RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 CD209Q9NNX6 404 aa20.65■□□□□ 0.9
SSBP4-211ENST00000601614 PPP1R12BO60237 982 aaPredicted RBP20.64■□□□□ 0.89
SSBP4-211ENST00000601614 WDR43Q15061 677 aaKnown RBP eCLIP20.64■□□□□ 0.89
SSBP4-211ENST00000601614 KSR2Q6VAB6 950 aa20.64■□□□□ 0.89
SSBP4-211ENST00000601614 TSPYL6Q8N831 410 aa20.64■□□□□ 0.89
SSBP4-211ENST00000601614 MTMR14Q8NCE2 650 aa20.64■□□□□ 0.89
SSBP4-211ENST00000601614 NEURL1BA8MQ27 555 aa20.63■□□□□ 0.89
SSBP4-211ENST00000601614 USP2O75604 605 aaPredicted RBP20.63■□□□□ 0.89
SSBP4-211ENST00000601614 IGHMBP2P38935 993 aaKnown RBP20.63■□□□□ 0.89
SSBP4-211ENST00000601614 UBE3BQ7Z3V4 1068 aa20.63■□□□□ 0.89
SSBP4-211ENST00000601614 PRMT6Q96LA8 375 aaPredicted RBP20.63■□□□□ 0.89
SSBP4-211ENST00000601614 COLQQ9Y215 455 aaPredicted RBP20.63■□□□□ 0.89
SSBP4-211ENST00000601614 TESPA1A2RU30 521 aaPredicted RBP20.62■□□□□ 0.89
SSBP4-211ENST00000601614 H7C1W4 665 aa20.62■□□□□ 0.89
SSBP4-211ENST00000601614 ITGA6P23229 1130 aa20.62■□□□□ 0.89
SSBP4-211ENST00000601614 SP3Q02447 781 aa20.62■□□□□ 0.89
SSBP4-211ENST00000601614 CCDC30Q5VVM6 783 aa20.62■□□□□ 0.89
SSBP4-211ENST00000601614 ZNF333Q96JL9 665 aa20.62■□□□□ 0.89
SSBP4-211ENST00000601614 PPP2R3BQ9Y5P8 575 aa20.62■□□□□ 0.89
SSBP4-211ENST00000601614 SPDYE2BA6NHP3 402 aa20.61■□□□□ 0.89
SSBP4-211ENST00000601614 F8W031 263 aaPredicted RBP20.61■□□□□ 0.89
SSBP4-211ENST00000601614 SPDYE6P0CI01 402 aa20.61■□□□□ 0.89
SSBP4-211ENST00000601614 GNAI1P63096 354 aa20.61■□□□□ 0.89
SSBP4-211ENST00000601614 CHRNDQ07001 517 aa20.61■□□□□ 0.89
SSBP4-211ENST00000601614 CFAP100Q494V2 611 aa20.61■□□□□ 0.89
SSBP4-211ENST00000601614 ANKRD2Q9GZV1 360 aa20.61■□□□□ 0.89
SSBP4-211ENST00000601614 UNCXA6NJT0 531 aa20.6■□□□□ 0.89
SSBP4-211ENST00000601614 APAF1O14727 1248 aa20.6■□□□□ 0.89
SSBP4-211ENST00000601614 G2E3Q7L622 706 aa20.6■□□□□ 0.89
SSBP4-211ENST00000601614 PLA2G12BQ9BX93 195 aa20.6■□□□□ 0.89
SSBP4-211ENST00000601614 VEZTQ9HBM0 779 aa20.6■□□□□ 0.89
SSBP4-211ENST00000601614 SZT2Q5T011 3432 aa20.59■□□□□ 0.89
SSBP4-211ENST00000601614 TAF5LO75529 589 aa20.59■□□□□ 0.89
SSBP4-211ENST00000601614 CASP7P55210 303 aa20.59■□□□□ 0.89
SSBP4-211ENST00000601614 SUPT20HL1Q3ZLR7 823 aa20.59■□□□□ 0.89
SSBP4-211ENST00000601614 CNKSR2Q8WXI2 1034 aa20.59■□□□□ 0.89
SSBP4-211ENST00000601614 MS4A4AQ96JQ5 239 aa20.59■□□□□ 0.89
SSBP4-211ENST00000601614 JAG2Q9Y219 1238 aa20.59■□□□□ 0.89
SSBP4-211ENST00000601614 PTCH2Q9Y6C5 1203 aa20.59■□□□□ 0.89
SSBP4-211ENST00000601614 CSF1RP07333 972 aa20.58■□□□□ 0.89
SSBP4-211ENST00000601614 KCNJ4P48050 445 aa20.58■□□□□ 0.89
SSBP4-211ENST00000601614 IREB2P48200 963 aaKnown RBP20.58■□□□□ 0.89
SSBP4-211ENST00000601614 RASA3Q14644 834 aa20.58■□□□□ 0.89
SSBP4-211ENST00000601614 OTUD7BQ6GQQ9 843 aa20.58■□□□□ 0.89
SSBP4-211ENST00000601614 CDAN1Q8IWY9 1227 aa20.58■□□□□ 0.89
SSBP4-211ENST00000601614 ANKRD13AQ8IZ07 590 aa20.58■□□□□ 0.89
SSBP4-211ENST00000601614 HELBQ8NG08 1087 aaPredicted RBP20.58■□□□□ 0.89
SSBP4-211ENST00000601614 OPTNQ96CV9 577 aa20.58■□□□□ 0.89
SSBP4-211ENST00000601614 MPHOSPH8Q99549 860 aa20.58■□□□□ 0.89
SSBP4-211ENST00000601614 TMEM106CQ9BVX2 250 aa20.58■□□□□ 0.89
SSBP4-211ENST00000601614 ELP3Q9H9T3 547 aa20.58■□□□□ 0.89
SSBP4-211ENST00000601614 ARAP2Q8WZ64 1704 aa20.58■□□□□ 0.88
SSBP4-211ENST00000601614 NEXNQ0ZGT2 675 aa20.57■□□□□ 0.88
SSBP4-211ENST00000601614 IL1R1P14778 569 aa20.56■□□□□ 0.88
SSBP4-211ENST00000601614 GCKRQ14397 625 aa20.56■□□□□ 0.88
SSBP4-211ENST00000601614 C15orf52Q6ZUT6 534 aaKnown RBP20.56■□□□□ 0.88
SSBP4-211ENST00000601614 BRI3BPQ8WY22 251 aa20.56■□□□□ 0.88
SSBP4-211ENST00000601614 OTUD5Q96G74 571 aa20.56■□□□□ 0.88
SSBP4-211ENST00000601614 MYO1BO43795 1136 aa20.55■□□□□ 0.88
SSBP4-211ENST00000601614 MYCP01106 439 aaPredicted RBP20.55■□□□□ 0.88
SSBP4-211ENST00000601614 SLC9C1Q4G0N8 1177 aa20.55■□□□□ 0.88
SSBP4-211ENST00000601614 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.55■□□□□ 0.88
SSBP4-211ENST00000601614 H0YGN5 161 aa20.54■□□□□ 0.88
SSBP4-211ENST00000601614 FKBP1AP62942 108 aaKnown RBP20.54■□□□□ 0.88
SSBP4-211ENST00000601614 FAM43AQ8N2R8 423 aa20.54■□□□□ 0.88
SSBP4-211ENST00000601614 CALD1Q05682 793 aaKnown RBP20.53■□□□□ 0.88
SSBP4-211ENST00000601614 TAF1CQ15572 869 aaPredicted RBP20.53■□□□□ 0.88
SSBP4-211ENST00000601614 TSR2Q969E8 191 aaKnown RBP20.53■□□□□ 0.88
SSBP4-211ENST00000601614 TEPSINQ96N21 525 aa20.53■□□□□ 0.88
SSBP4-211ENST00000601614 ARHGAP39Q9C0H5 1083 aa20.53■□□□□ 0.88
SSBP4-211ENST00000601614 RBM5P52756 815 aaKnown RBP eCLIP20.52■□□□□ 0.88
SSBP4-211ENST00000601614 SLC4A8Q2Y0W8 1093 aa20.52■□□□□ 0.88
SSBP4-211ENST00000601614 SPDYE2Q495Y8 402 aa20.52■□□□□ 0.88
SSBP4-211ENST00000601614 SH3TC2Q8TF17 1288 aa20.52■□□□□ 0.88
SSBP4-211ENST00000601614 CCL15-CCL14A0A0B4J2E2 113 aa20.51■□□□□ 0.87
SSBP4-211ENST00000601614 DDX10Q13206 875 aaKnown RBP20.51■□□□□ 0.87
SSBP4-211ENST00000601614 VGLL4Q14135 290 aa20.51■□□□□ 0.87
SSBP4-211ENST00000601614 CCL15Q16663 113 aa20.51■□□□□ 0.87
SSBP4-211ENST00000601614 ZNF804AQ7Z570 1209 aa20.51■□□□□ 0.87
SSBP4-211ENST00000601614 TDRD3Q9H7E2 651 aaKnown RBP20.51■□□□□ 0.87
SSBP4-211ENST00000601614 ZFYVE28Q9HCC9 887 aa20.51■□□□□ 0.87
SSBP4-211ENST00000601614 ZNF70Q9UC06 446 aaPredicted RBP20.51■□□□□ 0.87
SSBP4-211ENST00000601614 ANKRD18BA2A2Z9 1011 aa20.5■□□□□ 0.87
SSBP4-211ENST00000601614 NBPF11Q86T75 865 aa20.5■□□□□ 0.87
SSBP4-211ENST00000601614 STK31Q9BXU1 1019 aa20.5■□□□□ 0.87
SSBP4-211ENST00000601614 CACNA1FO60840 1977 aa20.5■□□□□ 0.87
SSBP4-211ENST00000601614 FOXO4P98177 505 aa20.49■□□□□ 0.87
SSBP4-211ENST00000601614 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.49■□□□□ 0.87
SSBP4-211ENST00000601614 CHMP4AQ9BY43 222 aa20.49■□□□□ 0.87
SSBP4-211ENST00000601614 SLC4A2P04920 1241 aa20.48■□□□□ 0.87
SSBP4-211ENST00000601614 GTF2A2P52657 109 aa20.48■□□□□ 0.87
SSBP4-211ENST00000601614 CHRDL2Q6WN34 429 aa20.48■□□□□ 0.87
SSBP4-211ENST00000601614 SHISA4Q96DD7 197 aa20.48■□□□□ 0.87
SSBP4-211ENST00000601614 TMEM39BQ9GZU3 492 aa20.48■□□□□ 0.87
SSBP4-211ENST00000601614 FAM205AQ6ZU69 1335 aa20.48■□□□□ 0.87
SSBP4-211ENST00000601614 TCP10L2B9ZVM9 353 aa20.47■□□□□ 0.87
SSBP4-211ENST00000601614 FLIIQ13045 1269 aa20.47■□□□□ 0.87
SSBP4-211ENST00000601614 TNFAIP1Q13829 316 aa20.47■□□□□ 0.87
SSBP4-211ENST00000601614 ZNF594Q96JF6 807 aaPredicted RBP20.47■□□□□ 0.87
SSBP4-211ENST00000601614 RANBP2P49792 3224 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms