RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 AXIN1O15169 862 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 TRPA1O75762 1119 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 CD33P20138 364 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 CRKP46108 304 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 PTSQ03393 145 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 FAAP100Q0VG06 881 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 NEUROD1Q13562 356 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 RAB33AQ14088 237 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 DBN1Q16643 649 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 FAM182BQ5T319 152 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 ANKS3Q6ZW76 656 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 ABHD17AQ96GS6 310 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 PBX4Q9BYU1 374 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 ROBO2Q9HCK4 1378 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 PRKAG3Q9UGI9 489 aa6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 ATXN7L1Q9ULK2 861 aaPredicted RBP6.12□□□□□ -1.43
AC004542.1-201ENST00000602955 LOC102724428A0A0B4J2F2 783 aa6.11□□□□□ -1.43
AC004542.1-201ENST00000602955 PAGE1O75459 146 aa6.11□□□□□ -1.43
AC004542.1-201ENST00000602955 SIK1P57059 783 aa6.11□□□□□ -1.43
AC004542.1-201ENST00000602955 LRP10Q7Z4F1 713 aa6.11□□□□□ -1.43
AC004542.1-201ENST00000602955 TRIM42Q8IWZ5 723 aa6.11□□□□□ -1.43
AC004542.1-201ENST00000602955 CPLX3Q8WVH0 158 aa6.11□□□□□ -1.43
AC004542.1-201ENST00000602955 NKD1Q969G9 470 aa6.11□□□□□ -1.43
AC004542.1-201ENST00000602955 TMEM39AQ9NV64 488 aa6.11□□□□□ -1.43
AC004542.1-201ENST00000602955 MRVI1Q9Y6F6 885 aa6.11□□□□□ -1.43
AC004542.1-201ENST00000602955 SBNO2Q9Y2G9 1366 aa6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 HSD3B2P26439 372 aa6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 TCEAL1Q15170 157 aa6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 PCSK7Q16549 785 aa6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 RAB44Q7Z6P3 723 aaPredicted RBP6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 CCDC155Q8N6L0 562 aa6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 SHDQ96IW2 340 aa6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 SRRTQ9BXP5 876 aaKnown RBP6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 TRIM55Q9BYV6 548 aa6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 RASSF4Q9H2L5 321 aa6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 SAMM50Q9Y512 469 aa6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 MRPL42Q9Y6G3 142 aaKnown RBP6.1□□□□□ -1.43
AC004542.1-201ENST00000602955 FAM221AA4D161 298 aa6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 ZBTB42B2RXF5 422 aa6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 U2SURPO15042 1029 aaKnown RBP6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 PPP2R3AQ06190 1150 aa6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 PKDCCQ504Y2 493 aa6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 TNNI3KQ59H18 835 aa6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 ASAP3Q8TDY4 903 aa6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 ANAPC16Q96DE5 110 aa6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 ZNF837Q96EG3 531 aaPredicted RBP6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 SRPK1Q96SB4 655 aaKnown RBP6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 MIR1-1HGQ9H1L0 117 aa6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 CLEC4MQ9H2X3 399 aaPredicted RBP6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 ATP13A2Q9NQ11 1180 aa6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 GPN3Q9UHW5 284 aaPredicted RBP6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 PHF24Q9UPV7 400 aa6.09□□□□□ -1.43
AC004542.1-201ENST00000602955 SOBPA7XYQ1 873 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 J3QW42 95 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 B3GALT4O96024 378 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 F13A1P00488 732 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 FGFR3P22607 806 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 ATP11AP98196 1134 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 SEZ6Q53EL9 994 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 BNC2Q6ZN30 1099 aaPredicted RBP6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 HNRNPLLQ8WVV9 542 aaKnown RBP6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 GATAD2BQ8WXI9 593 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 BSNDQ8WZ55 320 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 GTPBP3Q969Y2 492 aaKnown RBP6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 DEPDC7Q96QD5 511 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 POP1Q99575 1024 aaKnown RBP6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 MUC3BQ9H195 1237 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 SNTG2Q9NY99 539 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 PPT2Q9UMR5 302 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 CYP8B1Q9UNU6 501 aa6.08□□□□□ -1.44
AC004542.1-201ENST00000602955 ENPP3O14638 875 aa6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 SMAD7O15105 426 aaKnown RBP6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 CILPO75339 1184 aa6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 GHRHP01286 108 aa6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 NME2P22392 152 aa6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 GIPRP48546 466 aa6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 MLLT1Q03111 559 aaPredicted RBP6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 MPP2Q14168 576 aa6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 RASA3Q14644 834 aa6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 CWF19L2Q2TBE0 894 aaKnown RBP6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 REXO1Q8N1G1 1221 aaKnown RBP6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 FBXO27Q8NI29 283 aa6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 RNPC3Q96LT9 517 aaKnown RBP6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 RBSNQ9H1K0 784 aa6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 DNAJB12Q9NXW2 375 aaKnown RBP6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 R3HCC1Q9Y3T6 440 aaKnown RBP6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 PCDHB5Q9Y5E4 795 aa6.07□□□□□ -1.44
AC004542.1-201ENST00000602955 TLR3O15455 904 aaKnown RBP6.06□□□□□ -1.44
AC004542.1-201ENST00000602955 SMNDC1O75940 238 aaKnown RBP eCLIP6.06□□□□□ -1.44
AC004542.1-201ENST00000602955 LMNB1P20700 586 aa6.06□□□□□ -1.44
AC004542.1-201ENST00000602955 BMP6P22004 513 aa6.06□□□□□ -1.44
AC004542.1-201ENST00000602955 ITGA6P23229 1130 aa6.06□□□□□ -1.44
AC004542.1-201ENST00000602955 ZNF165P49910 485 aa6.06□□□□□ -1.44
AC004542.1-201ENST00000602955 EIF6P56537 245 aaKnown RBP6.06□□□□□ -1.44
AC004542.1-201ENST00000602955 PCDH1Q08174 1060 aa6.06□□□□□ -1.44
AC004542.1-201ENST00000602955 LRRC14Q15048 493 aa6.06□□□□□ -1.44
AC004542.1-201ENST00000602955 RASIP1Q5U651 963 aa6.06□□□□□ -1.44
AC004542.1-201ENST00000602955 ZNF468Q5VIY5 522 aaPredicted RBP6.06□□□□□ -1.44
AC004542.1-201ENST00000602955 DIEXFQ68CQ4 756 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms