RNA–Protein interactions for RNA: ENST00000602150.2

SCN1B-205, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2

Gene SCN1B, Length 3,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-205ENST00000602150 CTNNA3Q9UI47 895 aa12.92□□□□□ -0.34
SCN1B-205ENST00000602150 IGSF3O75054 1194 aa12.91□□□□□ -0.34
SCN1B-205ENST00000602150 GYG1P46976 350 aa12.91□□□□□ -0.34
SCN1B-205ENST00000602150 TTLL5Q6EMB2 1281 aa12.91□□□□□ -0.34
SCN1B-205ENST00000602150 ABCC12Q96J65 1359 aa12.91□□□□□ -0.34
SCN1B-205ENST00000602150 LAMB4A4D0S4 1761 aa12.91□□□□□ -0.34
SCN1B-205ENST00000602150 KLRK1P26718 216 aa12.91□□□□□ -0.34
SCN1B-205ENST00000602150 IGHMBP2P38935 993 aaKnown RBP12.91□□□□□ -0.34
SCN1B-205ENST00000602150 LSG1Q9H089 658 aaKnown RBP12.91□□□□□ -0.34
SCN1B-205ENST00000602150 ERVV-1B6SEH8 477 aa12.9□□□□□ -0.34
SCN1B-205ENST00000602150 CHAF1AQ13111 956 aaPredicted RBP12.9□□□□□ -0.34
SCN1B-205ENST00000602150 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
SCN1B-205ENST00000602150 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.9□□□□□ -0.34
SCN1B-205ENST00000602150 APPP05067 770 aa12.9□□□□□ -0.34
SCN1B-205ENST00000602150 UBE2HP62256 183 aa12.9□□□□□ -0.34
SCN1B-205ENST00000602150 SNX14Q9Y5W7 946 aa12.9□□□□□ -0.34
SCN1B-205ENST00000602150 SLFN14P0C7P3 912 aa12.9□□□□□ -0.34
SCN1B-205ENST00000602150 GABPB1Q06547 395 aaPredicted RBP12.9□□□□□ -0.34
SCN1B-205ENST00000602150 CCDC152Q4G0S7 254 aa12.9□□□□□ -0.34
SCN1B-205ENST00000602150 NECAB1Q8N987 351 aa12.9□□□□□ -0.34
SCN1B-205ENST00000602150 MCAMP43121 646 aa12.89□□□□□ -0.35
SCN1B-205ENST00000602150 TRIM28Q13263 835 aaKnown RBP12.89□□□□□ -0.35
SCN1B-205ENST00000602150 RUFY2Q8WXA3 655 aa12.89□□□□□ -0.35
SCN1B-205ENST00000602150 RIPOR2Q9Y4F9 1068 aa12.89□□□□□ -0.35
SCN1B-205ENST00000602150 CSF1RP07333 972 aa12.89□□□□□ -0.35
SCN1B-205ENST00000602150 ATP5JP18859 108 aa12.89□□□□□ -0.35
SCN1B-205ENST00000602150 DDX41Q9UJV9 622 aaKnown RBP12.89□□□□□ -0.35
SCN1B-205ENST00000602150 TAF1P21675 1872 aa12.89□□□□□ -0.35
SCN1B-205ENST00000602150 RPS6KA4O75676 772 aa12.89□□□□□ -0.35
SCN1B-205ENST00000602150 VPS37DQ86XT2 251 aa12.89□□□□□ -0.35
SCN1B-205ENST00000602150 MIGA1Q8NAN2 632 aa12.89□□□□□ -0.35
SCN1B-205ENST00000602150 CNPY2Q9Y2B0 182 aa12.89□□□□□ -0.35
SCN1B-205ENST00000602150 MORC2Q9Y6X9 1032 aaPredicted RBP12.89□□□□□ -0.35
SCN1B-205ENST00000602150 CHRNDQ07001 517 aa12.88□□□□□ -0.35
SCN1B-205ENST00000602150 NFIXQ14938 502 aa12.88□□□□□ -0.35
SCN1B-205ENST00000602150 OLFM4Q6UX06 510 aa12.88□□□□□ -0.35
SCN1B-205ENST00000602150 CCDC171Q6TFL3 1326 aa12.88□□□□□ -0.35
SCN1B-205ENST00000602150 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
SCN1B-205ENST00000602150 RAD50Q92878 1312 aa12.88□□□□□ -0.35
SCN1B-205ENST00000602150 CCDC102BQ68D86 513 aa12.87□□□□□ -0.35
SCN1B-205ENST00000602150 PAPPAQ13219 1627 aa12.87□□□□□ -0.35
SCN1B-205ENST00000602150 M0R2C6 588 aa12.87□□□□□ -0.35
SCN1B-205ENST00000602150 PDE8BO95263 885 aa12.87□□□□□ -0.35
SCN1B-205ENST00000602150 LARGE1O95461 756 aa12.87□□□□□ -0.35
SCN1B-205ENST00000602150 HAUS7Q99871 368 aa12.87□□□□□ -0.35
SCN1B-205ENST00000602150 AOX1Q06278 1338 aa12.87□□□□□ -0.35
SCN1B-205ENST00000602150 CREB3L3Q68CJ9 461 aa12.87□□□□□ -0.35
SCN1B-205ENST00000602150 POTEAQ6S8J7 498 aa12.87□□□□□ -0.35
SCN1B-205ENST00000602150 ANKRD18AQ8IVF6 992 aa12.87□□□□□ -0.35
SCN1B-205ENST00000602150 NARFQ9UHQ1 456 aa12.87□□□□□ -0.35
SCN1B-205ENST00000602150 SLC9C2Q5TAH2 1124 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 PROM2Q8N271 834 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 OSBP2Q969R2 916 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 PIH1D3Q9NQM4 214 aaKnown RBP12.86□□□□□ -0.35
SCN1B-205ENST00000602150 ZNF609O15014 1411 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 ZSCAN22P10073 491 aaPredicted RBP12.86□□□□□ -0.35
SCN1B-205ENST00000602150 AK2P54819 239 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 PARP10Q53GL7 1025 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 GIMAP6Q6P9H5 292 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 NLRP3Q96P20 1036 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 FAM53CQ9NYF3 392 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 AKAP2Q9Y2D5 859 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 TJP1Q07157 1748 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 NUP98P52948 1817 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 RXRBP28702 533 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 EN1Q05925 392 aaPredicted RBP12.86□□□□□ -0.35
SCN1B-205ENST00000602150 ZNF827Q17R98 1081 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 CNBD1Q8NA66 436 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 KBTBD3Q8NAB2 608 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 PUS7LQ9H0K6 701 aaKnown RBP12.86□□□□□ -0.35
SCN1B-205ENST00000602150 ANKIB1Q9P2G1 1089 aa12.86□□□□□ -0.35
SCN1B-205ENST00000602150 PLEKHG2Q9H7P9 1386 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 EPB41L2O43491 1005 aaKnown RBP12.85□□□□□ -0.35
SCN1B-205ENST00000602150 ZNF771Q7L3S4 317 aaPredicted RBP12.85□□□□□ -0.35
SCN1B-205ENST00000602150 INCENPQ9NQS7 918 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 TOMM22Q9NS69 142 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 CGNQ9P2M7 1197 aaKnown RBP12.85□□□□□ -0.35
SCN1B-205ENST00000602150 RIC1Q4ADV7 1423 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 SMTNL1A8MU46 457 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 HSP90B1P14625 803 aaKnown RBP12.85□□□□□ -0.35
SCN1B-205ENST00000602150 HSPA4P34932 840 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 PDE4CQ08493 712 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 RASGRF1Q13972 1273 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 NUP188Q5SRE5 1749 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 DENND2AQ9ULE3 1009 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 CDHR2Q9BYE9 1310 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 SLC27A2O14975 620 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 ZKSCAN1P17029 563 aaPredicted RBP12.85□□□□□ -0.35
SCN1B-205ENST00000602150 TPTE2Q6XPS3 522 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 DEFB132Q7Z7B7 95 aa12.85□□□□□ -0.35
SCN1B-205ENST00000602150 PDGFDQ9GZP0 370 aaPredicted RBP12.85□□□□□ -0.35
SCN1B-205ENST00000602150 GOLGA6L6A8MZA4 724 aa12.84□□□□□ -0.35
SCN1B-205ENST00000602150 GPHNQ9NQX3 736 aaPredicted RBP12.84□□□□□ -0.35
SCN1B-205ENST00000602150 RBM6P78332 1123 aaKnown RBP12.84□□□□□ -0.35
SCN1B-205ENST00000602150 TERF2Q15554 542 aa12.84□□□□□ -0.35
SCN1B-205ENST00000602150 KIF18AQ8NI77 898 aa12.84□□□□□ -0.35
SCN1B-205ENST00000602150 MAST3O60307 1309 aa12.84□□□□□ -0.35
SCN1B-205ENST00000602150 USP42Q9H9J4 1324 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms