■□□□ 1.53
SDHA-220ENST00000617470 ZNF512BQ96KM6 892 aaPredicted RBP24.6■■□□□ 1.53
SDHA-220ENST00000617470 KIAA1211Q6ZU35 1233 aa24.6■■□□□ 1.53
SDHA-220ENST00000617470 PODNQ7Z5L7 613 aa24.6■■□□□ 1.53
SDHA-220ENST00000617470 SPATA5Q8NB90 893 aa24.6■■□□□ 1.53
SDHA-220ENST00000617470 HMG20BQ9P0W2 317 aa24.6■■□□□ 1.53
SDHA-220ENST00000617470 DENND2AQ9ULE3 1009 aa24.6■■□□□ 1.53
SDHA-220ENST00000617470 ST18O60284 1047 aa24.59■■□□□ 1.53
SDHA-220ENST00000617470 RFX7Q2KHR2 1363 aa24.59■■□□□ 1.53
SDHA-220ENST00000617470 CHGBP05060 677 aa24.58■■□□□ 1.53
SDHA-220ENST00000617470 ZAP70P43403 619 aa24.58■■□□□ 1.53
SDHA-220ENST00000617470 NEK4P51957 841 aa24.58■■□□□ 1.53
SDHA-220ENST00000617470 RASEFQ8IZ41 740 aa24.58■■□□□ 1.53
SDHA-220ENST00000617470 KCNQ5Q9NR82 932 aa24.58■■□□□ 1.53
SDHA-220ENST00000617470 CHMP5Q9NZZ3 219 aa24.58■■□□□ 1.53
SDHA-220ENST00000617470 COL4A5P29400 1685 aa24.58■■□□□ 1.53
SDHA-220ENST00000617470 SEMA3EO15041 775 aa24.58■■□□□ 1.52
SDHA-220ENST00000617470 GTF2IP78347 998 aa24.58■■□□□ 1.52
SDHA-220ENST00000617470 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.58■■□□□ 1.52
SDHA-220ENST00000617470 RNF181Q9P0P0 153 aa24.58■■□□□ 1.52
SDHA-220ENST00000617470 SNX14Q9Y5W7 946 aa24.58■■□□□ 1.52
SDHA-220ENST00000617470 ZNRF3Q9ULT6 936 aa24.57■■□□□ 1.52
SDHA-220ENST00000617470 CCDC171Q6TFL3 1326 aa24.57■■□□□ 1.52
SDHA-220ENST00000617470 GOLIM4O00461 696 aa24.56■■□□□ 1.52
SDHA-220ENST00000617470 COL1A1P02452 1464 aaPredicted RBP24.56■■□□□ 1.52
SDHA-220ENST00000617470 YDJCA8MPS7 323 aa24.56■■□□□ 1.52
SDHA-220ENST00000617470 TTLL5Q6EMB2 1281 aa24.56■■□□□ 1.52
SDHA-220ENST00000617470 ZNF589Q86UQ0 364 aaPredicted RBP24.56■■□□□ 1.52
SDHA-220ENST00000617470 KBTBD3Q8NAB2 608 aa24.56■■□□□ 1.52
SDHA-220ENST00000617470 FOXD4L1Q9NU39 408 aa24.56■■□□□ 1.52
SDHA-220ENST00000617470 CCDC88AQ3V6T2 1871 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms