RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	COBL	O75128	1261 aa		7.73	□□□□□ -1.17
LAMA4-222	ENST00000604740	BMP3	P12645	472 aa		7.73	□□□□□ -1.17
LAMA4-222	ENST00000604740	ZNF211	Q13398	564 aa	Predicted RBP	7.73	□□□□□ -1.17
LAMA4-222	ENST00000604740	SF3B2	Q13435	895 aa	Known RBP	7.73	□□□□□ -1.17
LAMA4-222	ENST00000604740	IKBKE	Q14164	716 aa		7.73	□□□□□ -1.17
LAMA4-222	ENST00000604740	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	7.73	□□□□□ -1.17
LAMA4-222	ENST00000604740	FAM20C	Q8IXL6	584 aa		7.73	□□□□□ -1.17
LAMA4-222	ENST00000604740	DBNDD2	Q9BQY9	259 aa		7.73	□□□□□ -1.17
LAMA4-222	ENST00000604740	GAS2	O43903	313 aa	Known RBP	7.72	□□□□□ -1.17
LAMA4-222	ENST00000604740	FZD6	O60353	706 aa		7.72	□□□□□ -1.17
LAMA4-222	ENST00000604740	FKBP4	Q02790	459 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
LAMA4-222	ENST00000604740	RNF43	Q68DV7	783 aa		7.72	□□□□□ -1.17
LAMA4-222	ENST00000604740	PHLDB3	Q6NSJ2	640 aa		7.72	□□□□□ -1.17
LAMA4-222	ENST00000604740	BEND4	Q6ZU67	534 aa		7.72	□□□□□ -1.17
LAMA4-222	ENST00000604740	ZDHHC13	Q8IUH4	622 aa		7.72	□□□□□ -1.17
LAMA4-222	ENST00000604740	USP26	Q9BXU7	913 aa		7.72	□□□□□ -1.17
LAMA4-222	ENST00000604740	LATS2	Q9NRM7	1088 aa		7.72	□□□□□ -1.17
LAMA4-222	ENST00000604740	AMOTL2	Q9Y2J4	779 aa		7.72	□□□□□ -1.17
LAMA4-222	ENST00000604740	SOX1	O00570	391 aa	Predicted RBP	7.71	□□□□□ -1.18
LAMA4-222	ENST00000604740	MED26	O95402	600 aa		7.71	□□□□□ -1.18
LAMA4-222	ENST00000604740	VN1R5	Q7Z5H4	357 aa		7.71	□□□□□ -1.18
LAMA4-222	ENST00000604740	CLEC10A	Q8IUN9	316 aa		7.71	□□□□□ -1.18
LAMA4-222	ENST00000604740	KRTAP9-2	Q9BYQ4	174 aa		7.71	□□□□□ -1.18
LAMA4-222	ENST00000604740	CCDC87	Q9NVE4	849 aa		7.71	□□□□□ -1.18
LAMA4-222	ENST00000604740	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.7	□□□□□ -1.18
LAMA4-222	ENST00000604740	GRIK1	P39086	918 aa		7.7	□□□□□ -1.18
LAMA4-222	ENST00000604740	GJD3	Q8N144	294 aa		7.7	□□□□□ -1.18
LAMA4-222	ENST00000604740	FAM83C	Q9BQN1	747 aa		7.7	□□□□□ -1.18
LAMA4-222	ENST00000604740	BHLHE41	Q9C0J9	482 aa	Predicted RBP	7.7	□□□□□ -1.18
LAMA4-222	ENST00000604740	HIF3A	Q9Y2N7	669 aa		7.7	□□□□□ -1.18
LAMA4-222	ENST00000604740	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	7.69	□□□□□ -1.18
LAMA4-222	ENST00000604740	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.69	□□□□□ -1.18
LAMA4-222	ENST00000604740	NUTM2G	Q5VZR2	741 aa		7.69	□□□□□ -1.18
LAMA4-222	ENST00000604740	MEGF11	A6BM72	1044 aa		7.68	□□□□□ -1.18
LAMA4-222	ENST00000604740	METTL12	A8MUP2	240 aa		7.68	□□□□□ -1.18
LAMA4-222	ENST00000604740	POLR3D	P05423	398 aa	Predicted RBP	7.68	□□□□□ -1.18
LAMA4-222	ENST00000604740	C12orf50	Q8NA57	414 aa	Predicted RBP	7.68	□□□□□ -1.18
LAMA4-222	ENST00000604740	SHKBP1	Q8TBC3	707 aa		7.68	□□□□□ -1.18
LAMA4-222	ENST00000604740	ZFYVE28	Q9HCC9	887 aa		7.68	□□□□□ -1.18
LAMA4-222	ENST00000604740	KRTAP9-6	A0A140TA67	174 aa		7.67	□□□□□ -1.18
LAMA4-222	ENST00000604740	LOC100289279	A0A1B0GTE1	492 aa		7.67	□□□□□ -1.18
LAMA4-222	ENST00000604740	ESRRA	P11474	423 aa	Predicted RBP	7.67	□□□□□ -1.18
LAMA4-222	ENST00000604740	RXRB	P28702	533 aa		7.67	□□□□□ -1.18
LAMA4-222	ENST00000604740	GSTM4	Q03013	218 aa		7.67	□□□□□ -1.18
LAMA4-222	ENST00000604740	SGO2	Q562F6	1265 aa		7.67	□□□□□ -1.18
LAMA4-222	ENST00000604740	MCTP1	Q6DN14	999 aa		7.67	□□□□□ -1.18
LAMA4-222	ENST00000604740	INTS5	Q6P9B9	1019 aa	Known RBP	7.67	□□□□□ -1.18
LAMA4-222	ENST00000604740	TMPRSS13	Q9BYE2	586 aa		7.67	□□□□□ -1.18
LAMA4-222	ENST00000604740	SOX17	Q9H6I2	414 aa	Predicted RBP	7.67	□□□□□ -1.18
LAMA4-222	ENST00000604740	CYP4F12	Q9HCS2	524 aa		7.67	□□□□□ -1.18
LAMA4-222	ENST00000604740	PRR19	A6NJB7	356 aa		7.66	□□□□□ -1.18
LAMA4-222	ENST00000604740	MAP4	P27816	1152 aa	Known RBP	7.66	□□□□□ -1.18
LAMA4-222	ENST00000604740	MFSD14A	Q96MC6	490 aa		7.66	□□□□□ -1.18
LAMA4-222	ENST00000604740	WDR64	B1ANS9	1081 aa		7.65	□□□□□ -1.18
LAMA4-222	ENST00000604740		H3BRB1	525 aa		7.65	□□□□□ -1.18
LAMA4-222	ENST00000604740	DLGAP3	O95886	979 aa		7.65	□□□□□ -1.18
LAMA4-222	ENST00000604740	SPINK2	P20155	84 aa		7.65	□□□□□ -1.18
LAMA4-222	ENST00000604740	B4GALNT3	Q6L9W6	998 aa		7.65	□□□□□ -1.18
LAMA4-222	ENST00000604740	C14orf37	Q86TY3	774 aa		7.65	□□□□□ -1.18
LAMA4-222	ENST00000604740	SMG8	Q8ND04	991 aa	Known RBP	7.65	□□□□□ -1.18
LAMA4-222	ENST00000604740	TUT1	Q9H6E5	874 aa	Known RBP	7.65	□□□□□ -1.18
LAMA4-222	ENST00000604740	GP2	P55259	537 aa	Known RBP	7.64	□□□□□ -1.19
LAMA4-222	ENST00000604740	GLYCTK	Q8IVS8	523 aa		7.64	□□□□□ -1.19
LAMA4-222	ENST00000604740	SUGCT	Q9HAC7	445 aa		7.64	□□□□□ -1.19
LAMA4-222	ENST00000604740	EGFL7	Q9UHF1	273 aa		7.64	□□□□□ -1.19
LAMA4-222	ENST00000604740	BRPF3	Q9ULD4	1205 aa		7.64	□□□□□ -1.19
LAMA4-222	ENST00000604740	UST	Q9Y2C2	406 aa		7.64	□□□□□ -1.19
LAMA4-222	ENST00000604740	ICMT	O60725	284 aa		7.63	□□□□□ -1.19
LAMA4-222	ENST00000604740	TIAF1	O95411	115 aa		7.63	□□□□□ -1.19
LAMA4-222	ENST00000604740	DRD2	P14416	443 aa		7.63	□□□□□ -1.19
LAMA4-222	ENST00000604740	SERPINB4	P48594	390 aa		7.63	□□□□□ -1.19
LAMA4-222	ENST00000604740	IRAK1	P51617	712 aa		7.63	□□□□□ -1.19
LAMA4-222	ENST00000604740	EXOSC6	Q5RKV6	272 aa	Known RBP	7.63	□□□□□ -1.19
LAMA4-222	ENST00000604740	FBXL6	Q8N531	539 aa		7.63	□□□□□ -1.19
LAMA4-222	ENST00000604740	LIN7B	Q9HAP6	207 aa		7.63	□□□□□ -1.19
LAMA4-222	ENST00000604740	OAS3	Q9Y6K5	1087 aa	Known RBP	7.63	□□□□□ -1.19
LAMA4-222	ENST00000604740		A0A096LPE4	126 aa		7.62	□□□□□ -1.19
LAMA4-222	ENST00000604740		A0A1W2PP55	124 aa		7.62	□□□□□ -1.19
LAMA4-222	ENST00000604740		A0A1W2PPZ6	126 aa		7.62	□□□□□ -1.19
LAMA4-222	ENST00000604740	USP11	P51784	963 aa		7.62	□□□□□ -1.19
LAMA4-222	ENST00000604740	PCDH1	Q08174	1060 aa		7.62	□□□□□ -1.19
LAMA4-222	ENST00000604740	DTX1	Q86Y01	620 aa		7.62	□□□□□ -1.19
LAMA4-222	ENST00000604740	CCNJL	Q8IV13	435 aa		7.62	□□□□□ -1.19
LAMA4-222	ENST00000604740	GALNT12	Q8IXK2	581 aa		7.62	□□□□□ -1.19
LAMA4-222	ENST00000604740	GIMAP7	Q8NHV1	300 aa		7.62	□□□□□ -1.19
LAMA4-222	ENST00000604740	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.62	□□□□□ -1.19
LAMA4-222	ENST00000604740	ATG3	Q9NT62	314 aa		7.62	□□□□□ -1.19
LAMA4-222	ENST00000604740	FAM95C	A0A1B0GW59	222 aa		7.61	□□□□□ -1.19
LAMA4-222	ENST00000604740	EIF4EBP3	O60516	100 aa	Predicted RBP	7.61	□□□□□ -1.19
LAMA4-222	ENST00000604740	ADAMTS4	O75173	837 aa		7.61	□□□□□ -1.19
LAMA4-222	ENST00000604740	GRIA4	P48058	902 aa		7.61	□□□□□ -1.19
LAMA4-222	ENST00000604740	NFKBIB	Q15653	356 aa		7.61	□□□□□ -1.19
LAMA4-222	ENST00000604740	SPRED3	Q2MJR0	410 aa		7.61	□□□□□ -1.19
LAMA4-222	ENST00000604740	FBLIM1	Q8WUP2	373 aa		7.61	□□□□□ -1.19
LAMA4-222	ENST00000604740	PIM2	Q9P1W9	311 aa		7.61	□□□□□ -1.19
LAMA4-222	ENST00000604740	COL17A1	Q9UMD9	1497 aa	Predicted RBP	7.61	□□□□□ -1.19
LAMA4-222	ENST00000604740	NDUFB5	O43674	189 aa		7.6	□□□□□ -1.19
LAMA4-222	ENST00000604740	F13B	P05160	661 aa		7.6	□□□□□ -1.19
LAMA4-222	ENST00000604740	HOXA10	P31260	410 aa	Predicted RBP	7.6	□□□□□ -1.19
LAMA4-222	ENST00000604740	USPL1	Q5W0Q7	1092 aa		7.6	□□□□□ -1.19

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