RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 AOC3Q16853 763 aa23.62■■□□□ 1.37
SRRM3-205ENST00000612155 WASHC4Q2M389 1173 aa23.62■■□□□ 1.37
SRRM3-205ENST00000612155 TNPO1Q92973 898 aaKnown RBP23.62■■□□□ 1.37
SRRM3-205ENST00000612155 IL17RAQ96F46 866 aa23.62■■□□□ 1.37
SRRM3-205ENST00000612155 BOLA2Q9H3K6 86 aa23.62■■□□□ 1.37
SRRM3-205ENST00000612155 NFKBIEO00221 500 aa23.62■■□□□ 1.37
SRRM3-205ENST00000612155 HSP90AA1P07900 732 aaKnown RBP23.61■■□□□ 1.37
SRRM3-205ENST00000612155 TTC39AQ5SRH9 613 aa23.61■■□□□ 1.37
SRRM3-205ENST00000612155 VPS37DQ86XT2 251 aa23.61■■□□□ 1.37
SRRM3-205ENST00000612155 EDC3Q96F86 508 aaKnown RBP23.61■■□□□ 1.37
SRRM3-205ENST00000612155 RTKN2Q8IZC4 609 aa23.61■■□□□ 1.37
SRRM3-205ENST00000612155 LSG1Q9H089 658 aaKnown RBP23.61■■□□□ 1.37
SRRM3-205ENST00000612155 ARAP2Q8WZ64 1704 aa23.61■■□□□ 1.37
SRRM3-205ENST00000612155 CCDC158Q5M9N0 1113 aa23.6■■□□□ 1.37
SRRM3-205ENST00000612155 CC2D2BQ6DHV5 1058 aa23.6■■□□□ 1.37
SRRM3-205ENST00000612155 ZC3H12CQ9C0D7 883 aaKnown RBP23.6■■□□□ 1.37
SRRM3-205ENST00000612155 DBNDD1Q9H9R9 158 aa23.6■■□□□ 1.37
SRRM3-205ENST00000612155 CAVIN4Q5BKX8 364 aa23.59■■□□□ 1.37
SRRM3-205ENST00000612155 CWC27Q6UX04 472 aaKnown RBP23.59■■□□□ 1.37
SRRM3-205ENST00000612155 ARHGAP27Q6ZUM4 889 aa23.59■■□□□ 1.37
SRRM3-205ENST00000612155 ARFGEF1Q9Y6D6 1849 aa23.59■■□□□ 1.37
SRRM3-205ENST00000612155 ST18O60284 1047 aa23.59■■□□□ 1.37
SRRM3-205ENST00000612155 HIBADHP31937 336 aaKnown RBP23.59■■□□□ 1.37
SRRM3-205ENST00000612155 PRELPP51888 382 aa23.59■■□□□ 1.37
SRRM3-205ENST00000612155 NEK4P51957 841 aa23.59■■□□□ 1.37
SRRM3-205ENST00000612155 RTFDC1Q9BY42 306 aaPredicted RBP23.59■■□□□ 1.37
SRRM3-205ENST00000612155 HSPA4P34932 840 aa23.58■■□□□ 1.37
SRRM3-205ENST00000612155 MCAMP43121 646 aa23.58■■□□□ 1.37
SRRM3-205ENST00000612155 ANAPC15P60006 121 aa23.58■■□□□ 1.37
SRRM3-205ENST00000612155 FBXO33Q7Z6M2 555 aa23.58■■□□□ 1.37
SRRM3-205ENST00000612155 DNAJC2Q99543 621 aaKnown RBP23.58■■□□□ 1.37
SRRM3-205ENST00000612155 FER1L6Q2WGJ9 1857 aa23.58■■□□□ 1.37
SRRM3-205ENST00000612155 PPIP5K2O43314 1243 aa23.58■■□□□ 1.36
SRRM3-205ENST00000612155 FKBP4Q02790 459 aaKnown RBP eCLIP23.58■■□□□ 1.36
SRRM3-205ENST00000612155 TAOK3Q9H2K8 898 aa23.58■■□□□ 1.36
SRRM3-205ENST00000612155 KCNQ5Q9NR82 932 aa23.58■■□□□ 1.36
SRRM3-205ENST00000612155 MED23Q9ULK4 1368 aa23.57■■□□□ 1.36
SRRM3-205ENST00000612155 RAD50Q92878 1312 aa23.57■■□□□ 1.36
SRRM3-205ENST00000612155 RASGRF1Q13972 1273 aa23.57■■□□□ 1.36
SRRM3-205ENST00000612155 GPR162Q16538 588 aa23.57■■□□□ 1.36
SRRM3-205ENST00000612155 SOGA3Q5TF21 947 aa23.57■■□□□ 1.36
SRRM3-205ENST00000612155 GPATCH3Q96I76 525 aa23.57■■□□□ 1.36
SRRM3-205ENST00000612155 EPB41L2O43491 1005 aaKnown RBP23.57■■□□□ 1.36
SRRM3-205ENST00000612155 PSMD1Q99460 953 aa23.57■■□□□ 1.36
SRRM3-205ENST00000612155 COL4A5P29400 1685 aa23.56■■□□□ 1.36
SRRM3-205ENST00000612155 MCCP23508 829 aa23.56■■□□□ 1.36
SRRM3-205ENST00000612155 ZGPATQ8N5A5 531 aaKnown RBP23.56■■□□□ 1.36
SRRM3-205ENST00000612155 EVI5LQ96CN4 794 aa23.55■■□□□ 1.36
SRRM3-205ENST00000612155 EYA3Q99504 573 aa23.55■■□□□ 1.36
SRRM3-205ENST00000612155 CD209Q9NNX6 404 aa23.55■■□□□ 1.36
SRRM3-205ENST00000612155 COL1A1P02452 1464 aaPredicted RBP23.55■■□□□ 1.36
SRRM3-205ENST00000612155 ATP5JP18859 108 aa23.55■■□□□ 1.36
SRRM3-205ENST00000612155 ZAP70P43403 619 aa23.55■■□□□ 1.36
SRRM3-205ENST00000612155 CHAF1AQ13111 956 aaPredicted RBP23.55■■□□□ 1.36
SRRM3-205ENST00000612155 ZNF804AQ7Z570 1209 aa23.55■■□□□ 1.36
SRRM3-205ENST00000612155 HMG20BQ9P0W2 317 aa23.55■■□□□ 1.36
SRRM3-205ENST00000612155 CHD4Q14839 1912 aa23.54■■□□□ 1.36
SRRM3-205ENST00000612155 G3V3G9 751 aa23.54■■□□□ 1.36
SRRM3-205ENST00000612155 DCAF8Q5TAQ9 597 aa23.54■■□□□ 1.36
SRRM3-205ENST00000612155 LARGE2Q8N3Y3 721 aa23.54■■□□□ 1.36
SRRM3-205ENST00000612155 ARID4AP29374 1257 aaPredicted RBP23.54■■□□□ 1.36
SRRM3-205ENST00000612155 PTH1RQ03431 593 aa23.54■■□□□ 1.36
SRRM3-205ENST00000612155 KIAA2012Q0VF49 1180 aa23.54■■□□□ 1.36
SRRM3-205ENST00000612155 C15orf52Q6ZUT6 534 aaKnown RBP23.54■■□□□ 1.36
SRRM3-205ENST00000612155 RASEFQ8IZ41 740 aa23.54■■□□□ 1.36
SRRM3-205ENST00000612155 FBXW7Q969H0 707 aa23.54■■□□□ 1.36
SRRM3-205ENST00000612155 UPF3BQ9BZI7 483 aaKnown RBP23.53■■□□□ 1.36
SRRM3-205ENST00000612155 AKAP11Q9UKA4 1901 aa23.53■■□□□ 1.36
SRRM3-205ENST00000612155 GOLIM4O00461 696 aa23.52■■□□□ 1.36
SRRM3-205ENST00000612155 IARSP41252 1262 aaKnown RBP23.52■■□□□ 1.36
SRRM3-205ENST00000612155 PKP1Q13835 747 aa23.52■■□□□ 1.36
SRRM3-205ENST00000612155 SUPT20HQ8NEM7 779 aa23.52■■□□□ 1.36
SRRM3-205ENST00000612155 TMX3Q96JJ7 454 aa23.52■■□□□ 1.36
SRRM3-205ENST00000612155 DIAPH3Q9NSV4 1193 aa23.52■■□□□ 1.36
SRRM3-205ENST00000612155 SNX14Q9Y5W7 946 aa23.52■■□□□ 1.36
SRRM3-205ENST00000612155 ECE2O60344 883 aa23.52■■□□□ 1.36
SRRM3-205ENST00000612155 SPATA5Q8NB90 893 aa23.52■■□□□ 1.36
SRRM3-205ENST00000612155 FAM227BQ96M60 508 aa23.52■■□□□ 1.36
SRRM3-205ENST00000612155 CHGBP05060 677 aa23.51■■□□□ 1.35
SRRM3-205ENST00000612155 MXD3Q9BW11 206 aa23.51■■□□□ 1.35
SRRM3-205ENST00000612155 CYP2E1P05181 493 aaPredicted RBP23.51■■□□□ 1.35
SRRM3-205ENST00000612155 TDRD7Q8NHU6 1098 aaKnown RBP23.51■■□□□ 1.35
SRRM3-205ENST00000612155 GNL3LQ9NVN8 582 aaKnown RBP23.51■■□□□ 1.35
SRRM3-205ENST00000612155 CCDC88AQ3V6T2 1871 aa23.51■■□□□ 1.35
SRRM3-205ENST00000612155 YDJCA8MPS7 323 aa23.5■■□□□ 1.35
SRRM3-205ENST00000612155 UQCRFS1P1P0C7P4 283 aa23.5■■□□□ 1.35
SRRM3-205ENST00000612155 GRIPAP1Q4V328 841 aa23.5■■□□□ 1.35
SRRM3-205ENST00000612155 HAUS7Q99871 368 aa23.5■■□□□ 1.35
SRRM3-205ENST00000612155 GTF2IP78347 998 aa23.5■■□□□ 1.35
SRRM3-205ENST00000612155 NMIQ13287 307 aaPredicted RBP23.5■■□□□ 1.35
SRRM3-205ENST00000612155 COA1Q9GZY4 146 aa23.5■■□□□ 1.35
SRRM3-205ENST00000612155 SCN9AQ15858 1988 aa23.49■■□□□ 1.35
SRRM3-205ENST00000612155 IL1R1P14778 569 aa23.49■■□□□ 1.35
SRRM3-205ENST00000612155 SLFNL1Q499Z3 407 aa23.49■■□□□ 1.35
SRRM3-205ENST00000612155 TRAK2O60296 914 aa23.48■■□□□ 1.35
SRRM3-205ENST00000612155 PAG1Q9NWQ8 432 aa23.48■■□□□ 1.35
SRRM3-205ENST00000612155 MYO5AQ9Y4I1 1855 aaKnown RBP23.48■■□□□ 1.35
SRRM3-205ENST00000612155 MYH13Q9UKX3 1938 aa23.48■■□□□ 1.35
SRRM3-205ENST00000612155 ZNF512BQ96KM6 892 aaPredicted RBP23.48■■□□□ 1.35
SRRM3-205ENST00000612155 PIH1D3Q9NQM4 214 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms