RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 LEMD3Q9Y2U8 911 aa17.7■□□□□ 0.42
LINC00116-203ENST00000611969 PTCH2Q9Y6C5 1203 aa17.7■□□□□ 0.42
LINC00116-203ENST00000611969 PPP1R12BO60237 982 aaPredicted RBP17.69■□□□□ 0.42
LINC00116-203ENST00000611969 MYCP01106 439 aaPredicted RBP17.69■□□□□ 0.42
LINC00116-203ENST00000611969 PPP2R3BQ9Y5P8 575 aa17.69■□□□□ 0.42
LINC00116-203ENST00000611969 IRS2Q9Y4H2 1338 aa17.69■□□□□ 0.42
LINC00116-203ENST00000611969 RANBP2P49792 3224 aaKnown RBP17.68■□□□□ 0.42
LINC00116-203ENST00000611969 TESPA1A2RU30 521 aaPredicted RBP17.68■□□□□ 0.42
LINC00116-203ENST00000611969 F8W031 263 aaPredicted RBP17.68■□□□□ 0.42
LINC00116-203ENST00000611969 H0YGN5 161 aa17.68■□□□□ 0.42
LINC00116-203ENST00000611969 SNAP23O00161 211 aa17.68■□□□□ 0.42
LINC00116-203ENST00000611969 CWF19L2Q2TBE0 894 aaKnown RBP17.68■□□□□ 0.42
LINC00116-203ENST00000611969 C8orf58Q8NAV2 365 aa17.68■□□□□ 0.42
LINC00116-203ENST00000611969 MTMR14Q8NCE2 650 aa17.68■□□□□ 0.42
LINC00116-203ENST00000611969 TMEM106CQ9BVX2 250 aa17.68■□□□□ 0.42
LINC00116-203ENST00000611969 CD209Q9NNX6 404 aa17.68■□□□□ 0.42
LINC00116-203ENST00000611969 USP2O75604 605 aaPredicted RBP17.67■□□□□ 0.42
LINC00116-203ENST00000611969 DDX58O95786 925 aaKnown RBP17.67■□□□□ 0.42
LINC00116-203ENST00000611969 CFAP100Q494V2 611 aa17.67■□□□□ 0.42
LINC00116-203ENST00000611969 SLC9C1Q4G0N8 1177 aa17.67■□□□□ 0.42
LINC00116-203ENST00000611969 OTUD5Q96G74 571 aa17.67■□□□□ 0.42
LINC00116-203ENST00000611969 ELP3Q9H9T3 547 aa17.67■□□□□ 0.42
LINC00116-203ENST00000611969 VEZTQ9HBM0 779 aa17.67■□□□□ 0.42
LINC00116-203ENST00000611969 SPDYE2BA6NHP3 402 aa17.66■□□□□ 0.42
LINC00116-203ENST00000611969 SPDYE6P0CI01 402 aa17.66■□□□□ 0.42
LINC00116-203ENST00000611969 IGHMBP2P38935 993 aaKnown RBP17.66■□□□□ 0.42
LINC00116-203ENST00000611969 IREB2P48200 963 aaKnown RBP17.66■□□□□ 0.42
LINC00116-203ENST00000611969 OTUD7BQ6GQQ9 843 aa17.66■□□□□ 0.42
LINC00116-203ENST00000611969 UBE3BQ7Z3V4 1068 aa17.66■□□□□ 0.42
LINC00116-203ENST00000611969 CNKSR2Q8WXI2 1034 aa17.66■□□□□ 0.42
LINC00116-203ENST00000611969 OPTNQ96CV9 577 aa17.66■□□□□ 0.42
LINC00116-203ENST00000611969 PRMT6Q96LA8 375 aaPredicted RBP17.66■□□□□ 0.42
LINC00116-203ENST00000611969 JAG2Q9Y219 1238 aa17.66■□□□□ 0.42
LINC00116-203ENST00000611969 PI4KAP2A4QPH2 592 aa17.65■□□□□ 0.42
LINC00116-203ENST00000611969 ITGA6P23229 1130 aa17.65■□□□□ 0.42
LINC00116-203ENST00000611969 SUPT20HL1Q3ZLR7 823 aa17.65■□□□□ 0.42
LINC00116-203ENST00000611969 CDAN1Q8IWY9 1227 aa17.65■□□□□ 0.42
LINC00116-203ENST00000611969 ANKRD13AQ8IZ07 590 aa17.65■□□□□ 0.42
LINC00116-203ENST00000611969 PI4KAP1Q8N8J0 262 aa17.65■□□□□ 0.42
LINC00116-203ENST00000611969 BRI3BPQ8WY22 251 aa17.65■□□□□ 0.42
LINC00116-203ENST00000611969 MS4A4AQ96JQ5 239 aa17.65■□□□□ 0.42
LINC00116-203ENST00000611969 UNCXA6NJT0 531 aa17.64■□□□□ 0.41
LINC00116-203ENST00000611969 NEURL1BA8MQ27 555 aa17.64■□□□□ 0.41
LINC00116-203ENST00000611969 KCNJ4P48050 445 aa17.64■□□□□ 0.41
LINC00116-203ENST00000611969 CHRNDQ07001 517 aa17.64■□□□□ 0.41
LINC00116-203ENST00000611969 RASA3Q14644 834 aa17.64■□□□□ 0.41
LINC00116-203ENST00000611969 SLC4A8Q2Y0W8 1093 aa17.64■□□□□ 0.41
LINC00116-203ENST00000611969 KSR2Q6VAB6 950 aa17.64■□□□□ 0.41
LINC00116-203ENST00000611969 CHRDL2Q6WN34 429 aa17.64■□□□□ 0.41
LINC00116-203ENST00000611969 SH3TC2Q8TF17 1288 aa17.64■□□□□ 0.41
LINC00116-203ENST00000611969 ARHGAP39Q9C0H5 1083 aa17.64■□□□□ 0.41
LINC00116-203ENST00000611969 ANKRD2Q9GZV1 360 aa17.64■□□□□ 0.41
LINC00116-203ENST00000611969 IFT57Q9NWB7 429 aa17.64■□□□□ 0.41
LINC00116-203ENST00000611969 TAF1CQ15572 869 aaPredicted RBP17.63■□□□□ 0.41
LINC00116-203ENST00000611969 FAM43AQ8N2R8 423 aa17.63■□□□□ 0.41
LINC00116-203ENST00000611969 H7C1W4 665 aa17.62■□□□□ 0.41
LINC00116-203ENST00000611969 MYO1BO43795 1136 aa17.62■□□□□ 0.41
LINC00116-203ENST00000611969 TAF5LO75529 589 aa17.62■□□□□ 0.41
LINC00116-203ENST00000611969 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
LINC00116-203ENST00000611969 TSPYL6Q8N831 410 aa17.62■□□□□ 0.41
LINC00116-203ENST00000611969 SHISA4Q96DD7 197 aa17.62■□□□□ 0.41
LINC00116-203ENST00000611969 MPHOSPH8Q99549 860 aa17.62■□□□□ 0.41
LINC00116-203ENST00000611969 CCL15-CCL14A0A0B4J2E2 113 aa17.61■□□□□ 0.41
LINC00116-203ENST00000611969 GNAI1P63096 354 aa17.61■□□□□ 0.41
LINC00116-203ENST00000611969 CCL15Q16663 113 aa17.61■□□□□ 0.41
LINC00116-203ENST00000611969 CCDC30Q5VVM6 783 aa17.61■□□□□ 0.41
LINC00116-203ENST00000611969 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.61■□□□□ 0.41
LINC00116-203ENST00000611969 NBPF11Q86T75 865 aa17.61■□□□□ 0.41
LINC00116-203ENST00000611969 HELBQ8NG08 1087 aaPredicted RBP17.61■□□□□ 0.41
LINC00116-203ENST00000611969 COL6A3P12111 3177 aa17.61■□□□□ 0.41
LINC00116-203ENST00000611969 CASP7P55210 303 aa17.6■□□□□ 0.41
LINC00116-203ENST00000611969 NEXNQ0ZGT2 675 aa17.6■□□□□ 0.41
LINC00116-203ENST00000611969 VGLL4Q14135 290 aa17.6■□□□□ 0.41
LINC00116-203ENST00000611969 PLA2G12BQ9BX93 195 aa17.6■□□□□ 0.41
LINC00116-203ENST00000611969 RBM27Q9P2N5 1060 aaKnown RBP17.6■□□□□ 0.41
LINC00116-203ENST00000611969 IL1R1P14778 569 aa17.59■□□□□ 0.41
LINC00116-203ENST00000611969 RBM5P52756 815 aaKnown RBP eCLIP17.59■□□□□ 0.41
LINC00116-203ENST00000611969 SPDYE2Q495Y8 402 aa17.59■□□□□ 0.41
LINC00116-203ENST00000611969 C15orf52Q6ZUT6 534 aaKnown RBP17.59■□□□□ 0.41
LINC00116-203ENST00000611969 G2E3Q7L622 706 aa17.59■□□□□ 0.41
LINC00116-203ENST00000611969 TEPSINQ96N21 525 aa17.59■□□□□ 0.41
LINC00116-203ENST00000611969 CHMP4AQ9BY43 222 aa17.59■□□□□ 0.41
LINC00116-203ENST00000611969 ZFYVE28Q9HCC9 887 aa17.59■□□□□ 0.41
LINC00116-203ENST00000611969 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
LINC00116-203ENST00000611969 CSF1RP07333 972 aa17.58■□□□□ 0.4
LINC00116-203ENST00000611969 GCKRQ14397 625 aa17.58■□□□□ 0.4
LINC00116-203ENST00000611969 ZNF70Q9UC06 446 aaPredicted RBP17.58■□□□□ 0.4
LINC00116-203ENST00000611969 MGAMO43451 1857 aa17.57■□□□□ 0.4
LINC00116-203ENST00000611969 APAF1O14727 1248 aa17.57■□□□□ 0.4
LINC00116-203ENST00000611969 ECM2O94769 699 aaPredicted RBP17.57■□□□□ 0.4
LINC00116-203ENST00000611969 GTF2A2P52657 109 aa17.57■□□□□ 0.4
LINC00116-203ENST00000611969 FKBP1AP62942 108 aaKnown RBP17.57■□□□□ 0.4
LINC00116-203ENST00000611969 ZNF804AQ7Z570 1209 aa17.57■□□□□ 0.4
LINC00116-203ENST00000611969 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.57■□□□□ 0.48e-8■□□□□ 9.6
LINC00116-203ENST00000611969 TMEM39BQ9GZU3 492 aa17.57■□□□□ 0.4
LINC00116-203ENST00000611969 TDRD3Q9H7E2 651 aaKnown RBP17.57■□□□□ 0.4
LINC00116-203ENST00000611969 LACTBP83111 547 aaPredicted RBP17.56■□□□□ 0.4
LINC00116-203ENST00000611969 ARHGEF6Q15052 776 aa17.56■□□□□ 0.4
LINC00116-203ENST00000611969 MTFR1Q15390 333 aa17.56■□□□□ 0.4
LINC00116-203ENST00000611969 TCP10L2B9ZVM9 353 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms