RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 NUTM2GQ5VZR2 741 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 SLC4A10Q6U841 1118 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 ARMCX6Q7L4S7 300 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 TSPAN18Q96SJ8 248 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 PRDM9Q9NQV7 894 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 FMN2Q9NZ56 1722 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 IBTKQ9P2D0 1353 aaPredicted RBP7.91□□□□□ -1.14
CDKAL1-204ENST00000613575 HEG1Q9ULI3 1381 aa7.91□□□□□ -1.14
CDKAL1-204ENST00000613575 AOX1Q06278 1338 aa7.91□□□□□ -1.14
CDKAL1-204ENST00000613575 SMARCA5O60264 1052 aaPredicted RBP7.91□□□□□ -1.14
CDKAL1-204ENST00000613575 RAB11FIP3O75154 756 aa7.91□□□□□ -1.14
CDKAL1-204ENST00000613575 CD2BP2O95400 341 aaKnown RBP7.91□□□□□ -1.14
CDKAL1-204ENST00000613575 S1PR4O95977 384 aa7.91□□□□□ -1.14
CDKAL1-204ENST00000613575 SLFN14P0C7P3 912 aa7.91□□□□□ -1.14
CDKAL1-204ENST00000613575 ESCO1Q5FWF5 840 aa7.91□□□□□ -1.14
CDKAL1-204ENST00000613575 JMYQ8N9B5 988 aa7.91□□□□□ -1.14
CDKAL1-204ENST00000613575 LRRCC1Q9C099 1032 aa7.91□□□□□ -1.14
CDKAL1-204ENST00000613575 LGR6Q9HBX8 967 aa7.91□□□□□ -1.14
CDKAL1-204ENST00000613575 PXDNLA1KZ92 1463 aa7.9□□□□□ -1.14
CDKAL1-204ENST00000613575 ERC2O15083 957 aa7.9□□□□□ -1.14
CDKAL1-204ENST00000613575 HSP90AB1P08238 724 aaKnown RBP7.9□□□□□ -1.14
CDKAL1-204ENST00000613575 JUNDP17535 347 aa7.9□□□□□ -1.14
CDKAL1-204ENST00000613575 HSPA1LP34931 641 aa7.9□□□□□ -1.14
CDKAL1-204ENST00000613575 SKOR2Q2VWA4 1001 aaPredicted RBP7.9□□□□□ -1.14
CDKAL1-204ENST00000613575 HDGFL1Q5TGJ6 251 aa7.9□□□□□ -1.14
CDKAL1-204ENST00000613575 RPAINQ86UA6 219 aa7.9□□□□□ -1.14
CDKAL1-204ENST00000613575 FAM177A1Q8N128 213 aaPredicted RBP7.9□□□□□ -1.14
CDKAL1-204ENST00000613575 TNPO1Q92973 898 aaKnown RBP7.9□□□□□ -1.14
CDKAL1-204ENST00000613575 SUDS3Q9H7L9 328 aaPredicted RBP7.9□□□□□ -1.14
CDKAL1-204ENST00000613575 SUFUQ9UMX1 484 aa7.9□□□□□ -1.14
CDKAL1-204ENST00000613575 NFAT5O94916 1531 aa7.9□□□□□ -1.15
CDKAL1-204ENST00000613575 LRRC37A3O60309 1634 aa7.9□□□□□ -1.15
CDKAL1-204ENST00000613575 FER1L4A9Z1Z3 1794 aa7.9□□□□□ -1.15
CDKAL1-204ENST00000613575 PNMA6EA0A0J9YXQ4 647 aa7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 IPO7O95373 1038 aaKnown RBP7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 GGCXP38435 758 aa7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 CTDSPL2Q05D32 466 aa7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 BEND3Q5T5X7 828 aa7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 LTV1Q96GA3 475 aaPredicted RBP7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 MARF1Q9Y4F3 1742 aaKnown RBP7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 OVOS2A0A0G2JMS6 1433 aa7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 RNMTO43148 476 aaKnown RBP7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 CYP2E1P05181 493 aaPredicted RBP7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 MTX1Q13505 466 aa7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 MSL3Q8N5Y2 521 aaKnown RBP7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 GBP4Q96PP9 640 aa7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 GZF1Q9H116 711 aaPredicted RBP7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 CXorf56Q9H5V9 222 aa7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 C19orf44Q9H6X5 657 aa7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 ZKSCAN5Q9Y2L8 839 aa7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 PAXBP1Q9Y5B6 917 aa7.89□□□□□ -1.15
CDKAL1-204ENST00000613575 CHD2O14647 1828 aaKnown RBP7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 NPHP4O75161 1426 aaPredicted RBP7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 RGPD8O14715 1765 aaPredicted RBP7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 STRCQ7RTU9 1775 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 CCDC196A0A1B0GTZ2 297 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 UBAP1LF5GYI3 381 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 H0YHG0 523 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 GIGYF1O75420 1035 aaPredicted RBP7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 UBTFL1P0CB47 393 aaPredicted RBP7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 MX1P20591 662 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 MCM2P49736 904 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 NUCB2P80303 420 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 SARNPP82979 210 aaKnown RBP7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 TERF2Q15554 542 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 ZRSR2Q15696 482 aaKnown RBP7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 C11orf91Q3C1V1 193 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 DESI1Q6ICB0 168 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 CCDC24Q8N4L8 307 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 DNAAF4Q8WXU2 420 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 ORAI2Q96SN7 254 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 DEF6Q9H4E7 631 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 PHAXQ9H814 394 aaKnown RBP7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 ANAPC4Q9UJX5 808 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 EXOC6BQ9Y2D4 811 aa7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 LRRFIP2Q9Y608 721 aaKnown RBP7.88□□□□□ -1.15
CDKAL1-204ENST00000613575 PHRF1Q9P1Y6 1649 aaKnown RBP7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 CCDC189A1A4V9 331 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 BTBD11A6QL63 1104 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 PPEF1O14829 653 aaPredicted RBP7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 ALDH1L1O75891 902 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 DXOO77932 396 aaKnown RBP7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 TPM3P06753 285 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 USP17L8P0C7I0 530 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 CHMLP26374 656 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 CASQ1P31415 396 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 NASPP49321 788 aaPredicted RBP7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 BIRC2Q13490 618 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 PPP1R42Q7Z4L9 355 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 USHBP1Q8N6Y0 703 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 ESYT1Q9BSJ8 1104 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 NUCKS1Q9H1E3 243 aaKnown RBP7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 DBF4Q9UBU7 674 aaPredicted RBP7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 CCDC39Q9UFE4 941 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 PLEKHG2Q9H7P9 1386 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 SETD1BQ9UPS6 1966 aaKnown RBP7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 USP42Q9H9J4 1324 aaKnown RBP7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 SLIT3O75094 1523 aa7.87□□□□□ -1.15
CDKAL1-204ENST00000613575 PI4KAP2A4QPH2 592 aa7.86□□□□□ -1.15
CDKAL1-204ENST00000613575 KCNQ3O43525 872 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms