RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 LOC102724428A0A0B4J2F2 783 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 VWA3AA6NCI4 1184 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 CHMP2AO43633 222 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 HMGB1P09429 215 aaKnown RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 SIK1P57059 783 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 ARHGAP29Q52LW3 1261 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 TEX11Q8IYF3 940 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 CCDC112Q8NEF3 446 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 NUP88Q99567 741 aaPredicted RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.37□□□□□ -1.71
LTN1-207ENST00000614971 GPHNQ9NQX3 736 aaPredicted RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 GINS2Q9Y248 185 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 UQCRFS1P1P0C7P4 283 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 ADD1P35611 737 aaKnown RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 USH1GQ495M9 461 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 TBC1D10BQ4KMP7 808 aaPredicted RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 AXDND1Q5T1B0 1012 aaPredicted RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 RUFY3Q7L099 469 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 KIAA1328Q86T90 577 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 GJB4Q9NTQ9 266 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 HIBADHP31937 336 aaKnown RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 HLFQ16534 295 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 LETM2Q2VYF4 491 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 BEND3Q5T5X7 828 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 FAM196AQ6ZSG2 479 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 ZNF589Q86UQ0 364 aaPredicted RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 WASF1Q92558 559 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 RTL1A6NKG5 1358 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 MYO9BQ13459 2157 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 CYP27B1O15528 508 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 LETM1O95202 739 aaPredicted RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 TOP1P11387 765 aaKnown RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 EPHA10Q5JZY3 1008 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 CCDC70Q6NSX1 233 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 DHX32Q7L7V1 743 aaKnown RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 ZNF526Q8TF50 670 aaPredicted RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 FTOQ9C0B1 505 aaKnown RBP eCLIP4.37□□□□□ -1.71
LTN1-207ENST00000614971 DBNLQ9UJU6 430 aaKnown RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 ERICH4A6NGS2 130 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 DDX39AO00148 427 aaKnown RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 SGSM2O43147 1006 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 EPB41L2O43491 1005 aaKnown RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 HLA-DOAP06340 250 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 CRKLP46109 303 aaKnown RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 MTIF2P46199 727 aaKnown RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 CCDC186Q7Z3E2 898 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 PIGBQ92521 554 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 SMARCC1Q92922 1105 aaPredicted RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 SMARCE1Q969G3 411 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 TRERF1Q96PN7 1200 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 RUFY1Q96T51 708 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 SPDYE4A6NLX3 237 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 USP17L12C9JPN9 530 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 USP17L21D6R901 530 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 IGSF3O75054 1194 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 UBE2HP62256 183 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 JAKMIP3Q5VZ66 844 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 CACNA2D4Q7Z3S7 1137 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 QTRT2Q9H974 415 aaKnown RBP4.37□□□□□ -1.71
LTN1-207ENST00000614971 ZNF287Q9HBT7 754 aa4.37□□□□□ -1.71
LTN1-207ENST00000614971 ZFYVE16Q7Z3T8 1539 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 DCAF8L1A6NGE4 600 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 DPH6Q7L8W6 267 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 CCDC191Q8NCU4 936 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 ANO10Q9NW15 660 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 VPS54Q9P1Q0 977 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 ABCA8O94911 1581 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 PRKAB2O43741 272 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 PDE8AO60658 829 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 RBM25P49756 843 aaKnown RBP4.36□□□□□ -1.71
LTN1-207ENST00000614971 TCIRG1Q13488 830 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 ME3Q16798 604 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 BCS1LQ9Y276 419 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 EIF2AK4Q9P2K8 1649 aaKnown RBP4.36□□□□□ -1.71
LTN1-207ENST00000614971 ERBB3P21860 1342 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 ZFYVE9O95405 1425 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 LDHCP07864 332 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 TEX35Q5T0J7 233 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 TCP11L1Q9NUJ3 509 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 TBC1D7Q9P0N9 293 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 PUF60Q9UHX1 559 aaKnown RBP4.36□□□□□ -1.71
LTN1-207ENST00000614971 ATF5Q9Y2D1 282 aaPredicted RBP4.36□□□□□ -1.71
LTN1-207ENST00000614971 CACNB3P54284 484 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 PUM3Q15397 648 aaKnown RBP4.36□□□□□ -1.71
LTN1-207ENST00000614971 CCDC181Q5TID7 509 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 CCDC102BQ68D86 513 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 PIK3AP1Q6ZUJ8 805 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 BRINP3Q76B58 766 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 ZNF804AQ7Z570 1209 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 ZSCAN30Q86W11 494 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 SPICE1Q8N0Z3 855 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 FAM212AQ96EL1 285 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 HARSP12081 509 aaKnown RBP4.36□□□□□ -1.71
LTN1-207ENST00000614971 CCT6AP40227 531 aaKnown RBP4.36□□□□□ -1.71
LTN1-207ENST00000614971 CBX1P83916 185 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 NKX1-1Q15270 411 aaPredicted RBP4.36□□□□□ -1.71
LTN1-207ENST00000614971 KLHL40Q2TBA0 621 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 RRAGBQ5VZM2 374 aa4.36□□□□□ -1.71
LTN1-207ENST00000614971 GOLGA4Q13439 2230 aaKnown RBP4.36□□□□□ -1.71
LTN1-207ENST00000614971 SPTLC2O15270 562 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms