RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 HAUS7Q99871 368 aa18.94■□□□□ 0.62
CCL3-206ENST00000614051 ZNF277Q9NRM2 450 aaPredicted RBP18.94■□□□□ 0.62
CCL3-206ENST00000614051 HMG20BQ9P0W2 317 aa18.94■□□□□ 0.62
CCL3-206ENST00000614051 TRIM6-TRIM34B2RNG4 842 aa18.93■□□□□ 0.62
CCL3-206ENST00000614051 ZAP70P43403 619 aa18.93■□□□□ 0.62
CCL3-206ENST00000614051 FKBP4Q02790 459 aaKnown RBP eCLIP18.93■□□□□ 0.62
CCL3-206ENST00000614051 AOC3Q16853 763 aa18.93■□□□□ 0.62
CCL3-206ENST00000614051 GRIPAP1Q4V328 841 aa18.93■□□□□ 0.62
CCL3-206ENST00000614051 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.93■□□□□ 0.62
CCL3-206ENST00000614051 RILPL2Q969X0 211 aa18.93■□□□□ 0.62
CCL3-206ENST00000614051 PSMD1Q99460 953 aa18.93■□□□□ 0.62
CCL3-206ENST00000614051 EYA3Q99504 573 aa18.93■□□□□ 0.62
CCL3-206ENST00000614051 GNL3LQ9NVN8 582 aaKnown RBP18.93■□□□□ 0.62
CCL3-206ENST00000614051 CCDC88AQ3V6T2 1871 aa18.93■□□□□ 0.62
CCL3-206ENST00000614051 NFKBIEO00221 500 aa18.92■□□□□ 0.62
CCL3-206ENST00000614051 SPATA5Q8NB90 893 aa18.92■□□□□ 0.62
CCL3-206ENST00000614051 SUPT20HQ8NEM7 779 aa18.92■□□□□ 0.62
CCL3-206ENST00000614051 ANTXR1Q9H6X2 564 aa18.92■□□□□ 0.62
CCL3-206ENST00000614051 CD209Q9NNX6 404 aa18.92■□□□□ 0.62
CCL3-206ENST00000614051 JAG2Q9Y219 1238 aa18.92■□□□□ 0.62
CCL3-206ENST00000614051 GOLIM4O00461 696 aa18.91■□□□□ 0.62
CCL3-206ENST00000614051 YBX3P16989 372 aaKnown RBP eCLIP18.91■□□□□ 0.62
CCL3-206ENST00000614051 C1QTNF8P60827 252 aa18.91■□□□□ 0.62
CCL3-206ENST00000614051 RASSF7Q02833 373 aa18.91■□□□□ 0.62
CCL3-206ENST00000614051 TDRD7Q8NHU6 1098 aaKnown RBP18.91■□□□□ 0.62
CCL3-206ENST00000614051 DBNDD1Q9H9R9 158 aa18.91■□□□□ 0.62
CCL3-206ENST00000614051 PAG1Q9NWQ8 432 aa18.91■□□□□ 0.62
CCL3-206ENST00000614051 COL4A5P29400 1685 aa18.91■□□□□ 0.62
CCL3-206ENST00000614051 PPIP5K2O43314 1243 aa18.9■□□□□ 0.62
CCL3-206ENST00000614051 FRAT2O75474 233 aaPredicted RBP18.9■□□□□ 0.62
CCL3-206ENST00000614051 KIAA2012Q0VF49 1180 aa18.9■□□□□ 0.62
CCL3-206ENST00000614051 CYP2E1P05181 493 aaPredicted RBP18.9■□□□□ 0.62
CCL3-206ENST00000614051 IL1R1P14778 569 aa18.9■□□□□ 0.62
CCL3-206ENST00000614051 CHAF1AQ13111 956 aaPredicted RBP18.9■□□□□ 0.62
CCL3-206ENST00000614051 TBC1D9Q6ZT07 1266 aa18.9■□□□□ 0.62
CCL3-206ENST00000614051 TAOK3Q9H2K8 898 aa18.9■□□□□ 0.62
CCL3-206ENST00000614051 SCN9AQ15858 1988 aa18.9■□□□□ 0.62
CCL3-206ENST00000614051 G3V3G9 751 aa18.89■□□□□ 0.61
CCL3-206ENST00000614051 DCAF8Q5TAQ9 597 aa18.89■□□□□ 0.61
CCL3-206ENST00000614051 ARHGAP27Q6ZUM4 889 aa18.89■□□□□ 0.61
CCL3-206ENST00000614051 CNTROBQ8N137 903 aa18.89■□□□□ 0.61
CCL3-206ENST00000614051 COA1Q9GZY4 146 aa18.89■□□□□ 0.61
CCL3-206ENST00000614051 PIH1D3Q9NQM4 214 aaKnown RBP18.89■□□□□ 0.61
CCL3-206ENST00000614051 KCNQ5Q9NR82 932 aa18.89■□□□□ 0.61
CCL3-206ENST00000614051 DENND2AQ9ULE3 1009 aa18.89■□□□□ 0.61
CCL3-206ENST00000614051 ECE2O60344 883 aa18.88■□□□□ 0.61
CCL3-206ENST00000614051 PRELPP51888 382 aa18.88■□□□□ 0.61
CCL3-206ENST00000614051 EVI5LQ96CN4 794 aa18.88■□□□□ 0.61
CCL3-206ENST00000614051 DOCK2Q92608 1830 aa18.88■□□□□ 0.61
CCL3-206ENST00000614051 MYH7P12883 1935 aa18.88■□□□□ 0.61
CCL3-206ENST00000614051 SEMA3EO15041 775 aa18.87■□□□□ 0.61
CCL3-206ENST00000614051 IARSP41252 1262 aaKnown RBP18.87■□□□□ 0.61
CCL3-206ENST00000614051 LARGE2Q8N3Y3 721 aa18.87■□□□□ 0.61
CCL3-206ENST00000614051 ZNF646O15015 1829 aaPredicted RBP18.87■□□□□ 0.61
CCL3-206ENST00000614051 SBF1O95248 1867 aa18.86■□□□□ 0.61
CCL3-206ENST00000614051 CHGBP05060 677 aa18.86■□□□□ 0.61
CCL3-206ENST00000614051 FSD1Q9BTV5 496 aa18.86■□□□□ 0.61
CCL3-206ENST00000614051 GTF2IP78347 998 aa18.85■□□□□ 0.61
CCL3-206ENST00000614051 FBXW7Q969H0 707 aa18.85■□□□□ 0.61
CCL3-206ENST00000614051 LTBP3Q9NS15 1303 aa18.85■□□□□ 0.61
CCL3-206ENST00000614051 YDJCA8MPS7 323 aa18.84■□□□□ 0.61
CCL3-206ENST00000614051 SLFNL1Q499Z3 407 aa18.84■□□□□ 0.61
CCL3-206ENST00000614051 KBTBD3Q8NAB2 608 aa18.84■□□□□ 0.61
CCL3-206ENST00000614051 PDS5AQ29RF7 1337 aaKnown RBP18.84■□□□□ 0.61
CCL3-206ENST00000614051 PSME4Q14997 1843 aa18.84■□□□□ 0.61
CCL3-206ENST00000614051 GRIK5Q16478 980 aa18.84■□□□□ 0.61
CCL3-206ENST00000614051 PODNQ7Z5L7 613 aa18.84■□□□□ 0.61
CCL3-206ENST00000614051 MXD3Q9BW11 206 aa18.84■□□□□ 0.61
CCL3-206ENST00000614051 VPS33BQ9H267 617 aa18.84■□□□□ 0.61
CCL3-206ENST00000614051 ABCF2Q9UG63 623 aa18.84■□□□□ 0.61
CCL3-206ENST00000614051 CDC45O75419 566 aa18.83■□□□□ 0.6
CCL3-206ENST00000614051 IDH1O75874 414 aaKnown RBP18.83■□□□□ 0.6
CCL3-206ENST00000614051 TTF1Q15361 905 aaPredicted RBP18.83■□□□□ 0.6
CCL3-206ENST00000614051 C8orf34Q49A92 452 aa18.83■□□□□ 0.6
CCL3-206ENST00000614051 DICER1Q9UPY3 1922 aaKnown RBP18.82■□□□□ 0.6
CCL3-206ENST00000614051 FAM205AQ6ZU69 1335 aa18.82■□□□□ 0.6
CCL3-206ENST00000614051 CHMLP26374 656 aa18.82■□□□□ 0.6
CCL3-206ENST00000614051 TTLL5Q6EMB2 1281 aa18.82■□□□□ 0.6
CCL3-206ENST00000614051 NIM1KQ8IY84 436 aa18.82■□□□□ 0.6
CCL3-206ENST00000614051 WDR66Q8TBY9 1149 aa18.82■□□□□ 0.6
CCL3-206ENST00000614051 LRP2BPQ9P2M1 347 aa18.82■□□□□ 0.6
CCL3-206ENST00000614051 PRDX5P30044 214 aa18.81■□□□□ 0.6
CCL3-206ENST00000614051 RAD17O75943 681 aa18.8■□□□□ 0.6
CCL3-206ENST00000614051 CERS5Q8N5B7 392 aa18.8■□□□□ 0.6
CCL3-206ENST00000614051 RAI14Q9P0K7 980 aa18.8■□□□□ 0.6
CCL3-206ENST00000614051 ZNRF3Q9ULT6 936 aa18.8■□□□□ 0.6
CCL3-206ENST00000614051 SALL1Q9NSC2 1324 aa18.8■□□□□ 0.6
CCL3-206ENST00000614051 USP17L3A6NCW0 530 aa18.79■□□□□ 0.6
CCL3-206ENST00000614051 USP17L4A6NCW7 530 aa18.79■□□□□ 0.6
CCL3-206ENST00000614051 NMIQ13287 307 aaPredicted RBP18.79■□□□□ 0.6
CCL3-206ENST00000614051 MFSD14BQ5SR56 506 aa18.79■□□□□ 0.6
CCL3-206ENST00000614051 SLC9C2Q5TAH2 1124 aa18.79■□□□□ 0.6
CCL3-206ENST00000614051 USP17L1Q7RTZ2 530 aa18.79■□□□□ 0.6
CCL3-206ENST00000614051 JDP2Q8WYK2 163 aa18.79■□□□□ 0.6
CCL3-206ENST00000614051 FAM227BQ96M60 508 aa18.79■□□□□ 0.6
CCL3-206ENST00000614051 MAST2Q6P0Q8 1798 aa18.79■□□□□ 0.6
CCL3-206ENST00000614051 RNF113AO15541 343 aaKnown RBP18.78■□□□□ 0.6
CCL3-206ENST00000614051 PDE6AP16499 860 aa18.78■□□□□ 0.6
CCL3-206ENST00000614051 LMNB1P20700 586 aa18.78■□□□□ 0.6
CCL3-206ENST00000614051 MAP3K12Q12852 859 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms