RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 RBM10P98175 930 aaKnown RBP14.21□□□□□ -0.13
TCF4-248ENST00000616053 EHBP1Q8NDI1 1231 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 ATP2A3Q93084 1043 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 RRP36Q96EU6 259 aaKnown RBP14.21□□□□□ -0.13
TCF4-248ENST00000616053 KIF2AO00139 706 aaPredicted RBP14.21□□□□□ -0.13
TCF4-248ENST00000616053 CIB2O75838 187 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 GNAQP50148 359 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 SLC9A5Q14940 896 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 KANK3Q6NY19 840 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 SMIM23A6NLE4 172 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 TACC1O75410 805 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 SLC8A2Q9UPR5 921 aa14.21□□□□□ -0.13
TCF4-248ENST00000616053 ARHGEF10LQ9HCE6 1279 aa14.21□□□□□ -0.14
TCF4-248ENST00000616053 KIF1BPQ96EK5 621 aa14.21□□□□□ -0.14
TCF4-248ENST00000616053 MAP10Q9P2G4 905 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 MOSPD1Q9UJG1 213 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 FRMD4BQ9Y2L6 1034 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 FOXO3O43524 673 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 METAP2P50579 478 aaKnown RBP eCLIP14.2□□□□□ -0.14
TCF4-248ENST00000616053 KCNK9Q9NPC2 374 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 IQSEC3Q9UPP2 1182 aaPredicted RBP14.2□□□□□ -0.14
TCF4-248ENST00000616053 SYCE3A1L190 88 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 ANO6Q4KMQ2 910 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 AMOTL2Q9Y2J4 779 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 USP47Q96K76 1375 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 PRPF6O94906 941 aaKnown RBP14.2□□□□□ -0.14
TCF4-248ENST00000616053 CSRNP2Q9H175 543 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 BAG5Q9UL15 447 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 PPFIA3O75145 1194 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 NAA16Q6N069 864 aaPredicted RBP14.2□□□□□ -0.14
TCF4-248ENST00000616053 TPTE2Q6XPS3 522 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 HYPKQ9NX55 129 aa14.2□□□□□ -0.14
TCF4-248ENST00000616053 ASIC1P78348 528 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 PRPF40BQ6NWY9 871 aaKnown RBP14.19□□□□□ -0.14
TCF4-248ENST00000616053 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.19□□□□□ -0.14
TCF4-248ENST00000616053 LEO1Q8WVC0 666 aaPredicted RBP14.19□□□□□ -0.14
TCF4-248ENST00000616053 GOLGA8CPA6NN73 597 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 CTAGE5O15320 804 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 POMGNT1Q8WZA1 660 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 RBM17Q96I25 401 aaKnown RBP14.19□□□□□ -0.14
TCF4-248ENST00000616053 ZSCAN32Q9NX65 697 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 RABGAP1Q9Y3P9 1069 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 WTAPQ15007 396 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 ZYXQ15942 572 aaKnown RBP14.19□□□□□ -0.14
TCF4-248ENST00000616053 TMEM259Q4ZIN3 620 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 PNMA8AQ86V59 439 aaPredicted RBP14.19□□□□□ -0.14
TCF4-248ENST00000616053 PDE6BP35913 854 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 TNIKQ9UKE5 1360 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 N4BP3O15049 544 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 ZFYP08048 801 aaPredicted RBP14.19□□□□□ -0.14
TCF4-248ENST00000616053 DDB1Q16531 1140 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 SND1Q7KZF4 910 aaKnown RBP eCLIP14.19□□□□□ -0.14
TCF4-248ENST00000616053 FMNL3Q8IVF7 1028 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 METTL13Q8N6R0 699 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 USHBP1Q8N6Y0 703 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 WDR48Q8TAF3 677 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 NEK1Q96PY6 1258 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 PAGR1Q9BTK6 254 aa14.19□□□□□ -0.14
TCF4-248ENST00000616053 TRIM56Q9BRZ2 755 aaKnown RBP14.18□□□□□ -0.14
TCF4-248ENST00000616053 BCS1LQ9Y276 419 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 POTEB2H3BUK9 544 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 SH2D4BQ5SQS7 431 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 PDCD7Q8N8D1 485 aaKnown RBP14.18□□□□□ -0.14
TCF4-248ENST00000616053 SNRKQ9NRH2 765 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 DKC1O60832 514 aaKnown RBP eCLIP14.18□□□□□ -0.14
TCF4-248ENST00000616053 TCP11L2Q8N4U5 519 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 KIF18AQ8NI77 898 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 NIP7Q9Y221 180 aaKnown RBP eCLIP14.18□□□□□ -0.14
TCF4-248ENST00000616053 BZW2Q9Y6E2 419 aaKnown RBP14.18□□□□□ -0.14
TCF4-248ENST00000616053 HAUS8Q9BT25 410 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 CCDC68Q9H2F9 335 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 ZBED4O75132 1171 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 CCDC8Q9H0W5 538 aaPredicted RBP14.18□□□□□ -0.14
TCF4-248ENST00000616053 CETN3O15182 167 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 APOBRQ0VD83 1088 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 CALCOCO2Q13137 446 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 ANKRD35Q8N283 1001 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 SLITRK6Q9H5Y7 841 aa14.18□□□□□ -0.14
TCF4-248ENST00000616053 ZNF277Q9NRM2 450 aaPredicted RBP14.18□□□□□ -0.14
TCF4-248ENST00000616053 CAPN9O14815 690 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 PRPF38AQ8NAV1 312 aaKnown RBP14.17□□□□□ -0.14
TCF4-248ENST00000616053 TRAIPQ9BWF2 469 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 KRT79Q5XKE5 535 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 BAG1Q99933 345 aaPredicted RBP14.17□□□□□ -0.14
TCF4-248ENST00000616053 UQCRFS1P1P0C7P4 283 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 TTC22Q5TAA0 569 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 RRAGBQ5VZM2 374 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 NIM1KQ8IY84 436 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 HVCN1Q96D96 273 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 HAND2P61296 217 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 FASTKD5Q7L8L6 764 aaKnown RBP14.17□□□□□ -0.14
TCF4-248ENST00000616053 FNBP4Q8N3X1 1017 aaPredicted RBP14.17□□□□□ -0.14
TCF4-248ENST00000616053 H0YIN7 160 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 USP16Q9Y5T5 823 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 ZNF467Q7Z7K2 595 aaPredicted RBP14.17□□□□□ -0.14
TCF4-248ENST00000616053 STMN2Q93045 179 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 DCPSQ96C86 337 aaKnown RBP14.17□□□□□ -0.14
TCF4-248ENST00000616053 MIS18AQ9NYP9 233 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 MTUS1Q9ULD2 1270 aa14.17□□□□□ -0.14
TCF4-248ENST00000616053 PLEKHG3A1L390 1219 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms