RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 ANKIB1Q9P2G1 1089 aa23.95■■□□□ 1.42
PNKP-214ENST00000600573 COL4A1P02462 1669 aa23.94■■□□□ 1.42
PNKP-214ENST00000600573 NRXN2Q9P2S2 1712 aa23.94■■□□□ 1.42
PNKP-214ENST00000600573 IDH1O75874 414 aaKnown RBP23.94■■□□□ 1.42
PNKP-214ENST00000600573 NPR1P16066 1061 aa23.94■■□□□ 1.42
PNKP-214ENST00000600573 ATP2B4P23634 1241 aa23.94■■□□□ 1.42
PNKP-214ENST00000600573 ALDH1B1P30837 517 aa23.94■■□□□ 1.42
PNKP-214ENST00000600573 ZSWIM6Q9HCJ5 1215 aa23.94■■□□□ 1.42
PNKP-214ENST00000600573 FOXD4L1Q9NU39 408 aa23.94■■□□□ 1.42
PNKP-214ENST00000600573 HSPD1P10809 573 aaKnown RBP23.93■■□□□ 1.42
PNKP-214ENST00000600573 GYG1P46976 350 aa23.93■■□□□ 1.42
PNKP-214ENST00000600573 CYP46A1Q9Y6A2 500 aa23.93■■□□□ 1.42
PNKP-214ENST00000600573 PDE6AP16499 860 aa23.92■■□□□ 1.42
PNKP-214ENST00000600573 CCDC129Q6ZRS4 1044 aa23.92■■□□□ 1.42
PNKP-214ENST00000600573 PODXL2Q9NZ53 605 aa23.92■■□□□ 1.42
PNKP-214ENST00000600573 VPS53Q5VIR6 699 aa23.92■■□□□ 1.42
PNKP-214ENST00000600573 SP8Q8IXZ3 490 aa23.92■■□□□ 1.42
PNKP-214ENST00000600573 UPF3BQ9BZI7 483 aaKnown RBP23.92■■□□□ 1.42
PNKP-214ENST00000600573 CWC22Q9HCG8 908 aaKnown RBP23.92■■□□□ 1.42
PNKP-214ENST00000600573 QSER1Q2KHR3 1735 aa23.91■■□□□ 1.42
PNKP-214ENST00000600573 M0R2C6 588 aa23.91■■□□□ 1.42
PNKP-214ENST00000600573 SRGNP10124 158 aa23.91■■□□□ 1.42
PNKP-214ENST00000600573 JAKMIP1Q96N16 626 aaKnown RBP23.91■■□□□ 1.42
PNKP-214ENST00000600573 ALDH8A1Q9H2A2 487 aaPredicted RBP23.91■■□□□ 1.42
PNKP-214ENST00000600573 ANO8Q9HCE9 1232 aaPredicted RBP23.91■■□□□ 1.42
PNKP-214ENST00000600573 HMGB1P09429 215 aaKnown RBP23.9■■□□□ 1.42
PNKP-214ENST00000600573 RAB3GAP1Q15042 981 aa23.9■■□□□ 1.42
PNKP-214ENST00000600573 RUFY3Q7L099 469 aa23.9■■□□□ 1.42
PNKP-214ENST00000600573 TMX3Q96JJ7 454 aa23.9■■□□□ 1.42
PNKP-214ENST00000600573 LRP2BPQ9P2M1 347 aa23.9■■□□□ 1.42
PNKP-214ENST00000600573 ZNF532Q9HCE3 1301 aa23.9■■□□□ 1.42
PNKP-214ENST00000600573 TCRBV5S4A2TA0A5A2 114 aa23.89■■□□□ 1.42
PNKP-214ENST00000600573 CHGBP05060 677 aa23.89■■□□□ 1.42
PNKP-214ENST00000600573 CASTP20810 708 aaKnown RBP23.89■■□□□ 1.42
PNKP-214ENST00000600573 SLC16A10Q8TF71 515 aa23.89■■□□□ 1.42
PNKP-214ENST00000600573 MASTLQ96GX5 879 aa23.89■■□□□ 1.42
PNKP-214ENST00000600573 PUS7LQ9H0K6 701 aaKnown RBP23.89■■□□□ 1.42
PNKP-214ENST00000600573 IRS2Q9Y4H2 1338 aa23.89■■□□□ 1.41
PNKP-214ENST00000600573 TAF1P21675 1872 aa23.89■■□□□ 1.41
PNKP-214ENST00000600573 RPAP1Q9BWH6 1393 aaPredicted RBP23.89■■□□□ 1.41
PNKP-214ENST00000600573 GPAA1O43292 621 aa23.88■■□□□ 1.41
PNKP-214ENST00000600573 ANKRD1Q15327 319 aa23.88■■□□□ 1.41
PNKP-214ENST00000600573 DEFB132Q7Z7B7 95 aa23.88■■□□□ 1.41
PNKP-214ENST00000600573 ZGPATQ8N5A5 531 aaKnown RBP23.88■■□□□ 1.41
PNKP-214ENST00000600573 TTC14Q96N46 770 aa23.88■■□□□ 1.41
PNKP-214ENST00000600573 TMX4Q9H1E5 349 aaPredicted RBP23.88■■□□□ 1.41
PNKP-214ENST00000600573 GGA1Q9UJY5 639 aa23.88■■□□□ 1.41
PNKP-214ENST00000600573 GNAT2P19087 354 aa23.88■■□□□ 1.41
PNKP-214ENST00000600573 CUL4AQ13619 759 aa23.88■■□□□ 1.41
PNKP-214ENST00000600573 BLOC1S2Q6QNY1 142 aa23.88■■□□□ 1.41
PNKP-214ENST00000600573 ZNF804AQ7Z570 1209 aa23.88■■□□□ 1.41
PNKP-214ENST00000600573 ATP6V0A2Q9Y487 856 aa23.88■■□□□ 1.41
PNKP-214ENST00000600573 MAGEB6Q8N7X4 407 aa23.87■■□□□ 1.41
PNKP-214ENST00000600573 AIDAQ96BJ3 306 aa23.87■■□□□ 1.41
PNKP-214ENST00000600573 INTS4Q96HW7 963 aaKnown RBP23.87■■□□□ 1.41
PNKP-214ENST00000600573 PDRG1Q9NUG6 133 aa23.87■■□□□ 1.41
PNKP-214ENST00000600573 WWC3Q9ULE0 1092 aa23.87■■□□□ 1.41
PNKP-214ENST00000600573 PPEF1O14829 653 aaPredicted RBP23.86■■□□□ 1.41
PNKP-214ENST00000600573 GPSM2P81274 684 aa23.86■■□□□ 1.41
PNKP-214ENST00000600573 SLFNL1Q499Z3 407 aa23.86■■□□□ 1.41
PNKP-214ENST00000600573 SPTY2D1Q68D10 685 aaPredicted RBP23.86■■□□□ 1.41
PNKP-214ENST00000600573 ZSCAN31Q96LW9 406 aaPredicted RBP23.86■■□□□ 1.41
PNKP-214ENST00000600573 NSFL1CQ9UNZ2 370 aaKnown RBP23.86■■□□□ 1.41
PNKP-214ENST00000600573 DOCK2Q92608 1830 aa23.86■■□□□ 1.41
PNKP-214ENST00000600573 CYP21A2P08686 494 aa23.85■■□□□ 1.41
PNKP-214ENST00000600573 NUCB2P80303 420 aa23.85■■□□□ 1.41
PNKP-214ENST00000600573 ADCK5Q3MIX3 580 aa23.85■■□□□ 1.41
PNKP-214ENST00000600573 STYK1Q6J9G0 422 aa23.85■■□□□ 1.41
PNKP-214ENST00000600573 NEK1Q96PY6 1258 aa23.85■■□□□ 1.41
PNKP-214ENST00000600573 LIMCH1Q9UPQ0 1083 aa23.85■■□□□ 1.41
PNKP-214ENST00000600573 ALX1Q15699 326 aa23.84■■□□□ 1.41
PNKP-214ENST00000600573 IMMTQ16891 758 aaKnown RBP23.84■■□□□ 1.41
PNKP-214ENST00000600573 WDR66Q8TBY9 1149 aa23.84■■□□□ 1.41
PNKP-214ENST00000600573 SALL1Q9NSC2 1324 aa23.84■■□□□ 1.41
PNKP-214ENST00000600573 MCM4P33991 863 aa23.84■■□□□ 1.41
PNKP-214ENST00000600573 TDRD7Q8NHU6 1098 aaKnown RBP23.84■■□□□ 1.41
PNKP-214ENST00000600573 GBP4Q96PP9 640 aa23.84■■□□□ 1.41
PNKP-214ENST00000600573 STRBPQ96SI9 672 aaKnown RBP23.84■■□□□ 1.41
PNKP-214ENST00000600573 ABCF2Q9UG63 623 aa23.84■■□□□ 1.41
PNKP-214ENST00000600573 ZMYM6O95789 1325 aa23.84■■□□□ 1.41
PNKP-214ENST00000600573 WTIPA6NIX2 430 aaPredicted RBP23.83■■□□□ 1.41
PNKP-214ENST00000600573 PATL2C9JE40 543 aaKnown RBP23.83■■□□□ 1.41
PNKP-214ENST00000600573 H0YIN7 160 aa23.83■■□□□ 1.41
PNKP-214ENST00000600573 UFL1O94874 794 aa23.83■■□□□ 1.41
PNKP-214ENST00000600573 RPS6KB1P23443 525 aa23.83■■□□□ 1.41
PNKP-214ENST00000600573 MSL1Q68DK7 614 aa23.83■■□□□ 1.41
PNKP-214ENST00000600573 NOL8Q76FK4 1167 aaKnown RBP23.83■■□□□ 1.41
PNKP-214ENST00000600573 TNPO1Q92973 898 aaKnown RBP23.83■■□□□ 1.41
PNKP-214ENST00000600573 SH2B1Q9NRF2 756 aaPredicted RBP23.83■■□□□ 1.41
PNKP-214ENST00000600573 RAI14Q9P0K7 980 aa23.83■■□□□ 1.41
PNKP-214ENST00000600573 DDX11L8A8MPP1 907 aa23.82■■□□□ 1.4
PNKP-214ENST00000600573 AK2P54819 239 aa23.82■■□□□ 1.4
PNKP-214ENST00000600573 FGAP02671 866 aa23.81■■□□□ 1.4
PNKP-214ENST00000600573 KLRK1P26718 216 aa23.81■■□□□ 1.4
PNKP-214ENST00000600573 TBC1D16Q8TBP0 767 aa23.81■■□□□ 1.4
PNKP-214ENST00000600573 IQSEC3Q9UPP2 1182 aaPredicted RBP23.81■■□□□ 1.4
PNKP-214ENST00000600573 MYO5AQ9Y4I1 1855 aaKnown RBP23.81■■□□□ 1.4
PNKP-214ENST00000600573 LAMA4Q16363 1823 aa23.81■■□□□ 1.4
PNKP-214ENST00000600573 C2CD5Q86YS7 1000 aa23.81■■□□□ 1.4
PNKP-214ENST00000600573 UPF1Q92900 1129 aaKnown RBP eCLIP23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms