RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 ZSCAN16Q9H4T2 348 aaPredicted RBP11.93□□□□□ -0.5
TNFAIP3-208ENST00000615468 ABCB6Q9NP58 842 aa11.93□□□□□ -0.5
TNFAIP3-208ENST00000615468 GLRX3O76003 335 aaKnown RBP11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 EBAG9O00559 213 aa11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 PPFIA4O75335 1185 aa11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 EIF5P55010 431 aaKnown RBP11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 USP28Q96RU2 1077 aa11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 CENPHQ9H3R5 247 aa11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 LRRC7Q96NW7 1537 aa11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 CCT5P48643 541 aa11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 CLASRPQ8N2M8 674 aaKnown RBP11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 GPATCH3Q96I76 525 aa11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 TM6SF1Q9BZW5 370 aa11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 FAM107BQ9H098 131 aa11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 SOS1Q07889 1333 aaPredicted RBP11.92□□□□□ -0.5
TNFAIP3-208ENST00000615468 AKAP17AQ02040 695 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 FLIIQ13045 1269 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 TSGA10IPQ3SY00 556 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 AFAP1L1Q8TED9 768 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 GDAP1L1Q96MZ0 367 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 KCND1Q9NSA2 647 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 A0A0G2JS52 829 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 CBFA2T2O43439 604 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 ATF3P18847 181 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 COL9A3Q14050 684 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 PI4K2BQ8TCG2 481 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 MRPS27Q92552 414 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 CEP89Q96ST8 783 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 MAP3K9P80192 1104 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 LRCH2Q5VUJ6 765 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 ERC1Q8IUD2 1116 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 SUGP1Q8IWZ8 645 aaKnown RBP11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 FAM227BQ96M60 508 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 BAG1Q99933 345 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 IRX2Q9BZI1 471 aaPredicted RBP11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 MRFAP1Q9Y605 127 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 KIAA0232Q92628 1395 aa11.91□□□□□ -0.5
TNFAIP3-208ENST00000615468 FSD1Q9BTV5 496 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 CPSF1Q10570 1443 aaKnown RBP11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 ATP7BP35670 1465 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 CHL1O00533 1208 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 ARHGAP6O43182 974 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 RESTQ13127 1097 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 CASP8Q14790 479 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 USP6P35125 1406 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 CCDC196A0A1B0GTZ2 297 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 VWA3AA6NCI4 1184 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 GOLGA6L9A6NEM1 432 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 SLC27A2O14975 620 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 FANCGO15287 622 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 ADKP55263 362 aaKnown RBP11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 CCT2P78371 535 aaKnown RBP11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 FAM71BQ8TC56 605 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 KIAA1468Q9P260 1216 aa11.9□□□□□ -0.5
TNFAIP3-208ENST00000615468 GOLIM4O00461 696 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 KIF1CO43896 1103 aaKnown RBP11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 HNRNPH1P31943 449 aaKnown RBP11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 SATB1Q01826 763 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 MTX1Q13505 466 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 CHRNA2Q15822 529 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 PLEKHO1Q53GL0 409 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 NBPF6Q5VWK0 638 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 NBPF4Q96M43 638 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 GBP3Q9H0R5 595 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 AATKQ6ZMQ8 1374 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 RNF40O75150 1001 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 INPP5BP32019 993 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 CPLX3Q8WVH0 158 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 IL17RAQ96F46 866 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 NLRP2Q9NX02 1062 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 AOX1Q06278 1338 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 ECM2O94769 699 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 BEND6Q5SZJ8 279 aaPredicted RBP11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 RSRC2Q7L4I2 434 aaKnown RBP11.89□□□□□ -0.51
TNFAIP3-208ENST00000615468 KIF5CO60282 957 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 POLR3DP05423 398 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 RPS6KB1P23443 525 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 HOXC9P31274 260 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 SWT1Q5T5J6 900 aaKnown RBP11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 SRGAP1Q7Z6B7 1085 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 DPF2Q92785 391 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 MAP2K7O14733 419 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 KIAA0754O94854 1291 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 NMIQ13287 307 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 MPRIPQ6WCQ1 1025 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 PNKPQ96T60 521 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 CAPN7Q9Y6W3 813 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 SHTN1A0MZ66 631 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 NEBLO76041 1014 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 ANXA1P04083 346 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 KCNJ6P48051 423 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 NDUFA8P51970 172 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 NECTIN1Q15223 517 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 ZNF569Q5MCW4 686 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 OLFM4Q6UX06 510 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 TOGARAM2Q6ZUX3 1019 aa11.88□□□□□ -0.51
TNFAIP3-208ENST00000615468 KRT28Q7Z3Y7 464 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms