RNA–Protein interactions for RNA: ENST00000612968.1

ARHGEF12-214, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 2

Gene ARHGEF12, Length 1,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-214ENST00000612968 CPSF1Q10570 1443 aaKnown RBP10.29□□□□□ -0.76
ARHGEF12-214ENST00000612968 PPIP5K1Q6PFW1 1433 aa10.29□□□□□ -0.76
ARHGEF12-214ENST00000612968 ROBO2Q9HCK4 1378 aa10.28□□□□□ -0.76
ARHGEF12-214ENST00000612968 BACH1O14867 736 aa10.28□□□□□ -0.76
ARHGEF12-214ENST00000612968 DYRK3O43781 588 aa10.28□□□□□ -0.76
ARHGEF12-214ENST00000612968 SLFN5Q08AF3 891 aa10.28□□□□□ -0.76
ARHGEF12-214ENST00000612968 TRIM28Q13263 835 aaKnown RBP10.28□□□□□ -0.76
ARHGEF12-214ENST00000612968 ARTNQ5T4W7 220 aa10.28□□□□□ -0.76
ARHGEF12-214ENST00000612968 PNNQ9H307 717 aaKnown RBP10.28□□□□□ -0.76
ARHGEF12-214ENST00000612968 STRN4Q9NRL3 753 aa10.28□□□□□ -0.76
ARHGEF12-214ENST00000612968 PTCH1Q13635 1447 aa10.28□□□□□ -0.76
ARHGEF12-214ENST00000612968 ADGRB2O60241 1585 aa10.28□□□□□ -0.76
ARHGEF12-214ENST00000612968 PIK3R4Q99570 1358 aa10.28□□□□□ -0.76
ARHGEF12-214ENST00000612968 POM121CA8CG34 1229 aa10.27□□□□□ -0.76
ARHGEF12-214ENST00000612968 TMEM229AB2RXF0 380 aa10.27□□□□□ -0.76
ARHGEF12-214ENST00000612968 RAD21O60216 631 aa10.27□□□□□ -0.76
ARHGEF12-214ENST00000612968 DUSP27Q5VZP5 1158 aa10.27□□□□□ -0.76
ARHGEF12-214ENST00000612968 ADAMTS19Q8TE59 1207 aa10.27□□□□□ -0.76
ARHGEF12-214ENST00000612968 MDFIQ99750 246 aa10.27□□□□□ -0.76
ARHGEF12-214ENST00000612968 M0R082 166 aa10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 CCDC27Q2M243 656 aa10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 TRMT2AQ8IZ69 625 aaKnown RBP10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 ZNF417Q8TAU3 575 aa10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 ZNF587Q96SQ5 575 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 NEUROD4Q9HD90 331 aa10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 CDC42BPGQ6DT37 1551 aa10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 PNPLA6Q8IY17 1366 aa10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 U2AF1L5P0DN76 240 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 U2AF1Q01081 240 aaKnown RBP eCLIP10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 NBPF11Q86T75 865 aa10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 TNFRSF25Q93038 417 aa10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 SLC26A8Q96RN1 970 aa10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 GPC6Q9Y625 555 aaPredicted RBP10.26□□□□□ -0.77
ARHGEF12-214ENST00000612968 IQSEC2Q5JU85 1478 aa10.25□□□□□ -0.77
ARHGEF12-214ENST00000612968 DIAPH1O60610 1272 aaKnown RBP10.25□□□□□ -0.77
ARHGEF12-214ENST00000612968 FOXD4L6Q3SYB3 417 aaPredicted RBP10.25□□□□□ -0.77
ARHGEF12-214ENST00000612968 FOXD4L3Q6VB84 417 aaPredicted RBP10.25□□□□□ -0.77
ARHGEF12-214ENST00000612968 WDR63Q8IWG1 891 aa10.25□□□□□ -0.77
ARHGEF12-214ENST00000612968 WWC1Q8IX03 1113 aa10.25□□□□□ -0.77
ARHGEF12-214ENST00000612968 CLUAP1Q96AJ1 413 aa10.25□□□□□ -0.77
ARHGEF12-214ENST00000612968 CCDC136Q96JN2 1154 aa10.25□□□□□ -0.77
ARHGEF12-214ENST00000612968 AMOTL2Q9Y2J4 779 aa10.25□□□□□ -0.77
ARHGEF12-214ENST00000612968 NKTRP30414 1462 aaKnown RBP10.24□□□□□ -0.77
ARHGEF12-214ENST00000612968 SHPRHQ149N8 1683 aa10.24□□□□□ -0.77
ARHGEF12-214ENST00000612968 AATKQ6ZMQ8 1374 aa10.24□□□□□ -0.77
ARHGEF12-214ENST00000612968 ANKRD26Q9UPS8 1709 aa10.24□□□□□ -0.77
ARHGEF12-214ENST00000612968 CEP170BQ9Y4F5 1589 aaPredicted RBP10.24□□□□□ -0.77
ARHGEF12-214ENST00000612968 PTPRUQ92729 1446 aa10.24□□□□□ -0.77
ARHGEF12-214ENST00000612968 B4GALNT3Q6L9W6 998 aa10.24□□□□□ -0.77
ARHGEF12-214ENST00000612968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.24□□□□□ -0.77
ARHGEF12-214ENST00000612968 TCP11L2Q8N4U5 519 aa10.24□□□□□ -0.77
ARHGEF12-214ENST00000612968 COL3A1P02461 1466 aaPredicted RBP10.24□□□□□ -0.77
ARHGEF12-214ENST00000612968 PRSS36Q5K4E3 855 aa10.23□□□□□ -0.77
ARHGEF12-214ENST00000612968 ANKLE2Q86XL3 938 aa10.23□□□□□ -0.77
ARHGEF12-214ENST00000612968 FNBP4Q8N3X1 1017 aaPredicted RBP10.23□□□□□ -0.77
ARHGEF12-214ENST00000612968 COG3Q96JB2 828 aa10.23□□□□□ -0.77
ARHGEF12-214ENST00000612968 PARP3Q9Y6F1 533 aa10.23□□□□□ -0.77
ARHGEF12-214ENST00000612968 USP3Q9Y6I4 520 aa10.23□□□□□ -0.77
ARHGEF12-214ENST00000612968 MAPK8IP3Q9UPT6 1336 aa10.23□□□□□ -0.77
ARHGEF12-214ENST00000612968 U2SURPO15042 1029 aaKnown RBP10.22□□□□□ -0.77
ARHGEF12-214ENST00000612968 MICALL1Q8N3F8 863 aa10.22□□□□□ -0.77
ARHGEF12-214ENST00000612968 SCHIP1Q9P0W5 487 aaPredicted RBP10.22□□□□□ -0.77
ARHGEF12-214ENST00000612968 PRR36Q9H6K5 1346 aa10.22□□□□□ -0.77
ARHGEF12-214ENST00000612968 C9orf172C9J069 976 aa10.21□□□□□ -0.78
ARHGEF12-214ENST00000612968 NEFMP07197 916 aa10.21□□□□□ -0.78
ARHGEF12-214ENST00000612968 SKIP12755 728 aa10.21□□□□□ -0.78
ARHGEF12-214ENST00000612968 TXLNAP40222 546 aa10.21□□□□□ -0.78
ARHGEF12-214ENST00000612968 COL9A3Q14050 684 aaPredicted RBP10.21□□□□□ -0.78
ARHGEF12-214ENST00000612968 LRRC69Q6ZNQ3 347 aa10.21□□□□□ -0.78
ARHGEF12-214ENST00000612968 MYH16Q9H6N6 1097 aa10.21□□□□□ -0.78
ARHGEF12-214ENST00000612968 POLKQ9UBT6 870 aa10.21□□□□□ -0.78
ARHGEF12-214ENST00000612968 PCDHGA11Q9Y5H2 935 aa10.21□□□□□ -0.78
ARHGEF12-214ENST00000612968 ANKARQ7Z5J8 1434 aa10.2□□□□□ -0.78
ARHGEF12-214ENST00000612968 KIF20BQ96Q89 1820 aa10.2□□□□□ -0.78
ARHGEF12-214ENST00000612968 H2AFB1P0C5Y9 115 aa10.2□□□□□ -0.78
ARHGEF12-214ENST00000612968 H2AFB2P0C5Z0 115 aa10.2□□□□□ -0.78
ARHGEF12-214ENST00000612968 TEAD4Q15561 434 aa10.2□□□□□ -0.78
ARHGEF12-214ENST00000612968 HDGFL1Q5TGJ6 251 aa10.2□□□□□ -0.78
ARHGEF12-214ENST00000612968 NME9Q86XW9 330 aa10.2□□□□□ -0.78
ARHGEF12-214ENST00000612968 CDK12Q9NYV4 1490 aaPredicted RBP10.2□□□□□ -0.78
ARHGEF12-214ENST00000612968 ADAMTSL3P82987 1691 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 RIMS1Q86UR5 1692 aaKnown RBP10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 FAM229AH3BQW9 127 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 EML1O00423 815 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 LZTS3O60299 673 aaPredicted RBP10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 NOS2P35228 1153 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 EML3Q32P44 896 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 KRTAP1-3Q8IUG1 177 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 NFATC2IPQ8NCF5 419 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 EXOC6Q8TAG9 804 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 PLEKHF1Q96S99 279 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 ACEP12821 1306 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 IL16Q14005 1332 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 TTC21BQ7Z4L5 1316 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 TTC21AQ8NDW8 1320 aa10.19□□□□□ -0.78
ARHGEF12-214ENST00000612968 ALBP02768 609 aa10.18□□□□□ -0.78
ARHGEF12-214ENST00000612968 CT47B1P0C2W7 299 aaPredicted RBP10.18□□□□□ -0.78
ARHGEF12-214ENST00000612968 GRIK4Q16099 956 aa10.18□□□□□ -0.78
ARHGEF12-214ENST00000612968 UCN2Q96RP3 112 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms