RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ANGEL1Q9UNK9 670 aaKnown RBP7.62□□□□□ -1.19
SMCHD1-213ENST00000609587 SMNDC1O75940 238 aaKnown RBP eCLIP7.61□□□□□ -1.19
SMCHD1-213ENST00000609587 ITGB5P18084 799 aa7.61□□□□□ -1.19
SMCHD1-213ENST00000609587 CCDC39Q9UFE4 941 aa7.61□□□□□ -1.19
SMCHD1-213ENST00000609587 EGFL7Q9UHF1 273 aa7.61□□□□□ -1.19
SMCHD1-213ENST00000609587 SOWAHDA6NJG2 315 aa7.6□□□□□ -1.19
SMCHD1-213ENST00000609587 PRNPP04156 253 aa7.6□□□□□ -1.19
SMCHD1-213ENST00000609587 ZNF211Q13398 564 aaPredicted RBP7.6□□□□□ -1.19
SMCHD1-213ENST00000609587 SF3B2Q13435 895 aaKnown RBP7.6□□□□□ -1.19
SMCHD1-213ENST00000609587 COL19A1Q14993 1142 aa7.6□□□□□ -1.19
SMCHD1-213ENST00000609587 SND1Q7KZF4 910 aaKnown RBP eCLIP7.6□□□□□ -1.19
SMCHD1-213ENST00000609587 KLHDC7BQ96G42 594 aa7.6□□□□□ -1.19
SMCHD1-213ENST00000609587 ANO2Q9NQ90 1003 aa7.6□□□□□ -1.19
SMCHD1-213ENST00000609587 SH2B1Q9NRF2 756 aaPredicted RBP7.6□□□□□ -1.19
SMCHD1-213ENST00000609587 HIF3AQ9Y2N7 669 aa7.6□□□□□ -1.19
SMCHD1-213ENST00000609587 SART1O43290 800 aaKnown RBP7.59□□□□□ -1.19
SMCHD1-213ENST00000609587 FKBP4Q02790 459 aaKnown RBP eCLIP7.59□□□□□ -1.19
SMCHD1-213ENST00000609587 HYAL2Q12891 473 aa7.59□□□□□ -1.19
SMCHD1-213ENST00000609587 NOM1Q5C9Z4 860 aaKnown RBP7.59□□□□□ -1.19
SMCHD1-213ENST00000609587 GPR152Q8TDT2 470 aa7.59□□□□□ -1.19
SMCHD1-213ENST00000609587 SEC31BQ9NQW1 1179 aa7.59□□□□□ -1.19
SMCHD1-213ENST00000609587 FNDC3AQ9Y2H6 1198 aaKnown RBP7.59□□□□□ -1.19
SMCHD1-213ENST00000609587 CCDC9Q9Y3X0 531 aaKnown RBP7.59□□□□□ -1.19
SMCHD1-213ENST00000609587 H3BRB1 525 aa7.58□□□□□ -1.2
SMCHD1-213ENST00000609587 ICMTO60725 284 aa7.58□□□□□ -1.2
SMCHD1-213ENST00000609587 FAM13AO94988 1023 aa7.58□□□□□ -1.2
SMCHD1-213ENST00000609587 F13BP05160 661 aa7.58□□□□□ -1.2
SMCHD1-213ENST00000609587 FOSL1P15407 271 aa7.58□□□□□ -1.2
SMCHD1-213ENST00000609587 MPSTP25325 297 aa7.58□□□□□ -1.2
SMCHD1-213ENST00000609587 EIF1AXP47813 144 aaKnown RBP7.58□□□□□ -1.2
SMCHD1-213ENST00000609587 ALKBH2Q6NS38 261 aa7.58□□□□□ -1.2
SMCHD1-213ENST00000609587 FAM117BQ6P1L5 589 aa7.58□□□□□ -1.2
SMCHD1-213ENST00000609587 VSIG10LQ86VR7 867 aa7.58□□□□□ -1.2
SMCHD1-213ENST00000609587 RNF208Q9H0X6 261 aa7.58□□□□□ -1.2
SMCHD1-213ENST00000609587 TUT1Q9H6E5 874 aaKnown RBP7.58□□□□□ -1.2
SMCHD1-213ENST00000609587 UBAP1LF5GYI3 381 aa7.57□□□□□ -1.2
SMCHD1-213ENST00000609587 KIF4AO95239 1232 aa7.57□□□□□ -1.2
SMCHD1-213ENST00000609587 RPLP1P05386 114 aaKnown RBP7.57□□□□□ -1.2
SMCHD1-213ENST00000609587 MTMR3Q13615 1198 aa7.57□□□□□ -1.2
SMCHD1-213ENST00000609587 SGO2Q562F6 1265 aa7.57□□□□□ -1.2
SMCHD1-213ENST00000609587 ATCAYQ86WG3 371 aa7.57□□□□□ -1.2
SMCHD1-213ENST00000609587 GLYCTKQ8IVS8 523 aa7.57□□□□□ -1.2
SMCHD1-213ENST00000609587 ASIC4Q96FT7 647 aa7.57□□□□□ -1.2
SMCHD1-213ENST00000609587 KRTAP4-11Q9BYQ6 195 aa7.57□□□□□ -1.2
SMCHD1-213ENST00000609587 BIN2Q9UBW5 565 aaPredicted RBP7.57□□□□□ -1.2
SMCHD1-213ENST00000609587 LEMD3Q9Y2U8 911 aa7.57□□□□□ -1.2
SMCHD1-213ENST00000609587 MAP4P27816 1152 aaKnown RBP7.56□□□□□ -1.2
SMCHD1-213ENST00000609587 NLRP12P59046 1061 aa7.56□□□□□ -1.2
SMCHD1-213ENST00000609587 FDX2Q6P4F2 183 aa7.56□□□□□ -1.2
SMCHD1-213ENST00000609587 SHISA5Q8N114 240 aa7.56□□□□□ -1.2
SMCHD1-213ENST00000609587 FBXL6Q8N531 539 aa7.56□□□□□ -1.2
SMCHD1-213ENST00000609587 NUDT16Q96DE0 195 aaKnown RBP7.56□□□□□ -1.2
SMCHD1-213ENST00000609587 SPACA7Q96KW9 195 aa7.56□□□□□ -1.2
SMCHD1-213ENST00000609587 PBX4Q9BYU1 374 aa7.56□□□□□ -1.2
SMCHD1-213ENST00000609587 H3BRJ5 948 aa7.55□□□□□ -1.2
SMCHD1-213ENST00000609587 GAS2O43903 313 aaKnown RBP7.55□□□□□ -1.2
SMCHD1-213ENST00000609587 PTPRAP18433 802 aa7.55□□□□□ -1.2
SMCHD1-213ENST00000609587 MZF1P28698 734 aaPredicted RBP7.55□□□□□ -1.2
SMCHD1-213ENST00000609587 MFAP1P55081 439 aaKnown RBP7.55□□□□□ -1.2
SMCHD1-213ENST00000609587 CCDC27Q2M243 656 aa7.55□□□□□ -1.2
SMCHD1-213ENST00000609587 PDE12Q6L8Q7 609 aaKnown RBP7.55□□□□□ -1.2
SMCHD1-213ENST00000609587 EDEM1Q92611 657 aa7.55□□□□□ -1.2
SMCHD1-213ENST00000609587 FBXL18Q96ME1 805 aa7.55□□□□□ -1.2
SMCHD1-213ENST00000609587 RUSC1Q9BVN2 902 aa7.55□□□□□ -1.2
SMCHD1-213ENST00000609587 ADAM19Q9H013 955 aa7.55□□□□□ -1.2
SMCHD1-213ENST00000609587 ATG3Q9NT62 314 aa7.55□□□□□ -1.2
SMCHD1-213ENST00000609587 PDGFAP04085 211 aa7.54□□□□□ -1.2
SMCHD1-213ENST00000609587 CYP2E1P05181 493 aaPredicted RBP7.54□□□□□ -1.2
SMCHD1-213ENST00000609587 PIP4K2BP78356 416 aa7.54□□□□□ -1.2
SMCHD1-213ENST00000609587 CPSF6Q16630 551 aaKnown RBP eCLIP7.54□□□□□ -1.2
SMCHD1-213ENST00000609587 XKR5Q6UX68 686 aa7.54□□□□□ -1.2
SMCHD1-213ENST00000609587 POP1Q99575 1024 aaKnown RBP7.54□□□□□ -1.2
SMCHD1-213ENST00000609587 PCSK2P16519 638 aa7.53□□□□□ -1.2
SMCHD1-213ENST00000609587 JUNBP17275 347 aaPredicted RBP7.53□□□□□ -1.2
SMCHD1-213ENST00000609587 DNM1Q05193 864 aaKnown RBP7.53□□□□□ -1.2
SMCHD1-213ENST00000609587 ECM1Q16610 540 aa7.53□□□□□ -1.2
SMCHD1-213ENST00000609587 TP53INP2Q8IXH6 220 aa7.53□□□□□ -1.2
SMCHD1-213ENST00000609587 CEP120Q8N960 986 aa7.53□□□□□ -1.2
SMCHD1-213ENST00000609587 OSBPL1AQ9BXW6 950 aa7.53□□□□□ -1.2
SMCHD1-213ENST00000609587 USP5P45974 858 aa7.52□□□□□ -1.21
SMCHD1-213ENST00000609587 WNT8BQ93098 351 aa7.52□□□□□ -1.21
SMCHD1-213ENST00000609587 ABI2Q9NYB9 513 aaPredicted RBP7.52□□□□□ -1.21
SMCHD1-213ENST00000609587 FZD6O60353 706 aa7.51□□□□□ -1.21
SMCHD1-213ENST00000609587 AAMPQ13685 434 aa7.51□□□□□ -1.21
SMCHD1-213ENST00000609587 TTC39BQ5VTQ0 682 aaPredicted RBP7.51□□□□□ -1.21
SMCHD1-213ENST00000609587 SPOCD1Q6ZMY3 1216 aa7.51□□□□□ -1.21
SMCHD1-213ENST00000609587 ZNF438Q7Z4V0 828 aa7.51□□□□□ -1.21
SMCHD1-213ENST00000609587 GIMAP7Q8NHV1 300 aa7.51□□□□□ -1.21
SMCHD1-213ENST00000609587 GGNBP2Q9H3C7 697 aa7.51□□□□□ -1.21
SMCHD1-213ENST00000609587 ELP3Q9H9T3 547 aa7.51□□□□□ -1.21
SMCHD1-213ENST00000609587 POLIQ9UNA4 740 aa7.51□□□□□ -1.21
SMCHD1-213ENST00000609587 TIAF1O95411 115 aa7.5□□□□□ -1.21
SMCHD1-213ENST00000609587 PAPLNO95428 1278 aa7.5□□□□□ -1.21
SMCHD1-213ENST00000609587 ACPPP15309 386 aa7.5□□□□□ -1.21
SMCHD1-213ENST00000609587 ZNF648Q5T619 568 aaPredicted RBP7.5□□□□□ -1.21
SMCHD1-213ENST00000609587 TTC16Q8NEE8 873 aa7.5□□□□□ -1.21
SMCHD1-213ENST00000609587 OSGEPQ9NPF4 335 aa7.5□□□□□ -1.21
SMCHD1-213ENST00000609587 PAK6Q9NQU5 681 aaPredicted RBP7.5□□□□□ -1.21
SMCHD1-213ENST00000609587 TMEM63CQ9P1W3 806 aa7.5□□□□□ -1.21
SMCHD1-213ENST00000609587 MEGF11A6BM72 1044 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 221.7 ms