RNA–Protein interactions for RNA: ENST00000607339.1

UCHL3-205, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-205ENST00000607339 IRAK1P51617 712 aa8.6□□□□□ -1.03
UCHL3-205ENST00000607339 NLRP12P59046 1061 aa8.6□□□□□ -1.03
UCHL3-205ENST00000607339 ZDHHC13Q8IUH4 622 aa8.6□□□□□ -1.03
UCHL3-205ENST00000607339 TRIM42Q8IWZ5 723 aa8.6□□□□□ -1.03
UCHL3-205ENST00000607339 OSMRQ99650 979 aa8.6□□□□□ -1.03
UCHL3-205ENST00000607339 YIPF2Q9BWQ6 316 aa8.6□□□□□ -1.03
UCHL3-205ENST00000607339 AMOTL2Q9Y2J4 779 aa8.6□□□□□ -1.03
UCHL3-205ENST00000607339 NFKBIEO00221 500 aa8.59□□□□□ -1.03
UCHL3-205ENST00000607339 BMP3P12645 472 aa8.59□□□□□ -1.03
UCHL3-205ENST00000607339 NUTM2GQ5VZR2 741 aa8.59□□□□□ -1.03
UCHL3-205ENST00000607339 BEND4Q6ZU67 534 aa8.59□□□□□ -1.03
UCHL3-205ENST00000607339 BHLHE41Q9C0J9 482 aaPredicted RBP8.59□□□□□ -1.03
UCHL3-205ENST00000607339 CHRDQ9H2X0 955 aa8.59□□□□□ -1.03
UCHL3-205ENST00000607339 GGNBP2Q9H3C7 697 aa8.59□□□□□ -1.03
UCHL3-205ENST00000607339 POLIQ9UNA4 740 aa8.59□□□□□ -1.03
UCHL3-205ENST00000607339 TNFRSF21O75509 655 aa8.58□□□□□ -1.04
UCHL3-205ENST00000607339 TGFB1P01137 390 aa8.58□□□□□ -1.04
UCHL3-205ENST00000607339 DDX54Q8TDD1 881 aaKnown RBP8.58□□□□□ -1.04
UCHL3-205ENST00000607339 NXPE3Q969Y0 559 aa8.58□□□□□ -1.04
UCHL3-205ENST00000607339 SUGCTQ9HAC7 445 aa8.58□□□□□ -1.04
UCHL3-205ENST00000607339 PREPP48147 710 aa8.57□□□□□ -1.04
UCHL3-205ENST00000607339 FKBP4Q02790 459 aaKnown RBP eCLIP8.57□□□□□ -1.04
UCHL3-205ENST00000607339 ZKSCAN3Q9BRR0 538 aa8.57□□□□□ -1.04
UCHL3-205ENST00000607339 KRTAP9-9Q9BYP9 154 aa8.57□□□□□ -1.04
UCHL3-205ENST00000607339 KRTAP9-4Q9BYQ2 154 aa8.57□□□□□ -1.04
UCHL3-205ENST00000607339 GOLGA2P5Q9HBQ8 144 aa8.57□□□□□ -1.04
UCHL3-205ENST00000607339 COL17A1Q9UMD9 1497 aaPredicted RBP8.57□□□□□ -1.04
UCHL3-205ENST00000607339 TMEM88BA6NKF7 163 aa8.56□□□□□ -1.04
UCHL3-205ENST00000607339 DDX3YO15523 660 aaKnown RBP8.56□□□□□ -1.04
UCHL3-205ENST00000607339 HNRNPUQ00839 825 aaKnown RBP eCLIP8.56□□□□□ -1.04
UCHL3-205ENST00000607339 CCDC82Q8N4S0 544 aa8.56□□□□□ -1.04
UCHL3-205ENST00000607339 SMG8Q8ND04 991 aaKnown RBP8.56□□□□□ -1.04
UCHL3-205ENST00000607339 METTL22Q9BUU2 404 aaPredicted RBP8.56□□□□□ -1.04
UCHL3-205ENST00000607339 ATG3Q9NT62 314 aa8.56□□□□□ -1.04
UCHL3-205ENST00000607339 HMX2A2RU54 273 aa8.55□□□□□ -1.04
UCHL3-205ENST00000607339 TXKP42681 527 aa8.55□□□□□ -1.04
UCHL3-205ENST00000607339 GP2P55259 537 aaKnown RBP8.55□□□□□ -1.04
UCHL3-205ENST00000607339 ASAP3Q8TDY4 903 aa8.55□□□□□ -1.04
UCHL3-205ENST00000607339 USP26Q9BXU7 913 aa8.55□□□□□ -1.04
UCHL3-205ENST00000607339 EGFL7Q9UHF1 273 aa8.55□□□□□ -1.04
UCHL3-205ENST00000607339 USTQ9Y2C2 406 aa8.55□□□□□ -1.04
UCHL3-205ENST00000607339 EREGO14944 169 aa8.54□□□□□ -1.04
UCHL3-205ENST00000607339 SPINK2P20155 84 aa8.54□□□□□ -1.04
UCHL3-205ENST00000607339 MAP4P27816 1152 aaKnown RBP8.54□□□□□ -1.04
UCHL3-205ENST00000607339 PAOXQ6QHF9 649 aa8.54□□□□□ -1.04
UCHL3-205ENST00000607339 ADAMTSL4Q6UY14 1074 aa8.54□□□□□ -1.04
UCHL3-205ENST00000607339 DTX1Q86Y01 620 aa8.54□□□□□ -1.04
UCHL3-205ENST00000607339 GJD3Q8N144 294 aa8.54□□□□□ -1.04
UCHL3-205ENST00000607339 TMPRSS13Q9BYE2 586 aa8.54□□□□□ -1.04
UCHL3-205ENST00000607339 ARID3CA6NKF2 412 aa8.53□□□□□ -1.04
UCHL3-205ENST00000607339 WNT11O96014 354 aa8.53□□□□□ -1.04
UCHL3-205ENST00000607339 ACPPP15309 386 aa8.53□□□□□ -1.04
UCHL3-205ENST00000607339 RXRBP28702 533 aa8.53□□□□□ -1.04
UCHL3-205ENST00000607339 VN1R5Q7Z5H4 357 aa8.53□□□□□ -1.04
UCHL3-205ENST00000607339 C12orf50Q8NA57 414 aaPredicted RBP8.53□□□□□ -1.04
UCHL3-205ENST00000607339 SHKBP1Q8TBC3 707 aa8.53□□□□□ -1.04
UCHL3-205ENST00000607339 PIM2Q9P1W9 311 aa8.53□□□□□ -1.04
UCHL3-205ENST00000607339 A6NHS1 94 aa8.52□□□□□ -1.05
UCHL3-205ENST00000607339 USP11P51784 963 aa8.52□□□□□ -1.05
UCHL3-205ENST00000607339 EXOSC6Q5RKV6 272 aaKnown RBP8.52□□□□□ -1.05
UCHL3-205ENST00000607339 LOC100289279A0A1B0GTE1 492 aa8.51□□□□□ -1.05
UCHL3-205ENST00000607339 SOX1O00570 391 aaPredicted RBP8.51□□□□□ -1.05
UCHL3-205ENST00000607339 TIAF1O95411 115 aa8.51□□□□□ -1.05
UCHL3-205ENST00000607339 ABL1P00519 1130 aa8.51□□□□□ -1.05
UCHL3-205ENST00000607339 CYP11A1P05108 521 aa8.51□□□□□ -1.05
UCHL3-205ENST00000607339 ESRRAP11474 423 aaPredicted RBP8.51□□□□□ -1.05
UCHL3-205ENST00000607339 PDE3BQ13370 1112 aa8.51□□□□□ -1.05
UCHL3-205ENST00000607339 KRTAP19-1Q8IUB9 90 aa8.51□□□□□ -1.05
UCHL3-205ENST00000607339 HHIPQ96QV1 700 aa8.51□□□□□ -1.05
UCHL3-205ENST00000607339 ZFYVE28Q9HCC9 887 aa8.51□□□□□ -1.05
UCHL3-205ENST00000607339 LEMD3Q9Y2U8 911 aa8.51□□□□□ -1.05
UCHL3-205ENST00000607339 GTF3C3Q9Y5Q9 886 aa8.51□□□□□ -1.05
UCHL3-205ENST00000607339 FZD6O60353 706 aa8.5□□□□□ -1.05
UCHL3-205ENST00000607339 PDE4CQ08493 712 aa8.5□□□□□ -1.05
UCHL3-205ENST00000607339 OSBPL1AQ9BXW6 950 aa8.5□□□□□ -1.05
UCHL3-205ENST00000607339 CLEC4MQ9H2X3 399 aaPredicted RBP8.5□□□□□ -1.05
UCHL3-205ENST00000607339 ANGEL1Q9UNK9 670 aaKnown RBP8.5□□□□□ -1.05
UCHL3-205ENST00000607339 KRTAP4-8A0A0G2JLE6 195 aa8.49□□□□□ -1.05
UCHL3-205ENST00000607339 FAM95CA0A1B0GW59 222 aa8.49□□□□□ -1.05
UCHL3-205ENST00000607339 PRR19A6NJB7 356 aa8.49□□□□□ -1.05
UCHL3-205ENST00000607339 WDR64B1ANS9 1081 aa8.49□□□□□ -1.05
UCHL3-205ENST00000607339 GSTM4Q03013 218 aa8.49□□□□□ -1.05
UCHL3-205ENST00000607339 MTMR3Q13615 1198 aa8.49□□□□□ -1.05
UCHL3-205ENST00000607339 FOXD3Q9UJU5 478 aaPredicted RBP8.49□□□□□ -1.05
UCHL3-205ENST00000607339 BRPF3Q9ULD4 1205 aa8.49□□□□□ -1.05
UCHL3-205ENST00000607339 NDUFB5O43674 189 aa8.48□□□□□ -1.05
UCHL3-205ENST00000607339 TRPA1O75762 1119 aa8.48□□□□□ -1.05
UCHL3-205ENST00000607339 MFSD14AQ96MC6 490 aa8.48□□□□□ -1.05
UCHL3-205ENST00000607339 CYP27A1Q02318 531 aa8.47□□□□□ -1.05
UCHL3-205ENST00000607339 PCDH1Q08174 1060 aa8.47□□□□□ -1.05
UCHL3-205ENST00000607339 MAP7Q14244 749 aa8.47□□□□□ -1.05
UCHL3-205ENST00000607339 SGO2Q562F6 1265 aa8.47□□□□□ -1.05
UCHL3-205ENST00000607339 GLYCTKQ8IVS8 523 aa8.47□□□□□ -1.05
UCHL3-205ENST00000607339 GALNT12Q8IXK2 581 aa8.47□□□□□ -1.05
UCHL3-205ENST00000607339 CITED4Q96RK1 184 aa8.47□□□□□ -1.05
UCHL3-205ENST00000607339 LIN7BQ9HAP6 207 aa8.47□□□□□ -1.05
UCHL3-205ENST00000607339 OAS3Q9Y6K5 1087 aaKnown RBP8.47□□□□□ -1.05
UCHL3-205ENST00000607339 MED26O95402 600 aa8.46□□□□□ -1.06
UCHL3-205ENST00000607339 FOSL1P15407 271 aa8.46□□□□□ -1.06
UCHL3-205ENST00000607339 PEAR1Q5VY43 1037 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms