RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 OGFOD1Q8N543 542 aa22.43■■□□□ 1.18
SEMA3B-211ENST00000612509 GLIS2Q9BZE0 524 aaPredicted RBP22.43■■□□□ 1.18
SEMA3B-211ENST00000612509 DDX19BQ9UMR2 479 aa22.43■■□□□ 1.18
SEMA3B-211ENST00000612509 BCAMP50895 628 aa22.42■■□□□ 1.18
SEMA3B-211ENST00000612509 ATP8B2P98198 1209 aa22.42■■□□□ 1.18
SEMA3B-211ENST00000612509 SSH3Q8TE77 659 aa22.42■■□□□ 1.18
SEMA3B-211ENST00000612509 CREBZFQ9NS37 354 aa22.42■■□□□ 1.18
SEMA3B-211ENST00000612509 GGA3Q9NZ52 723 aa22.42■■□□□ 1.18
SEMA3B-211ENST00000612509 IQSEC3Q9UPP2 1182 aaPredicted RBP22.42■■□□□ 1.18
SEMA3B-211ENST00000612509 TRAF5O00463 557 aa22.41■■□□□ 1.18
SEMA3B-211ENST00000612509 CEP85Q6P2H3 762 aa22.41■■□□□ 1.18
SEMA3B-211ENST00000612509 HDAC9Q9UKV0 1011 aa22.41■■□□□ 1.18
SEMA3B-211ENST00000612509 COL1A1P02452 1464 aaPredicted RBP22.41■■□□□ 1.18
SEMA3B-211ENST00000612509 ASTN2O75129 1339 aaPredicted RBP22.4■■□□□ 1.18
SEMA3B-211ENST00000612509 POLR2AP24928 1970 aaKnown RBP22.4■■□□□ 1.18
SEMA3B-211ENST00000612509 MMP14P50281 582 aa22.4■■□□□ 1.18
SEMA3B-211ENST00000612509 FMR1Q06787 632 aaKnown RBP eCLIP22.4■■□□□ 1.18
SEMA3B-211ENST00000612509 PDE3AQ14432 1141 aa22.4■■□□□ 1.18
SEMA3B-211ENST00000612509 MFSD14BQ5SR56 506 aa22.4■■□□□ 1.18
SEMA3B-211ENST00000612509 C20orf194Q5TEA3 1177 aa22.4■■□□□ 1.18
SEMA3B-211ENST00000612509 ECM29Q5VYK3 1845 aa22.4■■□□□ 1.18
SEMA3B-211ENST00000612509 TMEM88BA6NKF7 163 aa22.39■■□□□ 1.17
SEMA3B-211ENST00000612509 TFCP2Q12800 502 aa22.39■■□□□ 1.17
SEMA3B-211ENST00000612509 CHAF1AQ13111 956 aaPredicted RBP22.39■■□□□ 1.17
SEMA3B-211ENST00000612509 SCARF1Q14162 830 aa22.39■■□□□ 1.17
SEMA3B-211ENST00000612509 CDC37L1Q7L3B6 337 aa22.39■■□□□ 1.17
SEMA3B-211ENST00000612509 F8W031 263 aaPredicted RBP22.38■■□□□ 1.17
SEMA3B-211ENST00000612509 FRAT2O75474 233 aaPredicted RBP22.38■■□□□ 1.17
SEMA3B-211ENST00000612509 G3BP1Q13283 466 aaKnown RBP eCLIP22.38■■□□□ 1.17
SEMA3B-211ENST00000612509 DCPSQ96C86 337 aaKnown RBP22.38■■□□□ 1.17
SEMA3B-211ENST00000612509 ADM5C9JUS6 153 aa22.37■■□□□ 1.17
SEMA3B-211ENST00000612509 ADORA1P30542 326 aa22.37■■□□□ 1.17
SEMA3B-211ENST00000612509 ANGEL2Q5VTE6 544 aaKnown RBP22.37■■□□□ 1.17
SEMA3B-211ENST00000612509 KRT26Q7Z3Y9 468 aa22.37■■□□□ 1.17
SEMA3B-211ENST00000612509 DNAJC5GQ8N7S2 189 aa22.37■■□□□ 1.17
SEMA3B-211ENST00000612509 AKAP2Q9Y2D5 859 aa22.37■■□□□ 1.17
SEMA3B-211ENST00000612509 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.37■■□□□ 1.17
SEMA3B-211ENST00000612509 PITPNM2Q9BZ72 1349 aa22.36■■□□□ 1.17
SEMA3B-211ENST00000612509 A0A1B0GUL7 405 aa22.36■■□□□ 1.17
SEMA3B-211ENST00000612509 WNT10BO00744 389 aa22.36■■□□□ 1.17
SEMA3B-211ENST00000612509 NBPF9Q3BBW0 867 aa22.36■■□□□ 1.17
SEMA3B-211ENST00000612509 USP48Q86UV5 1035 aa22.36■■□□□ 1.17
SEMA3B-211ENST00000612509 TBC1D22AQ8WUA7 517 aa22.36■■□□□ 1.17
SEMA3B-211ENST00000612509 KLRG1Q96E93 195 aa22.36■■□□□ 1.17
SEMA3B-211ENST00000612509 CHMP4BQ9H444 224 aaKnown RBP22.36■■□□□ 1.17
SEMA3B-211ENST00000612509 ZBTB40Q9NUA8 1239 aa22.36■■□□□ 1.17
SEMA3B-211ENST00000612509 SURF6O75683 361 aaKnown RBP22.35■■□□□ 1.17
SEMA3B-211ENST00000612509 PHKA1P46020 1223 aa22.35■■□□□ 1.17
SEMA3B-211ENST00000612509 OS9Q13438 667 aaPredicted RBP22.35■■□□□ 1.17
SEMA3B-211ENST00000612509 SULF1Q8IWU6 871 aa22.35■■□□□ 1.17
SEMA3B-211ENST00000612509 ZBED3Q96IU2 234 aaPredicted RBP22.35■■□□□ 1.17
SEMA3B-211ENST00000612509 CELF2O95319 508 aaKnown RBP22.34■■□□□ 1.17
SEMA3B-211ENST00000612509 NOP58Q9Y2X3 529 aaKnown RBP22.34■■□□□ 1.17
SEMA3B-211ENST00000612509 CNTNAP1P78357 1384 aa22.34■■□□□ 1.17
SEMA3B-211ENST00000612509 RRP1P56182 461 aaKnown RBP22.33■■□□□ 1.17
SEMA3B-211ENST00000612509 TIMM10P62072 90 aa22.33■■□□□ 1.17
SEMA3B-211ENST00000612509 CFAP100Q494V2 611 aa22.33■■□□□ 1.17
SEMA3B-211ENST00000612509 CST9Q5W186 159 aa22.33■■□□□ 1.17
SEMA3B-211ENST00000612509 CCDC102BQ68D86 513 aa22.33■■□□□ 1.17
SEMA3B-211ENST00000612509 DLK2Q6UY11 383 aa22.33■■□□□ 1.17
SEMA3B-211ENST00000612509 MTMR14Q8NCE2 650 aa22.33■■□□□ 1.17
SEMA3B-211ENST00000612509 XAGE2Q96GT9 111 aa22.33■■□□□ 1.17
SEMA3B-211ENST00000612509 ZNF408Q9H9D4 720 aa22.33■■□□□ 1.17
SEMA3B-211ENST00000612509 GNL3LQ9NVN8 582 aaKnown RBP22.33■■□□□ 1.17
SEMA3B-211ENST00000612509 TTF2Q9UNY4 1162 aaKnown RBP22.33■■□□□ 1.17
SEMA3B-211ENST00000612509 DLGAP5Q15398 846 aa22.32■■□□□ 1.16
SEMA3B-211ENST00000612509 GRIK5Q16478 980 aa22.32■■□□□ 1.16
SEMA3B-211ENST00000612509 ABT1Q9ULW3 272 aaKnown RBP22.32■■□□□ 1.16
SEMA3B-211ENST00000612509 PCDHAC2Q9Y5I4 1007 aa22.32■■□□□ 1.16
SEMA3B-211ENST00000612509 SPDYE2BA6NHP3 402 aa22.31■■□□□ 1.16
SEMA3B-211ENST00000612509 SEMA3EO15041 775 aa22.31■■□□□ 1.16
SEMA3B-211ENST00000612509 ZBTB22O15209 634 aa22.31■■□□□ 1.16
SEMA3B-211ENST00000612509 SPDYE6P0CI01 402 aa22.31■■□□□ 1.16
SEMA3B-211ENST00000612509 MKRN1Q9UHC7 482 aaKnown RBP22.31■■□□□ 1.16
SEMA3B-211ENST00000612509 RPAP2Q8IXW5 612 aaPredicted RBP22.3■■□□□ 1.16
SEMA3B-211ENST00000612509 WDR66Q8TBY9 1149 aa22.3■■□□□ 1.16
SEMA3B-211ENST00000612509 CDCA5Q96FF9 252 aa22.3■■□□□ 1.16
SEMA3B-211ENST00000612509 NEUROD6Q96NK8 337 aa22.3■■□□□ 1.16
SEMA3B-211ENST00000612509 SERPINA10Q9UK55 444 aa22.3■■□□□ 1.16
SEMA3B-211ENST00000612509 DENND2AQ9ULE3 1009 aa22.3■■□□□ 1.16
SEMA3B-211ENST00000612509 SCAF8Q9UPN6 1271 aaKnown RBP22.3■■□□□ 1.16
SEMA3B-211ENST00000612509 RASSF10A6NK89 507 aa22.29■■□□□ 1.16
SEMA3B-211ENST00000612509 RBM5P52756 815 aaKnown RBP eCLIP22.29■■□□□ 1.166e-12■■■□□ 16.5
SEMA3B-211ENST00000612509 RASGRF1Q13972 1273 aa22.29■■□□□ 1.16
SEMA3B-211ENST00000612509 TNNI3KQ59H18 835 aa22.29■■□□□ 1.16
SEMA3B-211ENST00000612509 APOBEC3FQ8IUX4 373 aaKnown RBP22.29■■□□□ 1.16
SEMA3B-211ENST00000612509 GPR108Q9NPR9 543 aa22.29■■□□□ 1.16
SEMA3B-211ENST00000612509 EXOC6BQ9Y2D4 811 aa22.29■■□□□ 1.16
SEMA3B-211ENST00000612509 SUGT1Q9Y2Z0 365 aa22.29■■□□□ 1.16
SEMA3B-211ENST00000612509 TLL2Q9Y6L7 1015 aa22.29■■□□□ 1.16
SEMA3B-211ENST00000612509 FPGT-TNNI3KV9GXZ4 949 aa22.29■■□□□ 1.16
SEMA3B-211ENST00000612509 MAST3O60307 1309 aa22.29■■□□□ 1.16
SEMA3B-211ENST00000612509 HMMRO75330 724 aa22.28■■□□□ 1.16
SEMA3B-211ENST00000612509 CRKP46108 304 aa22.28■■□□□ 1.16
SEMA3B-211ENST00000612509 AOX1Q06278 1338 aa22.28■■□□□ 1.16
SEMA3B-211ENST00000612509 PDS5AQ29RF7 1337 aaKnown RBP22.28■■□□□ 1.16
SEMA3B-211ENST00000612509 SALL1Q9NSC2 1324 aa22.28■■□□□ 1.16
SEMA3B-211ENST00000612509 PAPPA2Q9BXP8 1791 aa22.27■■□□□ 1.16
SEMA3B-211ENST00000612509 MYO1BO43795 1136 aa22.27■■□□□ 1.16
SEMA3B-211ENST00000612509 SIRT2Q8IXJ6 389 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms