RNA–Protein interactions for RNA: ENST00000616760.1

CLIC1-210, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIC1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-210ENST00000616760 FOXN1O15353 648 aa12.53□□□□□ -0.4
CLIC1-210ENST00000616760 ANXA1P04083 346 aa12.53□□□□□ -0.4
CLIC1-210ENST00000616760 LMOD1P29536 600 aaPredicted RBP12.53□□□□□ -0.4
CLIC1-210ENST00000616760 EIF6P56537 245 aaKnown RBP12.53□□□□□ -0.4
CLIC1-210ENST00000616760 KRT24Q2M2I5 525 aa12.53□□□□□ -0.4
CLIC1-210ENST00000616760 PROSER3Q2NL68 480 aa12.53□□□□□ -0.4
CLIC1-210ENST00000616760 CRY2Q49AN0 593 aa12.53□□□□□ -0.4
CLIC1-210ENST00000616760 COPS6Q7L5N1 327 aa12.53□□□□□ -0.4
CLIC1-210ENST00000616760 LRP10Q7Z4F1 713 aa12.53□□□□□ -0.4
CLIC1-210ENST00000616760 SYNE4Q8N205 404 aa12.53□□□□□ -0.4
CLIC1-210ENST00000616760 XAGE3Q8WTP9 111 aa12.53□□□□□ -0.4
CLIC1-210ENST00000616760 RPGRQ92834 1020 aaKnown RBP12.53□□□□□ -0.4
CLIC1-210ENST00000616760 CHMP4AQ9BY43 222 aa12.53□□□□□ -0.4
CLIC1-210ENST00000616760 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.53□□□□□ -0.4
CLIC1-210ENST00000616760 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
CLIC1-210ENST00000616760 RNF123Q5XPI4 1314 aa12.53□□□□□ -0.4
CLIC1-210ENST00000616760 ZNF853P0CG23 659 aa12.52□□□□□ -0.41
CLIC1-210ENST00000616760 VEGFBP49765 207 aa12.52□□□□□ -0.41
CLIC1-210ENST00000616760 AIMP1Q12904 312 aaKnown RBP12.52□□□□□ -0.41
CLIC1-210ENST00000616760 SUSD4Q5VX71 490 aa12.52□□□□□ -0.41
CLIC1-210ENST00000616760 DUSP27Q5VZP5 1158 aa12.52□□□□□ -0.41
CLIC1-210ENST00000616760 NUTM1Q86Y26 1132 aa12.52□□□□□ -0.41
CLIC1-210ENST00000616760 PARP9Q8IXQ6 854 aa12.52□□□□□ -0.41
CLIC1-210ENST00000616760 CNTROBQ8N137 903 aa12.52□□□□□ -0.41
CLIC1-210ENST00000616760 TMX4Q9H1E5 349 aaPredicted RBP12.52□□□□□ -0.41
CLIC1-210ENST00000616760 CHPF2Q9P2E5 772 aa12.52□□□□□ -0.41
CLIC1-210ENST00000616760 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
CLIC1-210ENST00000616760 SLC27A5Q9Y2P5 690 aa12.52□□□□□ -0.41
CLIC1-210ENST00000616760 UBN2Q6ZU65 1347 aa12.52□□□□□ -0.41
CLIC1-210ENST00000616760 ABCC12Q96J65 1359 aa12.52□□□□□ -0.41
CLIC1-210ENST00000616760 SNED1Q8TER0 1413 aa12.52□□□□□ -0.41
CLIC1-210ENST00000616760 RASSF10A6NK89 507 aa12.51□□□□□ -0.41
CLIC1-210ENST00000616760 NTSR2O95665 410 aa12.51□□□□□ -0.41
CLIC1-210ENST00000616760 ADH1BP00325 375 aa12.51□□□□□ -0.41
CLIC1-210ENST00000616760 GGCXP38435 758 aa12.51□□□□□ -0.41
CLIC1-210ENST00000616760 MAP2K1Q02750 393 aaPredicted RBP12.51□□□□□ -0.41
CLIC1-210ENST00000616760 UTP14AQ9BVJ6 771 aaKnown RBP12.51□□□□□ -0.41
CLIC1-210ENST00000616760 HYPKQ9NX55 129 aa12.51□□□□□ -0.41
CLIC1-210ENST00000616760 USP46P62068 366 aa12.5□□□□□ -0.41
CLIC1-210ENST00000616760 DEFB115Q30KQ5 88 aa12.5□□□□□ -0.41
CLIC1-210ENST00000616760 OLFM4Q6UX06 510 aa12.5□□□□□ -0.41
CLIC1-210ENST00000616760 RBM17Q96I25 401 aaKnown RBP12.5□□□□□ -0.41
CLIC1-210ENST00000616760 ABT1Q9ULW3 272 aaKnown RBP12.5□□□□□ -0.41
CLIC1-210ENST00000616760 LTBP1Q14766 1721 aa12.5□□□□□ -0.41
CLIC1-210ENST00000616760 LAMB2P55268 1798 aa12.5□□□□□ -0.41
CLIC1-210ENST00000616760 HOXA10P31260 410 aaPredicted RBP12.49□□□□□ -0.41
CLIC1-210ENST00000616760 PDE4DQ08499 809 aa12.49□□□□□ -0.41
CLIC1-210ENST00000616760 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
CLIC1-210ENST00000616760 MAP1SQ66K74 1059 aaPredicted RBP12.49□□□□□ -0.41
CLIC1-210ENST00000616760 LARGE2Q8N3Y3 721 aa12.49□□□□□ -0.41
CLIC1-210ENST00000616760 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.49□□□□□ -0.41
CLIC1-210ENST00000616760 PLBD2Q8NHP8 589 aa12.49□□□□□ -0.41
CLIC1-210ENST00000616760 NLRP3Q96P20 1036 aa12.49□□□□□ -0.41
CLIC1-210ENST00000616760 CRAMP1Q96RY5 1269 aa12.49□□□□□ -0.41
CLIC1-210ENST00000616760 SPSB2Q99619 263 aa12.49□□□□□ -0.41
CLIC1-210ENST00000616760 PPP4R2Q9NY27 417 aa12.49□□□□□ -0.41
CLIC1-210ENST00000616760 GJA3Q9Y6H8 435 aa12.49□□□□□ -0.41
CLIC1-210ENST00000616760 E9PSI1 815 aa12.48□□□□□ -0.41
CLIC1-210ENST00000616760 PPEF1O14829 653 aaPredicted RBP12.48□□□□□ -0.41
CLIC1-210ENST00000616760 ECE1P42892 770 aa12.48□□□□□ -0.41
CLIC1-210ENST00000616760 CCDC27Q2M243 656 aa12.48□□□□□ -0.41
CLIC1-210ENST00000616760 NLRP10Q86W26 655 aa12.48□□□□□ -0.41
CLIC1-210ENST00000616760 NIM1KQ8IY84 436 aa12.48□□□□□ -0.41
CLIC1-210ENST00000616760 THAP11Q96EK4 314 aa12.48□□□□□ -0.41
CLIC1-210ENST00000616760 BEGAINQ9BUH8 593 aa12.48□□□□□ -0.41
CLIC1-210ENST00000616760 VPS33BQ9H267 617 aa12.48□□□□□ -0.41
CLIC1-210ENST00000616760 RCAN3Q9UKA8 241 aa12.48□□□□□ -0.41
CLIC1-210ENST00000616760 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
CLIC1-210ENST00000616760 COL4A5P29400 1685 aa12.48□□□□□ -0.41
CLIC1-210ENST00000616760 SH3TC1Q8TE82 1336 aa12.47□□□□□ -0.41
CLIC1-210ENST00000616760 WDR33Q9C0J8 1336 aaKnown RBP12.47□□□□□ -0.41
CLIC1-210ENST00000616760 LBX1P52954 281 aa12.47□□□□□ -0.41
CLIC1-210ENST00000616760 SLC10A5Q5PT55 438 aa12.47□□□□□ -0.41
CLIC1-210ENST00000616760 USP50Q70EL3 339 aaPredicted RBP12.47□□□□□ -0.41
CLIC1-210ENST00000616760 TRMT112Q9UI30 125 aaKnown RBP12.47□□□□□ -0.41
CLIC1-210ENST00000616760 ELL2O00472 640 aaPredicted RBP12.46□□□□□ -0.41
CLIC1-210ENST00000616760 HOXA2O43364 376 aa12.46□□□□□ -0.41
CLIC1-210ENST00000616760 S1PR4O95977 384 aa12.46□□□□□ -0.41
CLIC1-210ENST00000616760 CCDC30Q5VVM6 783 aa12.46□□□□□ -0.41
CLIC1-210ENST00000616760 WDR63Q8IWG1 891 aa12.46□□□□□ -0.41
CLIC1-210ENST00000616760 WWC1Q8IX03 1113 aa12.46□□□□□ -0.41
CLIC1-210ENST00000616760 SUPT20HQ8NEM7 779 aa12.46□□□□□ -0.41
CLIC1-210ENST00000616760 IL16Q14005 1332 aa12.45□□□□□ -0.42
CLIC1-210ENST00000616760 PPIP5K2O43314 1243 aa12.45□□□□□ -0.42
CLIC1-210ENST00000616760 FMNL1O95466 1100 aaPredicted RBP12.45□□□□□ -0.42
CLIC1-210ENST00000616760 DDX58O95786 925 aaKnown RBP12.45□□□□□ -0.42
CLIC1-210ENST00000616760 SCNN1DP51172 638 aa12.45□□□□□ -0.42
CLIC1-210ENST00000616760 BRICD5Q6PL45 260 aa12.45□□□□□ -0.42
CLIC1-210ENST00000616760 RIC3Q7Z5B4 369 aa12.45□□□□□ -0.42
CLIC1-210ENST00000616760 SLC6A16Q9GZN6 736 aa12.45□□□□□ -0.42
CLIC1-210ENST00000616760 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
CLIC1-210ENST00000616760 CDHR2Q9BYE9 1310 aa12.44□□□□□ -0.42
CLIC1-210ENST00000616760 RNF223E7ERA6 249 aa12.44□□□□□ -0.42
CLIC1-210ENST00000616760 HSPA8P11142 646 aaKnown RBP12.44□□□□□ -0.42
CLIC1-210ENST00000616760 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
CLIC1-210ENST00000616760 C8orf58Q8NAV2 365 aa12.44□□□□□ -0.42
CLIC1-210ENST00000616760 HLA-CQ95604 372 aa12.44□□□□□ -0.42
CLIC1-210ENST00000616760 CAPNS2Q96L46 248 aa12.44□□□□□ -0.42
CLIC1-210ENST00000616760 ISCA1Q9BUE6 129 aa12.44□□□□□ -0.42
CLIC1-210ENST00000616760 STK31Q9BXU1 1019 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms