RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, human

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN23-206	ENST00000602307	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
PTPN23-206	ENST00000602307	PAXBP1	Q9Y5B6	917 aa		13.77	□□□□□ -0.21
PTPN23-206	ENST00000602307		V9GYY5	206 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN23-206	ENST00000602307	PSMA7	O14818	248 aa		13.77	□□□□□ -0.21
PTPN23-206	ENST00000602307	PLIN2	Q99541	437 aa		13.77	□□□□□ -0.21
PTPN23-206	ENST00000602307	LRRC27	Q9C0I9	530 aa		13.77	□□□□□ -0.21
PTPN23-206	ENST00000602307	ERMN	Q8TAM6	284 aa		13.77	□□□□□ -0.21
PTPN23-206	ENST00000602307	FAM173B	Q6P4H8	233 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	INTS4	Q96HW7	963 aa	Known RBP	13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307		A0A1B0GUL7	405 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	PRIMPOL	Q96LW4	560 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	ORAI2	Q96SN7	254 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	RBSN	Q9H1K0	784 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	MBD4	O95243	580 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	MCM7	P33993	719 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	CTR9	Q6PD62	1173 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	HOOK3	Q86VS8	718 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	ZBTB9	Q96C00	473 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	NDUFB9	Q9Y6M9	179 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	TNNI2	P48788	182 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	ARID5A	Q03989	594 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	BICD1	Q96G01	975 aa		13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	ZNF594	Q96JF6	807 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN23-206	ENST00000602307	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.76	□□□□□ -0.21	2e-8	■■■□□ 17.8
PTPN23-206	ENST00000602307	PNMA6E	A0A0J9YXQ4	647 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	RIMBP2	O15034	1052 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	CTAGE1	Q96RT6	745 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	ZFYVE9	O95405	1425 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	ZMYM3	Q14202	1370 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307		A0A1B0GVL5	298 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	CHL1	O00533	1208 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	SPAG1	Q07617	926 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	MAATS1	Q7Z4T9	603 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	ZNF804A	Q7Z570	1209 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	GNAT2	P19087	354 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	CCDC174	Q6PII3	467 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	FAM227B	Q96M60	508 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	OGFOD1	Q8N543	542 aa		13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	RTCB	Q9Y3I0	505 aa	Known RBP	13.75	□□□□□ -0.21
PTPN23-206	ENST00000602307	RNF187	Q5TA31	235 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	POTEB2	H3BUK9	544 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	EYA2	O00167	538 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	CYLC1	P35663	651 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	UBE4A	Q14139	1066 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	C6orf50	Q9HD87	102 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	IFNK	Q9P0W0	207 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307		B4E1Z4	1266 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	A1BG	P04217	495 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	CALM1	P0DP23	149 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	CALM2	P0DP24	149 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	CALM3	P0DP25	149 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	BTG4	Q9NY30	223 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	GOLGA6L10	A0A0M3HER8	536 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	BMS1	Q14692	1282 aa	Known RBP	13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	SMARCC2	Q8TAQ2	1214 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	FAM107B	Q9H098	131 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	NCOA5	Q9HCD5	579 aa	Known RBP	13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	TBX22	Q9Y458	520 aa		13.74	□□□□□ -0.21
PTPN23-206	ENST00000602307	USP19	O94966	1318 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	LMAN1	P49257	510 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	TNNI3K	Q59H18	835 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	FPGT-TNNI3K	V9GXZ4	949 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	RAD50	Q92878	1312 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	TOM1	O60784	492 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	CALML3	P27482	149 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	KRT2	P35908	639 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	TTC37	Q6PGP7	1564 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	ZMYM4	Q5VZL5	1548 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	ITGA6	P23229	1130 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	METTL22	Q9BUU2	404 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	TAOK3	Q9H2K8	898 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	VEZT	Q9HBM0	779 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	WDHD1	O75717	1129 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	NYX	Q9GZU5	481 aa		13.73	□□□□□ -0.21
PTPN23-206	ENST00000602307	LDHB	P07195	334 aa	Known RBP	13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	MCM6	Q14566	821 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	KRT79	Q5XKE5	535 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	EHBP1	Q8NDI1	1231 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	5e-7	■■■□□ 15
PTPN23-206	ENST00000602307	SLC27A2	O14975	620 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	RPS6KB1	P23443	525 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	OTUD7B	Q6GQQ9	843 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	PLBD2	Q8NHP8	589 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	RRP36	Q96EU6	259 aa	Known RBP	13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	PREX2	Q70Z35	1606 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	CTAGE15	A4D2H0	777 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	CTAGE8	P0CG41	777 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	KARS	Q15046	597 aa	Known RBP	13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	BRAP	Q7Z569	592 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	CCDC91	Q7Z6B0	441 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	CTAGE6	Q86UF2	777 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	CTAGE4	Q8IX94	777 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	FERMT2	Q96AC1	680 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	SNX14	Q9Y5W7	946 aa		13.72	□□□□□ -0.21
PTPN23-206	ENST00000602307	PCDH11X	Q9BZA7	1347 aa		13.71	□□□□□ -0.21
PTPN23-206	ENST00000602307	PCDH11Y	Q9BZA8	1340 aa		13.71	□□□□□ -0.21
PTPN23-206	ENST00000602307	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN23-206	ENST00000602307	MYZAP	P0CAP1	466 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms