RNA–Protein interactions for RNA: ENST00000607923.5

CTCFL-213, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-213ENST00000607923 ZNF213O14771 459 aa16.1■□□□□ 0.17
CTCFL-213ENST00000607923 ITGA6P23229 1130 aa16.1■□□□□ 0.17
CTCFL-213ENST00000607923 PIGBQ92521 554 aa16.1■□□□□ 0.17
CTCFL-213ENST00000607923 ZNF396Q96N95 335 aaPredicted RBP16.1■□□□□ 0.17
CTCFL-213ENST00000607923 LLPHQ9BRT6 129 aaKnown RBP16.1■□□□□ 0.17
CTCFL-213ENST00000607923 PCDHA7Q9UN72 937 aa16.1■□□□□ 0.17
CTCFL-213ENST00000607923 SLC9C2Q5TAH2 1124 aa16.09■□□□□ 0.17
CTCFL-213ENST00000607923 MYL10Q9BUA6 226 aa16.09■□□□□ 0.17
CTCFL-213ENST00000607923 KIF1AQ12756 1690 aa16.09■□□□□ 0.17
CTCFL-213ENST00000607923 MARCKSP29966 332 aaPredicted RBP16.09■□□□□ 0.17
CTCFL-213ENST00000607923 CHAF1AQ13111 956 aaPredicted RBP16.09■□□□□ 0.17
CTCFL-213ENST00000607923 NAA16Q6N069 864 aaPredicted RBP16.09■□□□□ 0.17
CTCFL-213ENST00000607923 AOPEPQ8N6M6 819 aa16.09■□□□□ 0.17
CTCFL-213ENST00000607923 CACTINQ8WUQ7 758 aaKnown RBP16.09■□□□□ 0.17
CTCFL-213ENST00000607923 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
CTCFL-213ENST00000607923 RCOR1Q9UKL0 485 aa16.09■□□□□ 0.17
CTCFL-213ENST00000607923 MCAMP43121 646 aa16.08■□□□□ 0.17
CTCFL-213ENST00000607923 ISCA1Q9BUE6 129 aa16.08■□□□□ 0.17
CTCFL-213ENST00000607923 GPR108Q9NPR9 543 aa16.08■□□□□ 0.17
CTCFL-213ENST00000607923 COL18A1P39060 1754 aa16.08■□□□□ 0.17
CTCFL-213ENST00000607923 SNW1Q13573 536 aaKnown RBP16.08■□□□□ 0.16
CTCFL-213ENST00000607923 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
CTCFL-213ENST00000607923 SENP2Q9HC62 589 aa16.08■□□□□ 0.16
CTCFL-213ENST00000607923 SPTLC3Q9NUV7 552 aa16.08■□□□□ 0.16
CTCFL-213ENST00000607923 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.16
CTCFL-213ENST00000607923 AKAP2Q9Y2D5 859 aa16.08■□□□□ 0.16
CTCFL-213ENST00000607923 ADAMTSL3P82987 1691 aa16.08■□□□□ 0.16
CTCFL-213ENST00000607923 NDUFA8P51970 172 aa16.08■□□□□ 0.16
CTCFL-213ENST00000607923 TDRD7Q8NHU6 1098 aaKnown RBP16.08■□□□□ 0.16
CTCFL-213ENST00000607923 PHKBQ93100 1093 aa16.08■□□□□ 0.16
CTCFL-213ENST00000607923 ANTXR2P58335 489 aa16.07■□□□□ 0.16
CTCFL-213ENST00000607923 MICU3Q86XE3 530 aa16.07■□□□□ 0.16
CTCFL-213ENST00000607923 CCDC82Q8N4S0 544 aa16.07■□□□□ 0.16
CTCFL-213ENST00000607923 TOMM22Q9NS69 142 aa16.07■□□□□ 0.16
CTCFL-213ENST00000607923 TRMT1Q9NXH9 659 aaKnown RBP16.07■□□□□ 0.16
CTCFL-213ENST00000607923 UBE2Q2LH0YL09 131 aa16.07■□□□□ 0.16
CTCFL-213ENST00000607923 CIAO1O76071 339 aa16.07■□□□□ 0.16
CTCFL-213ENST00000607923 ZRSR1Q15695 479 aaKnown RBP16.07■□□□□ 0.16
CTCFL-213ENST00000607923 TPD52L1Q16890 204 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-213ENST00000607923 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-213ENST00000607923 ZNF274Q96GC6 653 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-213ENST00000607923 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
CTCFL-213ENST00000607923 RFX7Q2KHR2 1363 aa16.07■□□□□ 0.16
CTCFL-213ENST00000607923 LAMA4Q16363 1823 aa16.07■□□□□ 0.16
CTCFL-213ENST00000607923 KIF28PB7ZC32 967 aa16.06■□□□□ 0.16
CTCFL-213ENST00000607923 GNL2Q13823 731 aaKnown RBP16.06■□□□□ 0.16
CTCFL-213ENST00000607923 STX1AQ16623 288 aa16.06■□□□□ 0.16
CTCFL-213ENST00000607923 PLA2G4DQ86XP0 818 aa16.06■□□□□ 0.16
CTCFL-213ENST00000607923 ZNF710Q8N1W2 664 aa16.06■□□□□ 0.16
CTCFL-213ENST00000607923 NCOA7Q8NI08 942 aa16.06■□□□□ 0.16
CTCFL-213ENST00000607923 APPBP2Q92624 585 aa16.06■□□□□ 0.16
CTCFL-213ENST00000607923 B4E1Z4 1266 aa16.06■□□□□ 0.16
CTCFL-213ENST00000607923 FAM160A1Q05DH4 1040 aa16.06■□□□□ 0.16
CTCFL-213ENST00000607923 RBM43Q6ZSC3 357 aaKnown RBP16.06■□□□□ 0.16
CTCFL-213ENST00000607923 PRIMPOLQ96LW4 560 aa16.06■□□□□ 0.16
CTCFL-213ENST00000607923 PHKA1P46020 1223 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 TRDNQ13061 729 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 IQCB1Q15051 598 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 RRP12Q5JTH9 1297 aaKnown RBP16.05■□□□□ 0.16
CTCFL-213ENST00000607923 SYNE3Q6ZMZ3 975 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 NFXL1Q6ZNB6 911 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 ZMYND15Q9H091 742 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 BCL2L12Q9HB09 334 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 PIH1D3Q9NQM4 214 aaKnown RBP16.05■□□□□ 0.16
CTCFL-213ENST00000607923 SLAIN2Q9P270 581 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 IRS4O14654 1257 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-213ENST00000607923 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-213ENST00000607923 MRPS27Q92552 414 aaKnown RBP16.05■□□□□ 0.16
CTCFL-213ENST00000607923 BTG4Q9NY30 223 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 HPS5Q9UPZ3 1129 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 ZBTB1Q9Y2K1 713 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 TPM3P06753 285 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 NAA30Q147X3 362 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-213ENST00000607923 PTPN21Q16825 1174 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 AGXT2Q9BYV1 514 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 ATG3Q9NT62 314 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 WWC3Q9ULE0 1092 aa16.05■□□□□ 0.16
CTCFL-213ENST00000607923 IQSEC3Q9UPP2 1182 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-213ENST00000607923 STARD3NLO95772 234 aa16.04■□□□□ 0.16
CTCFL-213ENST00000607923 PCCAP05165 728 aaPredicted RBP16.04■□□□□ 0.16
CTCFL-213ENST00000607923 TNNT1P13805 278 aa16.04■□□□□ 0.16
CTCFL-213ENST00000607923 CYB5R4Q7L1T6 521 aa16.04■□□□□ 0.16
CTCFL-213ENST00000607923 TBC1D10CQ8IV04 446 aa16.04■□□□□ 0.16
CTCFL-213ENST00000607923 TTLL11Q8NHH1 800 aa16.04■□□□□ 0.16
CTCFL-213ENST00000607923 CARD10Q9BWT7 1032 aa16.04■□□□□ 0.16
CTCFL-213ENST00000607923 SALL1Q9NSC2 1324 aa16.04■□□□□ 0.16
CTCFL-213ENST00000607923 ANKRD18BA2A2Z9 1011 aa16.04■□□□□ 0.16
CTCFL-213ENST00000607923 USP27XA6NNY8 438 aa16.04■□□□□ 0.16
CTCFL-213ENST00000607923 MB21D2Q8IYB1 491 aaPredicted RBP16.04■□□□□ 0.16
CTCFL-213ENST00000607923 ZKSCAN3Q9BRR0 538 aa16.04■□□□□ 0.16
CTCFL-213ENST00000607923 ZNF532Q9HCE3 1301 aa16.03■□□□□ 0.16
CTCFL-213ENST00000607923 LRRFIP1Q32MZ4 808 aaKnown RBP16.03■□□□□ 0.16
CTCFL-213ENST00000607923 DPCR1Q3MIW9 517 aa16.03■□□□□ 0.16
CTCFL-213ENST00000607923 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
CTCFL-213ENST00000607923 CPDO75976 1380 aa16.03■□□□□ 0.16
CTCFL-213ENST00000607923 SPTLC2O15270 562 aa16.03■□□□□ 0.16
CTCFL-213ENST00000607923 SMC2O95347 1197 aa16.03■□□□□ 0.16
CTCFL-213ENST00000607923 CTDSPL2Q05D32 466 aa16.03■□□□□ 0.16
CTCFL-213ENST00000607923 NLRP10Q86W26 655 aa16.03■□□□□ 0.16
CTCFL-213ENST00000607923 ENGASEQ8NFI3 743 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms