RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 DEFB115Q30KQ5 88 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 TMEM164Q5U3C3 297 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 CTU1Q7Z7A3 348 aaKnown RBP3.78□□□□□ -1.8
VCAM1-205ENST00000603679 PRR7Q8TB68 274 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 PTCD2Q8WV60 388 aaKnown RBP3.78□□□□□ -1.8
VCAM1-205ENST00000603679 TAOK3Q9H2K8 898 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 GPRC5DQ9NZD1 345 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 RNF181Q9P0P0 153 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 NOVA2Q9UNW9 492 aaKnown RBP3.78□□□□□ -1.8
VCAM1-205ENST00000603679 SIP14410 1827 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 INHBEP58166 350 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 DPY19L2Q6NUT2 758 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 FBXO46Q6PJ61 603 aaPredicted RBP3.78□□□□□ -1.8
VCAM1-205ENST00000603679 FBXO33Q7Z6M2 555 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 RNF135Q8IUD6 432 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 MRIQ9BWK5 157 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 NLRP2Q9NX02 1062 aa3.78□□□□□ -1.8
VCAM1-205ENST00000603679 MED23Q9ULK4 1368 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 FAM196BA6NMK8 535 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 SERPINB2P05120 415 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 EPHX2P34913 555 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 SP8Q8IXZ3 490 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 TRIM34Q9BYJ4 488 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 HABP4Q5JVS0 413 aaKnown RBP3.77□□□□□ -1.81
VCAM1-205ENST00000603679 SLAIN1Q8ND83 568 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 AIDAQ96BJ3 306 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 ACSBG1Q96GR2 724 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 PLCD4Q9BRC7 762 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 BRINP2Q9C0B6 783 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 ZMIZ1Q9ULJ6 1067 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 A0A0G2JLW4 131 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 G3V3G9 751 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 GPR37L1O60883 481 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 APPP05067 770 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 ZBTB48P10074 688 aaPredicted RBP3.77□□□□□ -1.81
VCAM1-205ENST00000603679 KIAA2012Q0VF49 1180 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 CCDC181Q5TID7 509 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 TBC1D9Q6ZT07 1266 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 RASAL3Q86YV0 1011 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 C16orf71Q8IYS4 520 aaPredicted RBP3.77□□□□□ -1.81
VCAM1-205ENST00000603679 METTL14Q9HCE5 456 aaKnown RBP3.77□□□□□ -1.81
VCAM1-205ENST00000603679 LOXHD1Q8IVV2 1947 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 PLXNA3P51805 1871 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 DENND4AQ7Z401 1863 aa3.77□□□□□ -1.81
VCAM1-205ENST00000603679 MYO5AQ9Y4I1 1855 aaKnown RBP3.77□□□□□ -1.81
VCAM1-205ENST00000603679 H0YIN7 160 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 VIL1P09327 827 aaKnown RBP3.76□□□□□ -1.81
VCAM1-205ENST00000603679 SF3B3Q15393 1217 aaKnown RBP3.76□□□□□ -1.81
VCAM1-205ENST00000603679 CERS3Q8IU89 383 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 SLC12A5Q9H2X9 1139 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 TMA7Q9Y2S6 64 aaKnown RBP3.76□□□□□ -1.81
VCAM1-205ENST00000603679 ATP6V0A2Q9Y487 856 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 MOXD2PA6NHM9 499 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 NTSR2O95665 410 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 RECKO95980 971 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 C7P10643 843 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 MAP3K10Q02779 954 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 QPCTQ16769 361 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 HSP90AB2PQ58FF8 381 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 AGBL3Q8NEM8 1001 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 NYXQ9GZU5 481 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 BOLA1Q9Y3E2 137 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 SCAMP3O14828 347 aaKnown RBP3.76□□□□□ -1.81
VCAM1-205ENST00000603679 LRIT3Q3SXY7 679 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 DPH6Q7L8W6 267 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 ANKLE1Q8NAG6 615 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 CAPNS2Q96L46 248 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 LCTP09848 1927 aa3.76□□□□□ -1.81
VCAM1-205ENST00000603679 TLDC2A0PJX2 215 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 ALDH1A1P00352 501 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 ERCC5P28715 1186 aaPredicted RBP3.75□□□□□ -1.81
VCAM1-205ENST00000603679 NKX3-2P78367 333 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 SWI5Q1ZZU3 235 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 PADI6Q6TGC4 694 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 MCCD1P59942 119 aaPredicted RBP3.75□□□□□ -1.81
VCAM1-205ENST00000603679 RASSF7Q02833 373 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 FAM161AQ3B820 660 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 PARP10Q53GL7 1025 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 PRPF40BQ6NWY9 871 aaKnown RBP3.75□□□□□ -1.81
VCAM1-205ENST00000603679 HELBQ8NG08 1087 aaPredicted RBP3.75□□□□□ -1.81
VCAM1-205ENST00000603679 ASB16Q96NS5 453 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 MYO3BQ8WXR4 1341 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 RFC4P35249 363 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 RBM10P98175 930 aaKnown RBP3.75□□□□□ -1.81
VCAM1-205ENST00000603679 NOL8Q76FK4 1167 aaKnown RBP3.75□□□□□ -1.81
VCAM1-205ENST00000603679 ZSCAN29Q8IWY8 852 aaPredicted RBP3.75□□□□□ -1.81
VCAM1-205ENST00000603679 CNTROBQ8N137 903 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 FAM200AQ8TCP9 573 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 PLA2G12BQ9BX93 195 aa3.75□□□□□ -1.81
VCAM1-205ENST00000603679 RGS20O76081 388 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 PRKAR2AP13861 404 aaKnown RBP3.74□□□□□ -1.81
VCAM1-205ENST00000603679 LBX1P52954 281 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 C2CD5Q86YS7 1000 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 ZNF333Q96JL9 665 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 PCGF6Q9BYE7 350 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 RNF186Q9NXI6 227 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 BIN2Q9UBW5 565 aaPredicted RBP3.74□□□□□ -1.81
VCAM1-205ENST00000603679 HPS5Q9UPZ3 1129 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 UTYO14607 1347 aa3.74□□□□□ -1.81
VCAM1-205ENST00000603679 IL16Q14005 1332 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms