RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 TRIM28Q13263 835 aaKnown RBP16.52■□□□□ 0.24
LINC01278-206ENST00000610088 MTFR1Q15390 333 aa16.52■□□□□ 0.24
LINC01278-206ENST00000610088 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.52■□□□□ 0.24
LINC01278-206ENST00000610088 CWC25Q9NXE8 425 aaPredicted RBP16.52■□□□□ 0.24
LINC01278-206ENST00000610088 PODXL2Q9NZ53 605 aa16.52■□□□□ 0.24
LINC01278-206ENST00000610088 COL4A1P02462 1669 aa16.51■□□□□ 0.23
LINC01278-206ENST00000610088 PPP1R12BO60237 982 aaPredicted RBP16.51■□□□□ 0.23
LINC01278-206ENST00000610088 ECM2O94769 699 aaPredicted RBP16.51■□□□□ 0.23
LINC01278-206ENST00000610088 GJA5P36382 358 aa16.51■□□□□ 0.23
LINC01278-206ENST00000610088 SF3B3Q15393 1217 aaKnown RBP16.51■□□□□ 0.23
LINC01278-206ENST00000610088 WDR63Q8IWG1 891 aa16.51■□□□□ 0.23
LINC01278-206ENST00000610088 ZBTB38Q8NAP3 1195 aaPredicted RBP16.51■□□□□ 0.23
LINC01278-206ENST00000610088 CCDC191Q8NCU4 936 aa16.51■□□□□ 0.23
LINC01278-206ENST00000610088 VCANP13611 3396 aa16.51■□□□□ 0.23
LINC01278-206ENST00000610088 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
LINC01278-206ENST00000610088 TAF1CQ15572 869 aaPredicted RBP16.5■□□□□ 0.23
LINC01278-206ENST00000610088 METTL22Q9BUU2 404 aaPredicted RBP16.5■□□□□ 0.23
LINC01278-206ENST00000610088 ARHGAP39Q9C0H5 1083 aa16.5■□□□□ 0.23
LINC01278-206ENST00000610088 ZFYVE28Q9HCC9 887 aa16.5■□□□□ 0.23
LINC01278-206ENST00000610088 MAP3K2Q9Y2U5 619 aa16.5■□□□□ 0.23
LINC01278-206ENST00000610088 EVI5O60447 810 aa16.49■□□□□ 0.23
LINC01278-206ENST00000610088 SLC4A2P04920 1241 aa16.49■□□□□ 0.23
LINC01278-206ENST00000610088 KIF22Q14807 665 aa16.49■□□□□ 0.23
LINC01278-206ENST00000610088 KSR2Q6VAB6 950 aa16.49■□□□□ 0.23
LINC01278-206ENST00000610088 PODNQ7Z5L7 613 aa16.49■□□□□ 0.23
LINC01278-206ENST00000610088 NKX2-3Q8TAU0 364 aa16.49■□□□□ 0.23
LINC01278-206ENST00000610088 DEFB129Q9H1M3 183 aa16.49■□□□□ 0.23
LINC01278-206ENST00000610088 PRDM6Q9NQX0 595 aa16.49■□□□□ 0.23
LINC01278-206ENST00000610088 FANCIQ9NVI1 1328 aa16.48■□□□□ 0.23
LINC01278-206ENST00000610088 PI4KAP2A4QPH2 592 aa16.48■□□□□ 0.23
LINC01278-206ENST00000610088 MAP3K11Q16584 847 aa16.48■□□□□ 0.23
LINC01278-206ENST00000610088 PI4KAP1Q8N8J0 262 aa16.48■□□□□ 0.23
LINC01278-206ENST00000610088 TESPA1A2RU30 521 aaPredicted RBP16.47■□□□□ 0.23
LINC01278-206ENST00000610088 PCCAP05165 728 aaPredicted RBP16.47■□□□□ 0.23
LINC01278-206ENST00000610088 CCDC152Q4G0S7 254 aa16.47■□□□□ 0.23
LINC01278-206ENST00000610088 UBE2Q1Q7Z7E8 422 aa16.47■□□□□ 0.23
LINC01278-206ENST00000610088 MYH16Q9H6N6 1097 aa16.47■□□□□ 0.23
LINC01278-206ENST00000610088 SEC31BQ9NQW1 1179 aa16.47■□□□□ 0.23
LINC01278-206ENST00000610088 MTMR10Q9NXD2 777 aa16.47■□□□□ 0.23
LINC01278-206ENST00000610088 PDE8AO60658 829 aa16.46■□□□□ 0.23
LINC01278-206ENST00000610088 FARP2O94887 1054 aaPredicted RBP16.46■□□□□ 0.23
LINC01278-206ENST00000610088 GJA8P48165 433 aa16.46■□□□□ 0.23
LINC01278-206ENST00000610088 IREB2P48200 963 aaKnown RBP16.46■□□□□ 0.23
LINC01278-206ENST00000610088 FKBP5Q13451 457 aaPredicted RBP16.46■□□□□ 0.23
LINC01278-206ENST00000610088 DACT2Q5SW24 774 aa16.46■□□□□ 0.23
LINC01278-206ENST00000610088 GPR153Q6NV75 609 aa16.46■□□□□ 0.23
LINC01278-206ENST00000610088 ELP3Q9H9T3 547 aa16.46■□□□□ 0.23
LINC01278-206ENST00000610088 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
LINC01278-206ENST00000610088 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
LINC01278-206ENST00000610088 MYO3BQ8WXR4 1341 aa16.45■□□□□ 0.22
LINC01278-206ENST00000610088 CCL5P13501 91 aa16.44■□□□□ 0.22
LINC01278-206ENST00000610088 KIAA0825Q8IV33 1275 aa16.44■□□□□ 0.22
LINC01278-206ENST00000610088 BRI3BPQ8WY22 251 aa16.44■□□□□ 0.22
LINC01278-206ENST00000610088 OPTNQ96CV9 577 aa16.44■□□□□ 0.22
LINC01278-206ENST00000610088 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
LINC01278-206ENST00000610088 RNF208Q9H0X6 261 aa16.44■□□□□ 0.22
LINC01278-206ENST00000610088 BIN2Q9UBW5 565 aaPredicted RBP16.44■□□□□ 0.22
LINC01278-206ENST00000610088 PSME4Q14997 1843 aa16.44■□□□□ 0.22
LINC01278-206ENST00000610088 SSC5DA1L4H1 1573 aa16.43■□□□□ 0.22
LINC01278-206ENST00000610088 CCL15-CCL14A0A0B4J2E2 113 aa16.43■□□□□ 0.22
LINC01278-206ENST00000610088 GJB1P08034 283 aa16.43■□□□□ 0.22
LINC01278-206ENST00000610088 ATP2B4P23634 1241 aa16.43■□□□□ 0.22
LINC01278-206ENST00000610088 LACTBP83111 547 aaPredicted RBP16.43■□□□□ 0.22
LINC01278-206ENST00000610088 FLIIQ13045 1269 aa16.43■□□□□ 0.22
LINC01278-206ENST00000610088 CCL15Q16663 113 aa16.43■□□□□ 0.22
LINC01278-206ENST00000610088 SUPT20HL1Q3ZLR7 823 aa16.43■□□□□ 0.22
LINC01278-206ENST00000610088 G2E3Q7L622 706 aa16.43■□□□□ 0.22
LINC01278-206ENST00000610088 ANKRD13AQ8IZ07 590 aa16.43■□□□□ 0.22
LINC01278-206ENST00000610088 MS4A4AQ96JQ5 239 aa16.43■□□□□ 0.22
LINC01278-206ENST00000610088 XDHP47989 1333 aa16.43■□□□□ 0.22
LINC01278-206ENST00000610088 UNCXA6NJT0 531 aa16.42■□□□□ 0.22
LINC01278-206ENST00000610088 WDHD1O75717 1129 aaPredicted RBP16.42■□□□□ 0.22
LINC01278-206ENST00000610088 CWF19L2Q2TBE0 894 aaKnown RBP16.42■□□□□ 0.22
LINC01278-206ENST00000610088 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
LINC01278-206ENST00000610088 FAM43AQ8N2R8 423 aa16.42■□□□□ 0.22
LINC01278-206ENST00000610088 RAET1EQ8TD07 263 aa16.42■□□□□ 0.22
LINC01278-206ENST00000610088 COL1A1P02452 1464 aaPredicted RBP16.42■□□□□ 0.22
LINC01278-206ENST00000610088 ZSWIM8A7E2V4 1837 aa16.41■□□□□ 0.22
LINC01278-206ENST00000610088 VAMP4O75379 141 aa16.41■□□□□ 0.22
LINC01278-206ENST00000610088 USP2O75604 605 aaPredicted RBP16.41■□□□□ 0.22
LINC01278-206ENST00000610088 COL9A1P20849 921 aa16.41■□□□□ 0.22
LINC01278-206ENST00000610088 PRMT2P55345 433 aa16.41■□□□□ 0.22
LINC01278-206ENST00000610088 NBPF12Q5TAG4 269 aaPredicted RBP16.41■□□□□ 0.22
LINC01278-206ENST00000610088 STRIP1Q5VSL9 837 aa16.41■□□□□ 0.22
LINC01278-206ENST00000610088 DNAAF4Q8WXU2 420 aa16.41■□□□□ 0.22
LINC01278-206ENST00000610088 CDC5LQ99459 802 aaKnown RBP16.41■□□□□ 0.22
LINC01278-206ENST00000610088 NEURL1BA8MQ27 555 aa16.4■□□□□ 0.22
LINC01278-206ENST00000610088 GNRH1P01148 92 aa16.4■□□□□ 0.22
LINC01278-206ENST00000610088 IGKV5-2P06315 115 aa16.4■□□□□ 0.22
LINC01278-206ENST00000610088 GRK4P32298 578 aa16.4■□□□□ 0.22
LINC01278-206ENST00000610088 BCAMP50895 628 aa16.4■□□□□ 0.22
LINC01278-206ENST00000610088 CTSWP56202 376 aa16.4■□□□□ 0.22
LINC01278-206ENST00000610088 DLGAP5Q15398 846 aa16.4■□□□□ 0.22
LINC01278-206ENST00000610088 UBE3BQ7Z3V4 1068 aa16.4■□□□□ 0.22
LINC01278-206ENST00000610088 U2AF1L4Q8WU68 220 aaKnown RBP16.4■□□□□ 0.22
LINC01278-206ENST00000610088 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
LINC01278-206ENST00000610088 ZBED3Q96IU2 234 aaPredicted RBP16.4■□□□□ 0.22
LINC01278-206ENST00000610088 RIPOR2Q9Y4F9 1068 aa16.4■□□□□ 0.22
LINC01278-206ENST00000610088 SPTBN5Q9NRC6 3674 aaKnown RBP16.39■□□□□ 0.21
LINC01278-206ENST00000610088 LAMB1P07942 1786 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms