RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 ZSWIM8A7E2V4 1837 aa7.58□□□□□ -1.2
LINC00649-213ENST00000608431 ECM29Q5VYK3 1845 aa7.58□□□□□ -1.2
LINC00649-213ENST00000608431 IGF2BP3O00425 579 aaKnown RBP eCLIP7.58□□□□□ -1.2
LINC00649-213ENST00000608431 GJA8P48165 433 aa7.58□□□□□ -1.2
LINC00649-213ENST00000608431 PRMT2P55345 433 aa7.58□□□□□ -1.2
LINC00649-213ENST00000608431 MAP3K9P80192 1104 aa7.58□□□□□ -1.2
LINC00649-213ENST00000608431 MAP3K12Q12852 859 aa7.58□□□□□ -1.2
LINC00649-213ENST00000608431 SCARF1Q14162 830 aa7.58□□□□□ -1.2
LINC00649-213ENST00000608431 WASHC4Q2M389 1173 aa7.58□□□□□ -1.2
LINC00649-213ENST00000608431 FAM109BQ6ICB4 259 aaPredicted RBP7.58□□□□□ -1.2
LINC00649-213ENST00000608431 TDHQ8IZJ6 230 aa7.58□□□□□ -1.2
LINC00649-213ENST00000608431 SH3TC2Q8TF17 1288 aa7.58□□□□□ -1.2
LINC00649-213ENST00000608431 NLRP3Q96P20 1036 aa7.58□□□□□ -1.2
LINC00649-213ENST00000608431 ASTN2O75129 1339 aaPredicted RBP7.57□□□□□ -1.2
LINC00649-213ENST00000608431 GNRH1P01148 92 aa7.57□□□□□ -1.2
LINC00649-213ENST00000608431 GJB1P08034 283 aa7.57□□□□□ -1.2
LINC00649-213ENST00000608431 BCAMP50895 628 aa7.57□□□□□ -1.2
LINC00649-213ENST00000608431 HNRNPUQ00839 825 aaKnown RBP eCLIP7.57□□□□□ -1.2
LINC00649-213ENST00000608431 PTPN12Q05209 780 aaKnown RBP7.57□□□□□ -1.2
LINC00649-213ENST00000608431 TMC4Q7Z404 712 aa7.57□□□□□ -1.2
LINC00649-213ENST00000608431 SLC51AQ86UW1 340 aa7.57□□□□□ -1.2
LINC00649-213ENST00000608431 SLC10A4Q96EP9 437 aa7.57□□□□□ -1.2
LINC00649-213ENST00000608431 CARD14Q9BXL6 1004 aa7.57□□□□□ -1.2
LINC00649-213ENST00000608431 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.57□□□□□ -1.2
LINC00649-213ENST00000608431 MGAMO43451 1857 aa7.57□□□□□ -1.2
LINC00649-213ENST00000608431 IRS2Q9Y4H2 1338 aa7.56□□□□□ -1.2
LINC00649-213ENST00000608431 SSC5DA1L4H1 1573 aa7.56□□□□□ -1.2
LINC00649-213ENST00000608431 ZMYND10O75800 440 aa7.56□□□□□ -1.2
LINC00649-213ENST00000608431 FARP2O94887 1054 aaPredicted RBP7.56□□□□□ -1.2
LINC00649-213ENST00000608431 ZNF280AP59817 542 aaPredicted RBP7.56□□□□□ -1.2
LINC00649-213ENST00000608431 KIF22Q14807 665 aa7.56□□□□□ -1.2
LINC00649-213ENST00000608431 LDLRAD1Q5T700 205 aa7.56□□□□□ -1.2
LINC00649-213ENST00000608431 AGBL3Q8NEM8 1001 aa7.56□□□□□ -1.2
LINC00649-213ENST00000608431 DBNDD1Q9H9R9 158 aa7.56□□□□□ -1.2
LINC00649-213ENST00000608431 ABCC4O15439 1325 aa7.55□□□□□ -1.2
LINC00649-213ENST00000608431 UNCXA6NJT0 531 aa7.55□□□□□ -1.2
LINC00649-213ENST00000608431 ECE2O60344 883 aa7.55□□□□□ -1.2
LINC00649-213ENST00000608431 WDHD1O75717 1129 aaPredicted RBP7.55□□□□□ -1.2
LINC00649-213ENST00000608431 VIL1P09327 827 aaKnown RBP7.55□□□□□ -1.2
LINC00649-213ENST00000608431 HLFQ16534 295 aa7.55□□□□□ -1.2
LINC00649-213ENST00000608431 MAFAQ8NHW3 353 aaPredicted RBP7.55□□□□□ -1.2
LINC00649-213ENST00000608431 GUCD1Q96NT3 240 aa7.55□□□□□ -1.2
LINC00649-213ENST00000608431 MYOZ2Q9NPC6 264 aa7.55□□□□□ -1.2
LINC00649-213ENST00000608431 MYO9BQ13459 2157 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 ERVV-1B6SEH8 477 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 GPR37O15354 613 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 OSBPP22059 807 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 PIP4K2AP48426 406 aaPredicted RBP7.54□□□□□ -1.2
LINC00649-213ENST00000608431 CAP1Q01518 475 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 MTFR1Q15390 333 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 TJAP1Q5JTD0 557 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 PRAMEF18Q5VWM3 479 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 DDX46Q7L014 1031 aaKnown RBP7.54□□□□□ -1.2
LINC00649-213ENST00000608431 PPP1R42Q7Z4L9 355 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 WNK4Q96J92 1243 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 EYA3Q99504 573 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 ZFYVE28Q9HCC9 887 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 ANGEL1Q9UNK9 670 aaKnown RBP7.54□□□□□ -1.2
LINC00649-213ENST00000608431 HCN4Q9Y3Q4 1203 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 USP16Q9Y5T5 823 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 RTL9Q8NET4 1388 aa7.54□□□□□ -1.2
LINC00649-213ENST00000608431 ZBED9Q6R2W3 1325 aa7.53□□□□□ -1.2
LINC00649-213ENST00000608431 OTOFQ9HC10 1997 aa7.53□□□□□ -1.2
LINC00649-213ENST00000608431 GRXCR2A6NFK2 248 aa7.53□□□□□ -1.2
LINC00649-213ENST00000608431 USP17L8P0C7I0 530 aa7.53□□□□□ -1.2
LINC00649-213ENST00000608431 UBXN2AP68543 259 aa7.53□□□□□ -1.2
LINC00649-213ENST00000608431 RNF208Q9H0X6 261 aa7.53□□□□□ -1.2
LINC00649-213ENST00000608431 COL1A1P02452 1464 aaPredicted RBP7.53□□□□□ -1.2
LINC00649-213ENST00000608431 SPTBN4Q9H254 2564 aa7.53□□□□□ -1.2
LINC00649-213ENST00000608431 FAM205AQ6ZU69 1335 aa7.52□□□□□ -1.2
LINC00649-213ENST00000608431 C6orf229H3BNL8 230 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 RIMBP2O15034 1052 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 PPP1R12BO60237 982 aaPredicted RBP7.52□□□□□ -1.21
LINC00649-213ENST00000608431 NTSR2O95665 410 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 SNRPA1P09661 255 aaKnown RBP7.52□□□□□ -1.21
LINC00649-213ENST00000608431 CCL5P13501 91 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 GRK4P32298 578 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 GRAPQ13588 217 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 PRKG1Q13976 671 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 TAF1CQ15572 869 aaPredicted RBP7.52□□□□□ -1.21
LINC00649-213ENST00000608431 MTHFSDQ2M296 383 aaKnown RBP7.52□□□□□ -1.21
LINC00649-213ENST00000608431 PARP10Q53GL7 1025 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 ZNF697Q5TEC3 545 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 RSBN1LQ6PCB5 846 aaPredicted RBP7.52□□□□□ -1.21
LINC00649-213ENST00000608431 GRAPLQ8TC17 118 aaPredicted RBP7.52□□□□□ -1.21
LINC00649-213ENST00000608431 U2AF1L4Q8WU68 220 aaKnown RBP7.52□□□□□ -1.21
LINC00649-213ENST00000608431 C1QTNF1Q9BXJ1 281 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 UBE2OQ9C0C9 1292 aaKnown RBP7.52□□□□□ -1.21
LINC00649-213ENST00000608431 SLC24A3Q9HC58 644 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 KCNQ5Q9NR82 932 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 WDFY4Q6ZS81 3184 aa7.52□□□□□ -1.21
LINC00649-213ENST00000608431 ZDBF2Q9HCK1 2354 aa7.51□□□□□ -1.21
LINC00649-213ENST00000608431 BTBD11A6QL63 1104 aa7.51□□□□□ -1.21
LINC00649-213ENST00000608431 NBPF26B4DH59 902 aa7.51□□□□□ -1.21
LINC00649-213ENST00000608431 SGPL1O95470 568 aa7.51□□□□□ -1.21
LINC00649-213ENST00000608431 HOXB3P14651 431 aaPredicted RBP7.51□□□□□ -1.21
LINC00649-213ENST00000608431 GPTP24298 496 aa7.51□□□□□ -1.21
LINC00649-213ENST00000608431 HOXD10P28358 340 aa7.51□□□□□ -1.21
LINC00649-213ENST00000608431 IRX6P78412 446 aaPredicted RBP7.51□□□□□ -1.21
LINC00649-213ENST00000608431 MAP3K11Q16584 847 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms