RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 CTCFP49711 727 aaPredicted RBP20.13■□□□□ 0.81
SPTSSB-204ENST00000617024 CXCL9Q07325 125 aa20.13■□□□□ 0.81
SPTSSB-204ENST00000617024 TNIP1Q15025 636 aa20.13■□□□□ 0.81
SPTSSB-204ENST00000617024 ERICH6BQ5W0A0 696 aa20.13■□□□□ 0.81
SPTSSB-204ENST00000617024 AACSQ86V21 672 aa20.13■□□□□ 0.81
SPTSSB-204ENST00000617024 EAF2Q96CJ1 260 aaPredicted RBP20.13■□□□□ 0.81
SPTSSB-204ENST00000617024 CCDC8Q9H0W5 538 aaPredicted RBP20.13■□□□□ 0.81
SPTSSB-204ENST00000617024 KCNQ5Q9NR82 932 aa20.13■□□□□ 0.81
SPTSSB-204ENST00000617024 GNL3LQ9NVN8 582 aaKnown RBP20.13■□□□□ 0.81
SPTSSB-204ENST00000617024 WBP1LQ9NX94 342 aa20.13■□□□□ 0.81
SPTSSB-204ENST00000617024 COL4A5P29400 1685 aa20.13■□□□□ 0.81
SPTSSB-204ENST00000617024 ZNF541Q9H0D2 1346 aa20.12■□□□□ 0.81
SPTSSB-204ENST00000617024 SMARCA5O60264 1052 aaPredicted RBP20.12■□□□□ 0.81
SPTSSB-204ENST00000617024 FRAT2O75474 233 aaPredicted RBP20.12■□□□□ 0.81
SPTSSB-204ENST00000617024 RAD17O75943 681 aa20.12■□□□□ 0.81
SPTSSB-204ENST00000617024 ANKRD45Q5TZF3 282 aa20.12■□□□□ 0.81
SPTSSB-204ENST00000617024 CIAPIN1Q6FI81 312 aa20.12■□□□□ 0.81
SPTSSB-204ENST00000617024 TDRD7Q8NHU6 1098 aaKnown RBP20.12■□□□□ 0.81
SPTSSB-204ENST00000617024 IQCA1LA6NCM1 817 aa20.11■□□□□ 0.81
SPTSSB-204ENST00000617024 USP17L3A6NCW0 530 aa20.11■□□□□ 0.81
SPTSSB-204ENST00000617024 USP17L4A6NCW7 530 aa20.11■□□□□ 0.81
SPTSSB-204ENST00000617024 TMEM88BA6NKF7 163 aa20.11■□□□□ 0.81
SPTSSB-204ENST00000617024 IFIT2P09913 472 aaKnown RBP20.11■□□□□ 0.81
SPTSSB-204ENST00000617024 LBX1P52954 281 aa20.11■□□□□ 0.81
SPTSSB-204ENST00000617024 TTLL5Q6EMB2 1281 aa20.11■□□□□ 0.81
SPTSSB-204ENST00000617024 USP17L1Q7RTZ2 530 aa20.11■□□□□ 0.81
SPTSSB-204ENST00000617024 ZNF609O15014 1411 aa20.1■□□□□ 0.81
SPTSSB-204ENST00000617024 SLC34A2O95436 690 aa20.1■□□□□ 0.81
SPTSSB-204ENST00000617024 PHKA1P46020 1223 aa20.1■□□□□ 0.81
SPTSSB-204ENST00000617024 CCDC158Q5M9N0 1113 aa20.1■□□□□ 0.81
SPTSSB-204ENST00000617024 CCDC102BQ68D86 513 aa20.1■□□□□ 0.81
SPTSSB-204ENST00000617024 SMC5Q8IY18 1101 aa20.1■□□□□ 0.81
SPTSSB-204ENST00000617024 DBNDD2Q9BQY9 259 aa20.1■□□□□ 0.81
SPTSSB-204ENST00000617024 GJA3Q9Y6H8 435 aa20.1■□□□□ 0.81
SPTSSB-204ENST00000617024 PSMD14O00487 310 aa20.09■□□□□ 0.81
SPTSSB-204ENST00000617024 GTF2IP78347 998 aa20.09■□□□□ 0.81
SPTSSB-204ENST00000617024 GPC2Q8N158 579 aa20.09■□□□□ 0.81
SPTSSB-204ENST00000617024 FBXW7Q969H0 707 aa20.09■□□□□ 0.81
SPTSSB-204ENST00000617024 AIDAQ96BJ3 306 aa20.09■□□□□ 0.81
SPTSSB-204ENST00000617024 IQSEC3Q9UPP2 1182 aaPredicted RBP20.09■□□□□ 0.81
SPTSSB-204ENST00000617024 VIL1P09327 827 aaKnown RBP20.08■□□□□ 0.81
SPTSSB-204ENST00000617024 HSPA8P11142 646 aaKnown RBP20.08■□□□□ 0.81
SPTSSB-204ENST00000617024 EAPPQ56P03 285 aaPredicted RBP20.08■□□□□ 0.81
SPTSSB-204ENST00000617024 STRIP1Q5VSL9 837 aa20.08■□□□□ 0.81
SPTSSB-204ENST00000617024 B4GALNT3Q6L9W6 998 aa20.08■□□□□ 0.81
SPTSSB-204ENST00000617024 DBNLQ9UJU6 430 aaKnown RBP20.08■□□□□ 0.81
SPTSSB-204ENST00000617024 UQCRFS1P1P0C7P4 283 aa20.07■□□□□ 0.8
SPTSSB-204ENST00000617024 TTC39AQ5SRH9 613 aa20.07■□□□□ 0.8
SPTSSB-204ENST00000617024 TLR7Q9NYK1 1049 aaKnown RBP20.07■□□□□ 0.8
SPTSSB-204ENST00000617024 DENND2AQ9ULE3 1009 aa20.07■□□□□ 0.8
SPTSSB-204ENST00000617024 RASSF10A6NK89 507 aa20.06■□□□□ 0.8
SPTSSB-204ENST00000617024 SEMA3EO15041 775 aa20.06■□□□□ 0.8
SPTSSB-204ENST00000617024 CCDC136Q96JN2 1154 aa20.06■□□□□ 0.8
SPTSSB-204ENST00000617024 FAM205AQ6ZU69 1335 aa20.05■□□□□ 0.8
SPTSSB-204ENST00000617024 ZBTB22O15209 634 aa20.05■□□□□ 0.8
SPTSSB-204ENST00000617024 CHAF1AQ13111 956 aaPredicted RBP20.05■□□□□ 0.8
SPTSSB-204ENST00000617024 MAP1SQ66K74 1059 aaPredicted RBP20.05■□□□□ 0.8
SPTSSB-204ENST00000617024 RSBN1LQ6PCB5 846 aaPredicted RBP20.05■□□□□ 0.8
SPTSSB-204ENST00000617024 ABHD8Q96I13 439 aa20.05■□□□□ 0.8
SPTSSB-204ENST00000617024 HACL1Q9UJ83 578 aa20.05■□□□□ 0.8
SPTSSB-204ENST00000617024 THSD7BQ9C0I4 1608 aa20.05■□□□□ 0.8
SPTSSB-204ENST00000617024 ARID4AP29374 1257 aaPredicted RBP20.04■□□□□ 0.8
SPTSSB-204ENST00000617024 EPHX2P34913 555 aa20.04■□□□□ 0.8
SPTSSB-204ENST00000617024 FKBP1AP62942 108 aaKnown RBP20.04■□□□□ 0.8
SPTSSB-204ENST00000617024 NUCB1Q02818 461 aa20.04■□□□□ 0.8
SPTSSB-204ENST00000617024 DACT2Q5SW24 774 aa20.04■□□□□ 0.8
SPTSSB-204ENST00000617024 ZNF512BQ96KM6 892 aaPredicted RBP20.04■□□□□ 0.8
SPTSSB-204ENST00000617024 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
SPTSSB-204ENST00000617024 JAG2Q9Y219 1238 aa20.04■□□□□ 0.8
SPTSSB-204ENST00000617024 CLEC11AQ9Y240 323 aa20.04■□□□□ 0.8
SPTSSB-204ENST00000617024 ARAP2Q8WZ64 1704 aa20.04■□□□□ 0.8
SPTSSB-204ENST00000617024 SCN9AQ15858 1988 aa20.03■□□□□ 0.8
SPTSSB-204ENST00000617024 RPS12P25398 132 aaKnown RBP20.03■□□□□ 0.8
SPTSSB-204ENST00000617024 GMPSP49915 693 aaPredicted RBP20.03■□□□□ 0.8
SPTSSB-204ENST00000617024 DEFB115Q30KQ5 88 aa20.03■□□□□ 0.8
SPTSSB-204ENST00000617024 CHD1LQ86WJ1 897 aa20.03■□□□□ 0.8
SPTSSB-204ENST00000617024 CNTROBQ8N137 903 aa20.03■□□□□ 0.8
SPTSSB-204ENST00000617024 AGBL3Q8NEM8 1001 aa20.03■□□□□ 0.8
SPTSSB-204ENST00000617024 WDR66Q8TBY9 1149 aa20.03■□□□□ 0.8
SPTSSB-204ENST00000617024 TBC1D22AQ8WUA7 517 aa20.03■□□□□ 0.8
SPTSSB-204ENST00000617024 ZBTB12Q9Y330 459 aaPredicted RBP20.03■□□□□ 0.8
SPTSSB-204ENST00000617024 RASGRF1Q13972 1273 aa20.02■□□□□ 0.8
SPTSSB-204ENST00000617024 SPATA5Q8NB90 893 aa20.02■□□□□ 0.8
SPTSSB-204ENST00000617024 DPF2Q92785 391 aa20.02■□□□□ 0.8
SPTSSB-204ENST00000617024 GPATCH3Q96I76 525 aa20.02■□□□□ 0.8
SPTSSB-204ENST00000617024 MXD3Q9BW11 206 aa20.02■□□□□ 0.8
SPTSSB-204ENST00000617024 LNPKQ9C0E8 428 aa20.02■□□□□ 0.8
SPTSSB-204ENST00000617024 TNRC18O15417 2968 aaPredicted RBP20.02■□□□□ 0.8
SPTSSB-204ENST00000617024 MYO3BQ8WXR4 1341 aa20.02■□□□□ 0.79
SPTSSB-204ENST00000617024 WDR33Q9C0J8 1336 aaKnown RBP20.02■□□□□ 0.79
SPTSSB-204ENST00000617024 MFSD14BQ5SR56 506 aa20.01■□□□□ 0.79
SPTSSB-204ENST00000617024 CENPQQ7L2Z9 268 aaPredicted RBP20.01■□□□□ 0.79
SPTSSB-204ENST00000617024 HMG20BQ9P0W2 317 aa20.01■□□□□ 0.79
SPTSSB-204ENST00000617024 PDS5AQ29RF7 1337 aaKnown RBP20.01■□□□□ 0.79
SPTSSB-204ENST00000617024 LMOD1P29536 600 aaPredicted RBP20■□□□□ 0.79
SPTSSB-204ENST00000617024 MCAMP43121 646 aa20■□□□□ 0.79
SPTSSB-204ENST00000617024 FMR1Q06787 632 aaKnown RBP eCLIP20■□□□□ 0.79
SPTSSB-204ENST00000617024 GMLQ99445 158 aa20■□□□□ 0.79
SPTSSB-204ENST00000617024 ECHDC1Q9NTX5 307 aa20■□□□□ 0.79
SPTSSB-204ENST00000617024 CNOT7Q9UIV1 285 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms