RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 PAFAH1B1P43034 410 aa15.75■□□□□ 0.11
GGA3-220ENST00000613421 KAT6BQ8WYB5 2073 aa15.75■□□□□ 0.11
GGA3-220ENST00000613421 FAM160A1Q05DH4 1040 aa15.75■□□□□ 0.11
GGA3-220ENST00000613421 ENOX2Q16206 610 aaKnown RBP15.75■□□□□ 0.11
GGA3-220ENST00000613421 ZNF496Q96IT1 587 aaPredicted RBP15.75■□□□□ 0.11
GGA3-220ENST00000613421 PHF23Q9BUL5 403 aaPredicted RBP15.75■□□□□ 0.11
GGA3-220ENST00000613421 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.75■□□□□ 0.115e-7■■■□□ 15.3
GGA3-220ENST00000613421 CHD1O14646 1710 aa15.75■□□□□ 0.11
GGA3-220ENST00000613421 ST5P78524 1137 aa15.75■□□□□ 0.11
GGA3-220ENST00000613421 DHX58Q96C10 678 aa15.75■□□□□ 0.11
GGA3-220ENST00000613421 LRRC27Q9C0I9 530 aa15.75■□□□□ 0.11
GGA3-220ENST00000613421 BRD1O95696 1058 aa15.75■□□□□ 0.11
GGA3-220ENST00000613421 ITGA6P23229 1130 aa15.75■□□□□ 0.11
GGA3-220ENST00000613421 WWC2Q6AWC2 1192 aa15.75■□□□□ 0.11
GGA3-220ENST00000613421 XAGE2Q96GT9 111 aa15.75■□□□□ 0.11
GGA3-220ENST00000613421 MBD4O95243 580 aa15.74■□□□□ 0.11
GGA3-220ENST00000613421 ZNF594Q96JF6 807 aaPredicted RBP15.74■□□□□ 0.11
GGA3-220ENST00000613421 IBTKQ9P2D0 1353 aaPredicted RBP15.74■□□□□ 0.11
GGA3-220ENST00000613421 HEATR3Q7Z4Q2 680 aa15.74■□□□□ 0.11
GGA3-220ENST00000613421 TM6SF1Q9BZW5 370 aa15.74■□□□□ 0.11
GGA3-220ENST00000613421 HECW2Q9P2P5 1572 aa15.74■□□□□ 0.11
GGA3-220ENST00000613421 GIGYF1O75420 1035 aaPredicted RBP15.74■□□□□ 0.11
GGA3-220ENST00000613421 APPBP2Q92624 585 aa15.74■□□□□ 0.11
GGA3-220ENST00000613421 ALS2CR12Q96Q35 445 aa15.74■□□□□ 0.11
GGA3-220ENST00000613421 NYXQ9GZU5 481 aa15.74■□□□□ 0.11
GGA3-220ENST00000613421 KDRP35968 1356 aa15.74■□□□□ 0.11
GGA3-220ENST00000613421 KRT2P35908 639 aa15.74■□□□□ 0.11
GGA3-220ENST00000613421 KCNQ3O43525 872 aa15.73■□□□□ 0.11
GGA3-220ENST00000613421 A1BGP04217 495 aa15.73■□□□□ 0.11
GGA3-220ENST00000613421 FAM173BQ6P4H8 233 aa15.73■□□□□ 0.11
GGA3-220ENST00000613421 DNAI1Q9UI46 699 aa15.73■□□□□ 0.11
GGA3-220ENST00000613421 A0A1B0GVL5 298 aa15.73■□□□□ 0.11
GGA3-220ENST00000613421 NEURL1BA8MQ27 555 aa15.73■□□□□ 0.11
GGA3-220ENST00000613421 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.73■□□□□ 0.11
GGA3-220ENST00000613421 EHMT1Q9H9B1 1298 aa15.73■□□□□ 0.11
GGA3-220ENST00000613421 CALML3P27482 149 aa15.73■□□□□ 0.11
GGA3-220ENST00000613421 ZMYND15Q9H091 742 aa15.73■□□□□ 0.11
GGA3-220ENST00000613421 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.73■□□□□ 0.113e-9■■■■■ 44.2
GGA3-220ENST00000613421 GADD45BO75293 160 aaPredicted RBP15.72■□□□□ 0.11
GGA3-220ENST00000613421 MATR3P43243 847 aaKnown RBP eCLIP15.72■□□□□ 0.11
GGA3-220ENST00000613421 NDUFB9Q9Y6M9 179 aa15.72■□□□□ 0.11
GGA3-220ENST00000613421 TRIM21P19474 475 aaKnown RBP15.72■□□□□ 0.11
GGA3-220ENST00000613421 DNA2P51530 1060 aa15.72■□□□□ 0.11
GGA3-220ENST00000613421 NCOA5Q9HCD5 579 aaKnown RBP15.72■□□□□ 0.11
GGA3-220ENST00000613421 IFNKQ9P0W0 207 aa15.72■□□□□ 0.11
GGA3-220ENST00000613421 BMS1Q14692 1282 aaKnown RBP15.72■□□□□ 0.11
GGA3-220ENST00000613421 BEND3Q5T5X7 828 aa15.72■□□□□ 0.11
GGA3-220ENST00000613421 CLSTN2Q9H4D0 955 aa15.72■□□□□ 0.11
GGA3-220ENST00000613421 RRAGDQ9NQL2 400 aaPredicted RBP15.72■□□□□ 0.11
GGA3-220ENST00000613421 POLR3GO15318 223 aaPredicted RBP15.72■□□□□ 0.11
GGA3-220ENST00000613421 TUBB4AP04350 444 aa15.72■□□□□ 0.11
GGA3-220ENST00000613421 ATP5JP18859 108 aa15.72■□□□□ 0.11
GGA3-220ENST00000613421 PUM3Q15397 648 aaKnown RBP15.72■□□□□ 0.11
GGA3-220ENST00000613421 KRI1Q8N9T8 703 aaKnown RBP15.72■□□□□ 0.11
GGA3-220ENST00000613421 TMEM87BQ96K49 555 aa15.72■□□□□ 0.11
GGA3-220ENST00000613421 ELP1O95163 1332 aa15.72■□□□□ 0.11
GGA3-220ENST00000613421 MAP3K4Q9Y6R4 1608 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 B4E1Z4 1266 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 EHBP1Q8NDI1 1231 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 ZNF219Q9P2Y4 722 aaPredicted RBP15.71■□□□□ 0.11
GGA3-220ENST00000613421 GPAA1O43292 621 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 HSPA2P54652 639 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 ZNF804AQ7Z570 1209 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 ZSWIM4Q9H7M6 989 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 BTG4Q9NY30 223 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 SPDYE4A6NLX3 237 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 PSMA7O14818 248 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 NAPAP54920 295 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 MCM9Q9NXL9 1143 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 PALD1Q9ULE6 856 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 UNC13BO14795 1591 aa15.71■□□□□ 0.11
GGA3-220ENST00000613421 CLTCL1P53675 1640 aa15.71■□□□□ 0.1
GGA3-220ENST00000613421 TCERG1LQ5VWI1 586 aa15.71■□□□□ 0.1
GGA3-220ENST00000613421 TPTE2Q6XPS3 522 aa15.71■□□□□ 0.1
GGA3-220ENST00000613421 CDC37L1Q7L3B6 337 aa15.71■□□□□ 0.1
GGA3-220ENST00000613421 LEO1Q8WVC0 666 aaPredicted RBP15.71■□□□□ 0.1
GGA3-220ENST00000613421 SH3TC1Q8TE82 1336 aa15.7■□□□□ 0.1
GGA3-220ENST00000613421 ZNF853P0CG23 659 aa15.7■□□□□ 0.1
GGA3-220ENST00000613421 CABP5Q9NP86 173 aa15.7■□□□□ 0.1
GGA3-220ENST00000613421 PLEKHG1Q9ULL1 1385 aa15.7■□□□□ 0.1
GGA3-220ENST00000613421 ZKSCAN3Q9BRR0 538 aa15.7■□□□□ 0.1
GGA3-220ENST00000613421 ANGEL1Q9UNK9 670 aaKnown RBP15.7■□□□□ 0.1
GGA3-220ENST00000613421 PDE8AO60658 829 aa15.7■□□□□ 0.1
GGA3-220ENST00000613421 TAX1BP1Q86VP1 789 aa15.7■□□□□ 0.1
GGA3-220ENST00000613421 TMEM63CQ9P1W3 806 aa15.7■□□□□ 0.1
GGA3-220ENST00000613421 IGSF1Q8N6C5 1336 aa15.69■□□□□ 0.1
GGA3-220ENST00000613421 POTEJP0CG39 1038 aa15.69■□□□□ 0.1
GGA3-220ENST00000613421 NEFHP12036 1026 aa15.69■□□□□ 0.1
GGA3-220ENST00000613421 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.69■□□□□ 0.1
GGA3-220ENST00000613421 RBM28Q9NW13 759 aaKnown RBP15.69■□□□□ 0.1
GGA3-220ENST00000613421 ABCC3O15438 1527 aa15.69■□□□□ 0.1
GGA3-220ENST00000613421 SLU7O95391 586 aaKnown RBP15.69■□□□□ 0.1
GGA3-220ENST00000613421 ANO1Q5XXA6 986 aa15.69■□□□□ 0.1
GGA3-220ENST00000613421 ANKRD2Q9GZV1 360 aa15.69■□□□□ 0.1
GGA3-220ENST00000613421 AKR1B10O60218 316 aa15.69■□□□□ 0.1
GGA3-220ENST00000613421 PARP10Q53GL7 1025 aa15.69■□□□□ 0.1
GGA3-220ENST00000613421 TAF3Q5VWG9 929 aa15.69■□□□□ 0.1
GGA3-220ENST00000613421 JADE2Q9NQC1 790 aa15.69■□□□□ 0.1
GGA3-220ENST00000613421 CROCC2H7BZ55 1655 aa15.69■□□□□ 0.1
GGA3-220ENST00000613421 CDK12Q9NYV4 1490 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms