RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 DNAJC2Q99543 621 aaKnown RBP24.94■■□□□ 1.58
PNKP-215ENST00000600910 DENND2AQ9ULE3 1009 aa24.94■■□□□ 1.58
PNKP-215ENST00000600910 AKAP11Q9UKA4 1901 aa24.93■■□□□ 1.58
PNKP-215ENST00000600910 MYH13Q9UKX3 1938 aa24.93■■□□□ 1.58
PNKP-215ENST00000600910 HAUS7Q99871 368 aa24.93■■□□□ 1.58
PNKP-215ENST00000600910 ZBTB22O15209 634 aa24.92■■□□□ 1.58
PNKP-215ENST00000600910 NIM1KQ8IY84 436 aa24.92■■□□□ 1.58
PNKP-215ENST00000600910 CHD4Q14839 1912 aa24.92■■□□□ 1.58
PNKP-215ENST00000600910 CCDC88AQ3V6T2 1871 aa24.92■■□□□ 1.58
PNKP-215ENST00000600910 MAP4K4O95819 1239 aaPredicted RBP24.91■■□□□ 1.58
PNKP-215ENST00000600910 GSPT1P15170 499 aaKnown RBP24.91■■□□□ 1.58
PNKP-215ENST00000600910 LMNB1P20700 586 aa24.91■■□□□ 1.58
PNKP-215ENST00000600910 ZAP70P43403 619 aa24.91■■□□□ 1.58
PNKP-215ENST00000600910 JDP2Q8WYK2 163 aa24.91■■□□□ 1.58
PNKP-215ENST00000600910 JAG2Q9Y219 1238 aa24.91■■□□□ 1.58
PNKP-215ENST00000600910 CHAF1AQ13111 956 aaPredicted RBP24.9■■□□□ 1.58
PNKP-215ENST00000600910 SBF1O95248 1867 aa24.9■■□□□ 1.58
PNKP-215ENST00000600910 YDJCA8MPS7 323 aa24.9■■□□□ 1.58
PNKP-215ENST00000600910 EDC3Q96F86 508 aaKnown RBP24.9■■□□□ 1.58
PNKP-215ENST00000600910 KCNQ5Q9NR82 932 aa24.9■■□□□ 1.58
PNKP-215ENST00000600910 PDS5AQ29RF7 1337 aaKnown RBP24.89■■□□□ 1.58
PNKP-215ENST00000600910 GTF2IP78347 998 aa24.89■■□□□ 1.57
PNKP-215ENST00000600910 PAG1Q9NWQ8 432 aa24.89■■□□□ 1.57
PNKP-215ENST00000600910 ZNRF3Q9ULT6 936 aa24.89■■□□□ 1.57
PNKP-215ENST00000600910 SCN9AQ15858 1988 aa24.88■■□□□ 1.57
PNKP-215ENST00000600910 GOLIM4O00461 696 aa24.88■■□□□ 1.57
PNKP-215ENST00000600910 CYP2E1P05181 493 aaPredicted RBP24.88■■□□□ 1.57
PNKP-215ENST00000600910 ANTXR1Q9H6X2 564 aa24.88■■□□□ 1.57
PNKP-215ENST00000600910 TRIM6-TRIM34B2RNG4 842 aa24.87■■□□□ 1.57
PNKP-215ENST00000600910 FBXW7Q969H0 707 aa24.87■■□□□ 1.57
PNKP-215ENST00000600910 BMP2KLQ5H9B9 411 aa24.86■■□□□ 1.57
PNKP-215ENST00000600910 TTLL5Q6EMB2 1281 aa24.86■■□□□ 1.57
PNKP-215ENST00000600910 FAM205AQ6ZU69 1335 aa24.86■■□□□ 1.57
PNKP-215ENST00000600910 TBC1D9Q6ZT07 1266 aa24.86■■□□□ 1.57
PNKP-215ENST00000600910 WDR66Q8TBY9 1149 aa24.86■■□□□ 1.57
PNKP-215ENST00000600910 RILPL2Q969X0 211 aa24.86■■□□□ 1.57
PNKP-215ENST00000600910 RNF181Q9P0P0 153 aa24.86■■□□□ 1.57
PNKP-215ENST00000600910 DICER1Q9UPY3 1922 aaKnown RBP24.86■■□□□ 1.57
PNKP-215ENST00000600910 SDSP20132 328 aa24.85■■□□□ 1.57
PNKP-215ENST00000600910 CNTROBQ8N137 903 aa24.85■■□□□ 1.57
PNKP-215ENST00000600910 USP17L3A6NCW0 530 aa24.84■■□□□ 1.57
PNKP-215ENST00000600910 USP17L4A6NCW7 530 aa24.84■■□□□ 1.57
PNKP-215ENST00000600910 RAD17O75943 681 aa24.84■■□□□ 1.57
PNKP-215ENST00000600910 TTF1Q15361 905 aaPredicted RBP24.84■■□□□ 1.57
PNKP-215ENST00000600910 STRIP1Q5VSL9 837 aa24.84■■□□□ 1.57
PNKP-215ENST00000600910 USP17L1Q7RTZ2 530 aa24.84■■□□□ 1.57
PNKP-215ENST00000600910 EVI5LQ96CN4 794 aa24.84■■□□□ 1.57
PNKP-215ENST00000600910 PIH1D3Q9NQM4 214 aaKnown RBP24.84■■□□□ 1.57
PNKP-215ENST00000600910 ABCF2Q9UG63 623 aa24.84■■□□□ 1.57
PNKP-215ENST00000600910 C9orf131Q5VYM1 1079 aa24.83■■□□□ 1.57
PNKP-215ENST00000600910 SALL1Q9NSC2 1324 aa24.83■■□□□ 1.57
PNKP-215ENST00000600910 ZNF646O15015 1829 aaPredicted RBP24.83■■□□□ 1.56
PNKP-215ENST00000600910 PSME4Q14997 1843 aa24.83■■□□□ 1.56
PNKP-215ENST00000600910 FZD9O00144 591 aa24.83■■□□□ 1.56
PNKP-215ENST00000600910 MFSD14BQ5SR56 506 aa24.83■■□□□ 1.56
PNKP-215ENST00000600910 TBC1D22AQ8WUA7 517 aa24.83■■□□□ 1.56
PNKP-215ENST00000600910 DCAF8L1A6NGE4 600 aa24.82■■□□□ 1.56
PNKP-215ENST00000600910 CXCL9Q07325 125 aa24.82■■□□□ 1.56
PNKP-215ENST00000600910 DACT2Q5SW24 774 aa24.82■■□□□ 1.56
PNKP-215ENST00000600910 ZGPATQ8N5A5 531 aaKnown RBP24.82■■□□□ 1.56
PNKP-215ENST00000600910 KBTBD3Q8NAB2 608 aa24.82■■□□□ 1.56
PNKP-215ENST00000600910 MXD3Q9BW11 206 aa24.82■■□□□ 1.56
PNKP-215ENST00000600910 PSMD14O00487 310 aa24.81■■□□□ 1.56
PNKP-215ENST00000600910 TIAM2Q8IVF5 1701 aa24.81■■□□□ 1.56
PNKP-215ENST00000600910 FSD1Q9BTV5 496 aa24.81■■□□□ 1.56
PNKP-215ENST00000600910 LRP2BPQ9P2M1 347 aa24.81■■□□□ 1.56
PNKP-215ENST00000600910 MYO5AQ9Y4I1 1855 aaKnown RBP24.8■■□□□ 1.56
PNKP-215ENST00000600910 IDH1O75874 414 aaKnown RBP24.8■■□□□ 1.56
PNKP-215ENST00000600910 PRDX5P30044 214 aa24.8■■□□□ 1.56
PNKP-215ENST00000600910 EIF6P56537 245 aaKnown RBP24.8■■□□□ 1.56
PNKP-215ENST00000600910 CERS5Q8N5B7 392 aa24.8■■□□□ 1.56
PNKP-215ENST00000600910 AK9Q5TCS8 1911 aa24.8■■□□□ 1.56
PNKP-215ENST00000600910 DOCK2Q92608 1830 aa24.8■■□□□ 1.56
PNKP-215ENST00000600910 CIAPIN1Q6FI81 312 aa24.79■■□□□ 1.56
PNKP-215ENST00000600910 VIL1P09327 827 aaKnown RBP24.79■■□□□ 1.56
PNKP-215ENST00000600910 FKBP1AP62942 108 aaKnown RBP24.79■■□□□ 1.56
PNKP-215ENST00000600910 GRIK5Q16478 980 aa24.79■■□□□ 1.56
PNKP-215ENST00000600910 ERICH6Q7L0X2 663 aa24.79■■□□□ 1.56
PNKP-215ENST00000600910 ZNF541Q9H0D2 1346 aa24.78■■□□□ 1.56
PNKP-215ENST00000600910 LDHBP07195 334 aaKnown RBP24.78■■□□□ 1.56
PNKP-215ENST00000600910 TNIP1Q15025 636 aa24.78■■□□□ 1.56
PNKP-215ENST00000600910 SPTY2D1Q68D10 685 aaPredicted RBP24.78■■□□□ 1.56
PNKP-215ENST00000600910 RAI14Q9P0K7 980 aa24.78■■□□□ 1.56
PNKP-215ENST00000600910 MAP3K12Q12852 859 aa24.77■■□□□ 1.56
PNKP-215ENST00000600910 RSBN1LQ6PCB5 846 aaPredicted RBP24.77■■□□□ 1.56
PNKP-215ENST00000600910 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.76■■□□□ 1.552e-7■■■■■ 30.6
PNKP-215ENST00000600910 SUGT1Q9Y2Z0 365 aa24.75■■□□□ 1.55
PNKP-215ENST00000600910 ZBTB12Q9Y330 459 aaPredicted RBP24.75■■□□□ 1.55
PNKP-215ENST00000600910 MYO3BQ8WXR4 1341 aa24.75■■□□□ 1.55
PNKP-215ENST00000600910 CHGBP05060 677 aa24.75■■□□□ 1.55
PNKP-215ENST00000600910 SLC9C2Q5TAH2 1124 aa24.75■■□□□ 1.55
PNKP-215ENST00000600910 GJA3Q9Y6H8 435 aa24.75■■□□□ 1.55
PNKP-215ENST00000600910 F8W031 263 aaPredicted RBP24.74■■□□□ 1.55
PNKP-215ENST00000600910 MECOMQ03112 1051 aa24.74■■□□□ 1.55
PNKP-215ENST00000600910 DZIP1Q86YF9 867 aaKnown RBP24.74■■□□□ 1.55
PNKP-215ENST00000600910 KIAA0825Q8IV33 1275 aa24.74■■□□□ 1.55
PNKP-215ENST00000600910 NSUN4Q96CB9 384 aaKnown RBP24.74■■□□□ 1.55
PNKP-215ENST00000600910 MYH7P12883 1935 aa24.74■■□□□ 1.55
PNKP-215ENST00000600910 RFX7Q2KHR2 1363 aa24.74■■□□□ 1.55
PNKP-215ENST00000600910 LRRFIP1Q32MZ4 808 aaKnown RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms