RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 PHKG2P15735 406 aa23.72■■□□□ 1.39
SSBP3-216ENST00000610401 CFAP100Q494V2 611 aa23.72■■□□□ 1.39
SSBP3-216ENST00000610401 E4F1Q66K89 784 aaPredicted RBP23.72■■□□□ 1.39
SSBP3-216ENST00000610401 FMR1NBQ8N0W7 255 aaPredicted RBP23.72■■□□□ 1.39
SSBP3-216ENST00000610401 KIAA1468Q9P260 1216 aa23.72■■□□□ 1.39
SSBP3-216ENST00000610401 DPF2Q92785 391 aa23.72■■□□□ 1.39
SSBP3-216ENST00000610401 UTYO14607 1347 aa23.71■■□□□ 1.39
SSBP3-216ENST00000610401 CACNA1FO60840 1977 aa23.71■■□□□ 1.39
SSBP3-216ENST00000610401 NAA16Q6N069 864 aaPredicted RBP23.71■■□□□ 1.39
SSBP3-216ENST00000610401 ATG9AQ7Z3C6 839 aa23.71■■□□□ 1.39
SSBP3-216ENST00000610401 POLR3GO15318 223 aaPredicted RBP23.71■■□□□ 1.39
SSBP3-216ENST00000610401 PNOCQ13519 176 aa23.71■■□□□ 1.39
SSBP3-216ENST00000610401 TTC39AQ5SRH9 613 aa23.71■■□□□ 1.39
SSBP3-216ENST00000610401 UTP14CQ5TAP6 766 aaKnown RBP23.71■■□□□ 1.39
SSBP3-216ENST00000610401 RALYLQ86SE5 291 aaKnown RBP23.71■■□□□ 1.39
SSBP3-216ENST00000610401 PUS7LQ9H0K6 701 aaKnown RBP23.71■■□□□ 1.39
SSBP3-216ENST00000610401 DDX41Q9UJV9 622 aaKnown RBP23.71■■□□□ 1.39
SSBP3-216ENST00000610401 CTAGE5O15320 804 aa23.71■■□□□ 1.39
SSBP3-216ENST00000610401 CYP27B1O15528 508 aa23.71■■□□□ 1.39
SSBP3-216ENST00000610401 FGAP02671 866 aa23.71■■□□□ 1.39
SSBP3-216ENST00000610401 ZSWIM4Q9H7M6 989 aa23.71■■□□□ 1.39
SSBP3-216ENST00000610401 PODXL2Q9NZ53 605 aa23.71■■□□□ 1.39
SSBP3-216ENST00000610401 URI1O94763 535 aaPredicted RBP23.7■■□□□ 1.38
SSBP3-216ENST00000610401 EXOSC10Q01780 885 aaKnown RBP23.7■■□□□ 1.38
SSBP3-216ENST00000610401 LINC00301Q8NCQ3 95 aa23.7■■□□□ 1.38
SSBP3-216ENST00000610401 UTP14AQ9BVJ6 771 aaKnown RBP23.7■■□□□ 1.38
SSBP3-216ENST00000610401 SENP2Q9HC62 589 aa23.7■■□□□ 1.38
SSBP3-216ENST00000610401 TOMM22Q9NS69 142 aa23.7■■□□□ 1.38
SSBP3-216ENST00000610401 FAM89AQ96GI7 184 aa23.7■■□□□ 1.38
SSBP3-216ENST00000610401 A0A0G2JS52 829 aa23.69■■□□□ 1.38
SSBP3-216ENST00000610401 CMTR1Q8N1G2 835 aaKnown RBP23.69■■□□□ 1.38
SSBP3-216ENST00000610401 PPP1R13BQ96KQ4 1090 aa23.69■■□□□ 1.38
SSBP3-216ENST00000610401 RNF113AO15541 343 aaKnown RBP23.69■■□□□ 1.38
SSBP3-216ENST00000610401 SLU7O95391 586 aaKnown RBP23.69■■□□□ 1.38
SSBP3-216ENST00000610401 ZAP70P43403 619 aa23.69■■□□□ 1.38
SSBP3-216ENST00000610401 FEZ1Q99689 392 aa23.69■■□□□ 1.38
SSBP3-216ENST00000610401 TMEM232C9JQI7 657 aa23.68■■□□□ 1.38
SSBP3-216ENST00000610401 PFKFB1P16118 471 aa23.68■■□□□ 1.38
SSBP3-216ENST00000610401 NBPF26B4DH59 902 aa23.68■■□□□ 1.38
SSBP3-216ENST00000610401 WDHD1O75717 1129 aaPredicted RBP23.68■■□□□ 1.38
SSBP3-216ENST00000610401 HMGB1P09429 215 aaKnown RBP23.68■■□□□ 1.38
SSBP3-216ENST00000610401 NBPF14Q5TI25 921 aa23.68■■□□□ 1.38
SSBP3-216ENST00000610401 NBPF10Q6P3W6 841 aaKnown RBP23.68■■□□□ 1.38
SSBP3-216ENST00000610401 NYAP1Q6ZVC0 841 aa23.68■■□□□ 1.38
SSBP3-216ENST00000610401 ANKLE2Q86XL3 938 aa23.68■■□□□ 1.38
SSBP3-216ENST00000610401 NBPF15Q8N660 670 aa23.68■■□□□ 1.38
SSBP3-216ENST00000610401 ERBB3P21860 1342 aa23.68■■□□□ 1.38
SSBP3-216ENST00000610401 ZNF827Q17R98 1081 aa23.68■■□□□ 1.38
SSBP3-216ENST00000610401 ARHGAP29Q52LW3 1261 aa23.68■■□□□ 1.38
SSBP3-216ENST00000610401 CEP126Q9P2H0 1117 aa23.68■■□□□ 1.38
SSBP3-216ENST00000610401 FOXN1O15353 648 aa23.67■■□□□ 1.38
SSBP3-216ENST00000610401 GPTP24298 496 aa23.67■■□□□ 1.38
SSBP3-216ENST00000610401 ZMYM1Q5SVZ6 1142 aa23.67■■□□□ 1.38
SSBP3-216ENST00000610401 IDH1O75874 414 aaKnown RBP23.67■■□□□ 1.38
SSBP3-216ENST00000610401 FOXO4P98177 505 aa23.67■■□□□ 1.38
SSBP3-216ENST00000610401 MYSM1Q5VVJ2 828 aa23.67■■□□□ 1.38
SSBP3-216ENST00000610401 IFNL2Q8IZJ0 200 aa23.67■■□□□ 1.38
SSBP3-216ENST00000610401 ALDH8A1Q9H2A2 487 aaPredicted RBP23.67■■□□□ 1.38
SSBP3-216ENST00000610401 PDIA4P13667 645 aaKnown RBP23.66■■□□□ 1.38
SSBP3-216ENST00000610401 RBM6P78332 1123 aaKnown RBP23.66■■□□□ 1.38
SSBP3-216ENST00000610401 ADALQ6DHV7 355 aa23.66■■□□□ 1.38
SSBP3-216ENST00000610401 SARM1Q6SZW1 724 aa23.66■■□□□ 1.38
SSBP3-216ENST00000610401 CREBRFQ8IUR6 639 aa23.66■■□□□ 1.38
SSBP3-216ENST00000610401 ZNF397Q8NF99 534 aaPredicted RBP23.66■■□□□ 1.38
SSBP3-216ENST00000610401 CHMP4CQ96CF2 233 aa23.66■■□□□ 1.38
SSBP3-216ENST00000610401 LLPHQ9BRT6 129 aaKnown RBP23.66■■□□□ 1.38
SSBP3-216ENST00000610401 SEC31AO94979 1220 aaKnown RBP23.66■■□□□ 1.38
SSBP3-216ENST00000610401 IMMTQ16891 758 aaKnown RBP23.66■■□□□ 1.38
SSBP3-216ENST00000610401 KRT222Q8N1A0 295 aa23.66■■□□□ 1.38
SSBP3-216ENST00000610401 TRHP20396 242 aaPredicted RBP23.66■■□□□ 1.38
SSBP3-216ENST00000610401 FANCCQ00597 558 aa23.66■■□□□ 1.38
SSBP3-216ENST00000610401 NFXL1Q6ZNB6 911 aa23.66■■□□□ 1.38
SSBP3-216ENST00000610401 MROH7-TTC4A0A0A0MT08 1334 aa23.65■■□□□ 1.38
SSBP3-216ENST00000610401 SNAP23O00161 211 aa23.65■■□□□ 1.38
SSBP3-216ENST00000610401 RRP12Q5JTH9 1297 aaKnown RBP23.65■■□□□ 1.38
SSBP3-216ENST00000610401 UBASH3AP57075 661 aa23.65■■□□□ 1.38
SSBP3-216ENST00000610401 PROSER2Q86WR7 435 aaPredicted RBP23.65■■□□□ 1.38
SSBP3-216ENST00000610401 ZNF446Q9NWS9 450 aa23.65■■□□□ 1.38
SSBP3-216ENST00000610401 CWC25Q9NXE8 425 aaPredicted RBP23.65■■□□□ 1.38
SSBP3-216ENST00000610401 TRMT44Q8IYL2 757 aaKnown RBP23.64■■□□□ 1.38
SSBP3-216ENST00000610401 HELBQ8NG08 1087 aaPredicted RBP23.64■■□□□ 1.38
SSBP3-216ENST00000610401 CDC25BP30305 580 aa23.64■■□□□ 1.38
SSBP3-216ENST00000610401 CCDC57Q2TAC2 916 aa23.64■■□□□ 1.38
SSBP3-216ENST00000610401 ZKSCAN3Q9BRR0 538 aa23.64■■□□□ 1.38
SSBP3-216ENST00000610401 LTN1O94822 1766 aa23.64■■□□□ 1.37
SSBP3-216ENST00000610401 ZNF213O14771 459 aa23.64■■□□□ 1.37
SSBP3-216ENST00000610401 COBLO75128 1261 aa23.64■■□□□ 1.37
SSBP3-216ENST00000610401 SYKP43405 635 aa23.64■■□□□ 1.37
SSBP3-216ENST00000610401 ZFP91Q96JP5 570 aaPredicted RBP23.64■■□□□ 1.37
SSBP3-216ENST00000610401 GRAMD1CQ8IYS0 662 aa23.63■■□□□ 1.37
SSBP3-216ENST00000610401 FBXO18Q8NFZ0 1043 aa23.63■■□□□ 1.37
SSBP3-216ENST00000610401 XAGE2Q96GT9 111 aa23.63■■□□□ 1.37
SSBP3-216ENST00000610401 HELLSQ9NRZ9 838 aa23.63■■□□□ 1.37
SSBP3-216ENST00000610401 ANO1Q5XXA6 986 aa23.63■■□□□ 1.37
SSBP3-216ENST00000610401 ALG1Q9BT22 464 aa23.63■■□□□ 1.37
SSBP3-216ENST00000610401 DSCC1Q9BVC3 393 aa23.63■■□□□ 1.37
SSBP3-216ENST00000610401 HEG1Q9ULI3 1381 aa23.63■■□□□ 1.37
SSBP3-216ENST00000610401 B4E1Z4 1266 aa23.62■■□□□ 1.37
SSBP3-216ENST00000610401 EYA2O00167 538 aa23.62■■□□□ 1.37
SSBP3-216ENST00000610401 CCDC158Q5M9N0 1113 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms